RNA–Protein interactions for RNA: ENST00000272371.6

OTOF-201, Transcript of otoferlin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene OTOF, Length 7,156 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-201ENST00000272371 TMEM249Q2WGJ8 235 aa9.05□□□□□ -0.96
OTOF-201ENST00000272371 UNQ9370/PRO34162Q6UXP9 181 aa9.05□□□□□ -0.96
OTOF-201ENST00000272371 LINC00305Q7Z4B0 112 aa9.05□□□□□ -0.96
OTOF-201ENST00000272371 ZNF479Q96JC4 524 aa9.05□□□□□ -0.96
OTOF-201ENST00000272371 TRAV5A0A0B4J249 113 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 PATE3B3GLJ2 98 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 HRKO00198 91 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 ZIC3O60481 467 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 SSBP2P81877 361 aaPredicted RBP9.04□□□□□ -0.96
OTOF-201ENST00000272371 SPRED2Q7Z698 418 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 LRTM2Q8N967 370 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 TNS1Q9HBL0 1735 aaKnown RBP9.04□□□□□ -0.96
OTOF-201ENST00000272371 UPK3AO75631 287 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 C1QCP02747 245 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 GPX1P07203 203 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 TMEM196Q5HYL7 178 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 GCSAMQ8N6F7 178 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 ST20Q9HBF5 79 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 TRAV14DV4A0A0A6YYC5 116 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 CGAP01215 116 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 ZP4Q12836 540 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 TPRX1Q8N7U7 411 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 FMC1Q96HJ9 113 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 TRIOBPQ9H2D6 2365 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 TRAV17A0A0B4J275 112 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.04□□□□□ -0.96
OTOF-201ENST00000272371 CFHR1Q03591 330 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 ICAM4Q14773 271 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 UCN2Q96RP3 112 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 IL6RP08887 468 aaPredicted RBP9.04□□□□□ -0.96
OTOF-201ENST00000272371 HSPE1P61604 102 aaKnown RBP9.04□□□□□ -0.96
OTOF-201ENST00000272371 UBE2V1Q13404 147 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 RNASEH2CQ8TDP1 164 aaKnown RBP9.04□□□□□ -0.96
OTOF-201ENST00000272371 FAM90A10PA6NDY2 464 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 FAM90A18PA6NE21 464 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 FAM90A16PA6NEW6 464 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 FAM90A20PA6NIJ5 464 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 FAM90A8PA6NJQ4 464 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 FAM90A7PA6NKC0 464 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 FAM90A22PA8MWA6 464 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 FAM90A12PA8MX19 464 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 FAM90A5PA8MXJ8 464 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 FAM90A23PA8MXZ1 464 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 FAM90A15PP0C7V4 464 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 FAM90A13PP0C7W8 464 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 FAM90A14PP0C7W9 464 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 FAM90A24PP0C7X0 464 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 ATP5G3P48201 142 aa9.04□□□□□ -0.96
OTOF-201ENST00000272371 TRAV30A0A087WSZ9 112 aa9.03□□□□□ -0.96
OTOF-201ENST00000272371 A0A1B0GW15 77 aa9.03□□□□□ -0.96
OTOF-201ENST00000272371 H3BRM9 83 aa9.03□□□□□ -0.96
OTOF-201ENST00000272371 MC5RP33032 325 aa9.03□□□□□ -0.96
OTOF-201ENST00000272371 SPINK14Q6IE38 97 aa9.03□□□□□ -0.96
OTOF-201ENST00000272371 ABHD12Q8N2K0 398 aa9.03□□□□□ -0.96
OTOF-201ENST00000272371 TMEM101Q96IK0 257 aa9.03□□□□□ -0.96
OTOF-201ENST00000272371 ZNF146Q15072 292 aa9.03□□□□□ -0.96
OTOF-201ENST00000272371 CCDC144NLQ6NUI1 221 aa9.03□□□□□ -0.96
OTOF-201ENST00000272371 ORMDL3Q8N138 153 aa9.03□□□□□ -0.96
OTOF-201ENST00000272371 RSPO3Q9BXY4 272 aaPredicted RBP9.03□□□□□ -0.96
OTOF-201ENST00000272371 MYOFQ9NZM1 2061 aa9.03□□□□□ -0.96
OTOF-201ENST00000272371 ZNF562Q6V9R5 426 aa9.03□□□□□ -0.96
OTOF-201ENST00000272371 MDP1Q86V88 176 aa9.03□□□□□ -0.96
OTOF-201ENST00000272371 COX11Q9Y6N1 276 aa9.03□□□□□ -0.96
OTOF-201ENST00000272371 RNF222A6NCQ9 220 aa9.03□□□□□ -0.96
OTOF-201ENST00000272371 PIN1P1O15428 100 aa9.03□□□□□ -0.96
OTOF-201ENST00000272371 MFAP4P55083 255 aa9.03□□□□□ -0.96
OTOF-201ENST00000272371 WDR82Q6UXN9 313 aa9.03□□□□□ -0.96
OTOF-201ENST00000272371 RP1P56715 2156 aa9.03□□□□□ -0.96
OTOF-201ENST00000272371 A0A0G2JLM5 398 aa9.03□□□□□ -0.96
OTOF-201ENST00000272371 CENPVL1A0A0U1RR11 272 aa9.03□□□□□ -0.96
OTOF-201ENST00000272371 KBTBD11-OT1A0A1B0GTJ5 212 aa9.03□□□□□ -0.96
OTOF-201ENST00000272371 HIGD1CA8MV81 97 aa9.03□□□□□ -0.96
OTOF-201ENST00000272371 REG1AP05451 166 aa9.03□□□□□ -0.96
OTOF-201ENST00000272371 TSPOP30536 169 aa9.03□□□□□ -0.96
OTOF-201ENST00000272371 TFF3Q07654 80 aa9.03□□□□□ -0.96
OTOF-201ENST00000272371 C3AR1Q16581 482 aa9.03□□□□□ -0.96
OTOF-201ENST00000272371 C1orf194Q5T5A4 169 aa9.03□□□□□ -0.96
OTOF-201ENST00000272371 RASL10BQ96S79 203 aa9.03□□□□□ -0.96
OTOF-201ENST00000272371 PLSCR4Q9NRQ2 329 aa9.03□□□□□ -0.96
OTOF-201ENST00000272371 PSMB11A5LHX3 300 aa9.02□□□□□ -0.96
OTOF-201ENST00000272371 DPM2O94777 84 aa9.02□□□□□ -0.96
OTOF-201ENST00000272371 ERVK11-1P61568 191 aa9.02□□□□□ -0.96
OTOF-201ENST00000272371 ICE1Q9Y2F5 2266 aa9.02□□□□□ -0.97
OTOF-201ENST00000272371 FOXI3A8MTJ6 420 aaPredicted RBP9.02□□□□□ -0.97
OTOF-201ENST00000272371 GFI1BQ5VTD9 330 aa9.02□□□□□ -0.97
OTOF-201ENST00000272371 TUBGCP6Q96RT7 1819 aa9.02□□□□□ -0.97
OTOF-201ENST00000272371 AMBPP02760 352 aa9.02□□□□□ -0.97
OTOF-201ENST00000272371 PRTN3P24158 256 aa9.02□□□□□ -0.97
OTOF-201ENST00000272371 ZNF658BQ4V348 819 aaPredicted RBP9.02□□□□□ -0.97
OTOF-201ENST00000272371 VKORC1L1Q8N0U8 176 aa9.02□□□□□ -0.97
OTOF-201ENST00000272371 DDB2Q92466 427 aa9.02□□□□□ -0.97
OTOF-201ENST00000272371 COX14Q96I36 57 aa9.02□□□□□ -0.97
OTOF-201ENST00000272371 NCOR1P1Q9H4R4 102 aa9.02□□□□□ -0.97
OTOF-201ENST00000272371 MYO16Q9Y6X6 1858 aa9.02□□□□□ -0.97
OTOF-201ENST00000272371 HOXC4P09017 264 aaPredicted RBP9.02□□□□□ -0.97
OTOF-201ENST00000272371 IL11P20809 199 aa9.02□□□□□ -0.97
OTOF-201ENST00000272371 LIMS2Q7Z4I7 341 aa9.02□□□□□ -0.97
OTOF-201ENST00000272371 SLC25A53Q5H9E4 307 aa9.02□□□□□ -0.97
OTOF-201ENST00000272371 LHFPL4Q7Z7J7 247 aa9.02□□□□□ -0.97
OTOF-201ENST00000272371 C1QL4Q86Z23 238 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms