RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 HIST1H2BDP58876 126 aa10.23□□□□□ -0.77
CAPN9-201ENST00000271971 HIST1H2BCP62807 126 aa10.23□□□□□ -0.77
CAPN9-201ENST00000271971 HIST2H2BEQ16778 126 aa10.23□□□□□ -0.77
CAPN9-201ENST00000271971 ZNF674Q2M3X9 581 aa10.23□□□□□ -0.77
CAPN9-201ENST00000271971 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.23□□□□□ -0.77
CAPN9-201ENST00000271971 SLC25A48Q6ZT89 311 aaKnown RBP10.23□□□□□ -0.77
CAPN9-201ENST00000271971 HIST1H2BHQ93079 126 aa10.23□□□□□ -0.77
CAPN9-201ENST00000271971 RAB39BQ96DA2 213 aa10.23□□□□□ -0.77
CAPN9-201ENST00000271971 HIST1H2BNQ99877 126 aa10.23□□□□□ -0.77
CAPN9-201ENST00000271971 HIST1H2BMQ99879 126 aa10.23□□□□□ -0.77
CAPN9-201ENST00000271971 PRO1933Q9H354 126 aa10.23□□□□□ -0.77
CAPN9-201ENST00000271971 KIAA1456Q9P272 454 aa10.23□□□□□ -0.77
CAPN9-201ENST00000271971 PPIAL4CA0A0B4J2A2 164 aa10.22□□□□□ -0.77
CAPN9-201ENST00000271971 B4DEV8 164 aa10.22□□□□□ -0.77
CAPN9-201ENST00000271971 TSTD3H0UI37 97 aa10.22□□□□□ -0.77
CAPN9-201ENST00000271971 SRP19P09132 144 aaKnown RBP10.22□□□□□ -0.77
CAPN9-201ENST00000271971 PPIAL4GP0DN37 164 aa10.22□□□□□ -0.77
CAPN9-201ENST00000271971 IGHV1-8P0DP01 117 aa10.22□□□□□ -0.77
CAPN9-201ENST00000271971 MSMO1Q15800 293 aa10.22□□□□□ -0.77
CAPN9-201ENST00000271971 TMEM30BQ3MIR4 351 aa10.22□□□□□ -0.77
CAPN9-201ENST00000271971 SLC35E3Q7Z769 313 aa10.22□□□□□ -0.77
CAPN9-201ENST00000271971 ZNF295-AS1Q8N0V1 137 aa10.22□□□□□ -0.77
CAPN9-201ENST00000271971 Q8WTZ3 238 aa10.22□□□□□ -0.77
CAPN9-201ENST00000271971 IL22RA2Q969J5 263 aa10.22□□□□□ -0.77
CAPN9-201ENST00000271971 HSD17B10Q99714 261 aaKnown RBP10.22□□□□□ -0.77
CAPN9-201ENST00000271971 SSX3Q99909 188 aa10.22□□□□□ -0.77
CAPN9-201ENST00000271971 SSBP3Q9BWW4 388 aaPredicted RBP10.22□□□□□ -0.77
CAPN9-201ENST00000271971 GPR61Q9BZJ8 451 aa10.22□□□□□ -0.77
CAPN9-201ENST00000271971 MMP24Q9Y5R2 645 aa10.22□□□□□ -0.77
CAPN9-201ENST00000271971 ITGB1BP1O14713 200 aa10.22□□□□□ -0.77
CAPN9-201ENST00000271971 HSPB1P04792 205 aaKnown RBP10.22□□□□□ -0.77
CAPN9-201ENST00000271971 TAGLN2P37802 199 aaKnown RBP10.22□□□□□ -0.77
CAPN9-201ENST00000271971 FHITP49789 147 aa10.22□□□□□ -0.77
CAPN9-201ENST00000271971 KHDC3LQ587J8 217 aa10.22□□□□□ -0.77
CAPN9-201ENST00000271971 ZNF66Q6ZN08 573 aa10.22□□□□□ -0.77
CAPN9-201ENST00000271971 OR10A7Q8NGE5 316 aa10.22□□□□□ -0.77
CAPN9-201ENST00000271971 OR10G4Q8NGN3 311 aa10.22□□□□□ -0.77
CAPN9-201ENST00000271971 GPR146Q96CH1 333 aa10.22□□□□□ -0.77
CAPN9-201ENST00000271971 RCC1LQ96I51 464 aaKnown RBP10.22□□□□□ -0.77
CAPN9-201ENST00000271971 ONECUT1Q9UBC0 465 aa10.22□□□□□ -0.77
CAPN9-201ENST00000271971 CLEC18AA5D8T8 446 aa10.21□□□□□ -0.77
CAPN9-201ENST00000271971 RAB29O14966 203 aa10.21□□□□□ -0.77
CAPN9-201ENST00000271971 FCGR3BO75015 233 aa10.21□□□□□ -0.77
CAPN9-201ENST00000271971 CXCL1P09341 107 aa10.21□□□□□ -0.77
CAPN9-201ENST00000271971 G6PCP35575 357 aa10.21□□□□□ -0.77
CAPN9-201ENST00000271971 UBE2KP61086 200 aa10.21□□□□□ -0.77
CAPN9-201ENST00000271971 ZNF506Q5JVG8 444 aa10.21□□□□□ -0.77
CAPN9-201ENST00000271971 SPSB3Q6PJ21 355 aa10.21□□□□□ -0.77
CAPN9-201ENST00000271971 CLEC9AQ6UXN8 241 aa10.21□□□□□ -0.77
CAPN9-201ENST00000271971 Q6ZRM9 215 aa10.21□□□□□ -0.77
CAPN9-201ENST00000271971 CLEC18CQ8NCF0 446 aa10.21□□□□□ -0.77
CAPN9-201ENST00000271971 OR4D5Q8NGN0 318 aa10.21□□□□□ -0.77
CAPN9-201ENST00000271971 FAM213BQ8TBF2 198 aa10.21□□□□□ -0.77
CAPN9-201ENST00000271971 TVP23CQ96ET8 276 aa10.21□□□□□ -0.77
CAPN9-201ENST00000271971 DUXBA0A1W2PPF3 345 aa10.21□□□□□ -0.78
CAPN9-201ENST00000271971 ZNF727A8MUV8 499 aa10.21□□□□□ -0.78
CAPN9-201ENST00000271971 ST8SIA3O43173 380 aa10.21□□□□□ -0.78
CAPN9-201ENST00000271971 KRASP01116 189 aa10.21□□□□□ -0.78
CAPN9-201ENST00000271971 RELQ04864 619 aaPredicted RBP10.21□□□□□ -0.78
CAPN9-201ENST00000271971 FAM216AQ8WUB2 273 aa10.21□□□□□ -0.78
CAPN9-201ENST00000271971 SH3BGRL3Q9H299 93 aa10.21□□□□□ -0.78
CAPN9-201ENST00000271971 C11orf1Q9H5F2 150 aa10.21□□□□□ -0.78
CAPN9-201ENST00000271971 TMEM242Q9NWH2 141 aa10.21□□□□□ -0.78
CAPN9-201ENST00000271971 CSMD1Q96PZ7 3565 aa10.2□□□□□ -0.78
CAPN9-201ENST00000271971 REG1BP48304 166 aa10.2□□□□□ -0.78
CAPN9-201ENST00000271971 DIAPH2-AS1Q14236 149 aa10.2□□□□□ -0.78
CAPN9-201ENST00000271971 ZNF266Q14584 549 aa10.2□□□□□ -0.78
CAPN9-201ENST00000271971 CXorf66Q5JRM2 361 aaPredicted RBP10.2□□□□□ -0.78
CAPN9-201ENST00000271971 TGIF2LXQ8IUE1 241 aa10.2□□□□□ -0.78
CAPN9-201ENST00000271971 C8orf46Q8TAG6 207 aa10.2□□□□□ -0.78
CAPN9-201ENST00000271971 PERPQ96FX8 193 aa10.2□□□□□ -0.78
CAPN9-201ENST00000271971 RARRES2Q99969 163 aa10.2□□□□□ -0.78
CAPN9-201ENST00000271971 MAGT1Q9H0U3 335 aa10.2□□□□□ -0.78
CAPN9-201ENST00000271971 CACNG5Q9UF02 275 aa10.2□□□□□ -0.78
CAPN9-201ENST00000271971 GCN1Q92616 2671 aaKnown RBP10.2□□□□□ -0.78
CAPN9-201ENST00000271971 CELSR1Q9NYQ6 3014 aa10.2□□□□□ -0.78
CAPN9-201ENST00000271971 TCAPO15273 167 aa10.19□□□□□ -0.78
CAPN9-201ENST00000271971 ZFP36P26651 326 aaKnown RBP10.19□□□□□ -0.78
CAPN9-201ENST00000271971 RND2P52198 227 aa10.19□□□□□ -0.78
CAPN9-201ENST00000271971 ATP5J2P56134 94 aa10.19□□□□□ -0.78
CAPN9-201ENST00000271971 ZNF343Q6P1L6 599 aa10.19□□□□□ -0.78
CAPN9-201ENST00000271971 DPPA3Q6W0C5 159 aa10.19□□□□□ -0.78
CAPN9-201ENST00000271971 LY6G5BQ8NDX9 201 aa10.19□□□□□ -0.78
CAPN9-201ENST00000271971 OR10X1Q8NGY0 326 aa10.19□□□□□ -0.78
CAPN9-201ENST00000271971 SPIN2AQ99865 258 aa10.19□□□□□ -0.78
CAPN9-201ENST00000271971 SPIN2BQ9BPZ2 258 aa10.19□□□□□ -0.78
CAPN9-201ENST00000271971 TMEM133Q9H2Q1 129 aa10.19□□□□□ -0.78
CAPN9-201ENST00000271971 RCL1Q9Y2P8 373 aaKnown RBP10.19□□□□□ -0.78
CAPN9-201ENST00000271971 LOC105371242A0A075B767 164 aa10.19□□□□□ -0.78
CAPN9-201ENST00000271971 J3QKU1 62 aa10.19□□□□□ -0.78
CAPN9-201ENST00000271971 J3QR06 171 aa10.19□□□□□ -0.78
CAPN9-201ENST00000271971 PITX3O75364 302 aa10.19□□□□□ -0.78
CAPN9-201ENST00000271971 LIPFP07098 398 aa10.19□□□□□ -0.78
CAPN9-201ENST00000271971 COX7A1P24310 79 aa10.19□□□□□ -0.78
CAPN9-201ENST00000271971 ARF6P62330 175 aa10.19□□□□□ -0.78
CAPN9-201ENST00000271971 DLK1P80370 383 aa10.19□□□□□ -0.78
CAPN9-201ENST00000271971 PDZD11Q5EBL8 140 aa10.19□□□□□ -0.78
CAPN9-201ENST00000271971 TMEM182Q6ZP80 229 aaPredicted RBP10.19□□□□□ -0.78
CAPN9-201ENST00000271971 ZNF429Q86V71 674 aa10.19□□□□□ -0.78
CAPN9-201ENST00000271971 ABHD12Q8N2K0 398 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms