RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 LINC00869P0C866 280 aa10.28□□□□□ -0.76
ERBB2-201ENST00000269571 ADMP35318 185 aa10.28□□□□□ -0.76
ERBB2-201ENST00000269571 LYZP61626 148 aa10.28□□□□□ -0.76
ERBB2-201ENST00000269571 RPL31P62899 125 aaKnown RBP10.28□□□□□ -0.76
ERBB2-201ENST00000269571 LYRM7Q5U5X0 104 aa10.28□□□□□ -0.76
ERBB2-201ENST00000269571 FBXW9Q5XUX1 488 aa10.28□□□□□ -0.76
ERBB2-201ENST00000269571 DRAM1Q8N682 238 aa10.28□□□□□ -0.76
ERBB2-201ENST00000269571 SCARF2Q96GP6 870 aaPredicted RBP10.28□□□□□ -0.76
ERBB2-201ENST00000269571 TMEM70Q9BUB7 260 aa10.28□□□□□ -0.76
ERBB2-201ENST00000269571 ONECUT1Q9UBC0 465 aa10.28□□□□□ -0.76
ERBB2-201ENST00000269571 A0A1B0GW64 132 aa10.27□□□□□ -0.76
ERBB2-201ENST00000269571 hADV38S2A0JD32 116 aa10.27□□□□□ -0.76
ERBB2-201ENST00000269571 H3BTX0 84 aa10.27□□□□□ -0.76
ERBB2-201ENST00000269571 HLA-DRB1P01911 266 aa10.27□□□□□ -0.76
ERBB2-201ENST00000269571 FAM166AQ6J272 317 aa10.27□□□□□ -0.76
ERBB2-201ENST00000269571 C1orf174Q8IYL3 243 aa10.27□□□□□ -0.76
ERBB2-201ENST00000269571 DNASE2BQ8WZ79 361 aa10.27□□□□□ -0.76
ERBB2-201ENST00000269571 TRAV9-2A0A087WT02 112 aa10.27□□□□□ -0.77
ERBB2-201ENST00000269571 TRBV9A0A0B4J1U6 114 aa10.27□□□□□ -0.77
ERBB2-201ENST00000269571 RRHO14718 337 aa10.27□□□□□ -0.77
ERBB2-201ENST00000269571 RELBQ01201 579 aa10.27□□□□□ -0.77
ERBB2-201ENST00000269571 TTC32Q5I0X7 151 aa10.27□□□□□ -0.77
ERBB2-201ENST00000269571 TM2D1Q9BX74 207 aa10.27□□□□□ -0.77
ERBB2-201ENST00000269571 MGAMO43451 1857 aa10.27□□□□□ -0.77
ERBB2-201ENST00000269571 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.27□□□□□ -0.774e-7■■■□□ 17.7
ERBB2-201ENST00000269571 A0A1W2PQM1 296 aa10.27□□□□□ -0.77
ERBB2-201ENST00000269571 J3QR06 171 aa10.27□□□□□ -0.77
ERBB2-201ENST00000269571 CA1P00915 261 aaPredicted RBP10.27□□□□□ -0.77
ERBB2-201ENST00000269571 UCP1P25874 307 aa10.27□□□□□ -0.77
ERBB2-201ENST00000269571 OR2K2Q8NGT1 345 aa10.27□□□□□ -0.77
ERBB2-201ENST00000269571 LEAP2Q969E1 77 aa10.27□□□□□ -0.77
ERBB2-201ENST00000269571 NDFIP1Q9BT67 221 aa10.27□□□□□ -0.77
ERBB2-201ENST00000269571 LRRK1Q38SD2 2015 aa10.26□□□□□ -0.77
ERBB2-201ENST00000269571 CORTO00230 105 aa10.26□□□□□ -0.77
ERBB2-201ENST00000269571 NAPSAO96009 420 aa10.26□□□□□ -0.77
ERBB2-201ENST00000269571 OR2V2Q96R30 315 aa10.26□□□□□ -0.77
ERBB2-201ENST00000269571 SRXN1Q9BYN0 137 aa10.26□□□□□ -0.77
ERBB2-201ENST00000269571 ZNF581Q9P0T4 197 aa10.26□□□□□ -0.77
ERBB2-201ENST00000269571 OR51B2Q9Y5P1 312 aa10.26□□□□□ -0.77
ERBB2-201ENST00000269571 CHD3Q12873 2000 aaKnown RBP10.26□□□□□ -0.77
ERBB2-201ENST00000269571 C7orf71A4D174 169 aa10.26□□□□□ -0.77
ERBB2-201ENST00000269571 IGHMP01871 453 aa10.26□□□□□ -0.77
ERBB2-201ENST00000269571 RBFOX2O43251 390 aaKnown RBP eCLIP10.26□□□□□ -0.771e-6■■■■□ 19.5
ERBB2-201ENST00000269571 ARF6P62330 175 aa10.26□□□□□ -0.77
ERBB2-201ENST00000269571 ZNF324BQ6AW86 544 aaPredicted RBP10.26□□□□□ -0.77
ERBB2-201ENST00000269571 SAP25Q8TEE9 199 aa10.26□□□□□ -0.77
ERBB2-201ENST00000269571 TTTY12Q9BZ98 90 aa10.26□□□□□ -0.77
ERBB2-201ENST00000269571 IGHV1-69-2A0A0G2JMI3 117 aa10.26□□□□□ -0.77
ERBB2-201ENST00000269571 DNPH1O43598 174 aa10.26□□□□□ -0.77
ERBB2-201ENST00000269571 PAX2Q02962 417 aa10.26□□□□□ -0.77
ERBB2-201ENST00000269571 HGFACQ04756 655 aa10.26□□□□□ -0.77
ERBB2-201ENST00000269571 CSRP2Q16527 193 aa10.26□□□□□ -0.77
ERBB2-201ENST00000269571 LRRC75BQ2VPJ9 315 aa10.26□□□□□ -0.77
ERBB2-201ENST00000269571 LHFPL1Q86WI0 220 aa10.26□□□□□ -0.77
ERBB2-201ENST00000269571 ZNF525Q8N782 197 aa10.26□□□□□ -0.77
ERBB2-201ENST00000269571 SCO2A0A1W2PP80 73 aa10.25□□□□□ -0.77
ERBB2-201ENST00000269571 ODAMA1E959 279 aa10.25□□□□□ -0.77
ERBB2-201ENST00000269571 GZMHP20718 246 aa10.25□□□□□ -0.77
ERBB2-201ENST00000269571 OR4D5Q8NGN0 318 aa10.25□□□□□ -0.77
ERBB2-201ENST00000269571 OR10AG1Q8NH19 301 aa10.25□□□□□ -0.77
ERBB2-201ENST00000269571 PSMG3Q9BT73 122 aaPredicted RBP10.25□□□□□ -0.77
ERBB2-201ENST00000269571 CLEC5AQ9NY25 188 aa10.25□□□□□ -0.77
ERBB2-201ENST00000269571 IFI6P09912 130 aa10.25□□□□□ -0.77
ERBB2-201ENST00000269571 TSPOP30536 169 aa10.25□□□□□ -0.77
ERBB2-201ENST00000269571 LYZL4Q96KX0 146 aa10.25□□□□□ -0.77
ERBB2-201ENST00000269571 TXNDC17Q9BRA2 123 aa10.25□□□□□ -0.77
ERBB2-201ENST00000269571 HES7Q9BYE0 225 aa10.25□□□□□ -0.77
ERBB2-201ENST00000269571 PILRBQ9UKJ0 227 aa10.25□□□□□ -0.77
ERBB2-201ENST00000269571 THSD7BQ9C0I4 1608 aa10.25□□□□□ -0.77
ERBB2-201ENST00000269571 CLDN14O95500 239 aa10.25□□□□□ -0.77
ERBB2-201ENST00000269571 ESDP10768 282 aa10.25□□□□□ -0.77
ERBB2-201ENST00000269571 SSTR5P35346 364 aa10.25□□□□□ -0.77
ERBB2-201ENST00000269571 FHL1Q13642 323 aa10.25□□□□□ -0.77
ERBB2-201ENST00000269571 FLVCR1-AS1Q8TAF5 88 aa10.25□□□□□ -0.77
ERBB2-201ENST00000269571 KCNS1Q96KK3 526 aa10.25□□□□□ -0.77
ERBB2-201ENST00000269571 MYO7BQ6PIF6 2116 aa10.25□□□□□ -0.77
ERBB2-201ENST00000269571 PLAURQ03405 335 aa10.25□□□□□ -0.77
ERBB2-201ENST00000269571 C18orf12Q96KH6 178 aa10.25□□□□□ -0.77
ERBB2-201ENST00000269571 PLSCR2Q9NRY7 297 aa10.25□□□□□ -0.77
ERBB2-201ENST00000269571 RND2P52198 227 aa10.24□□□□□ -0.77
ERBB2-201ENST00000269571 TNXAQ16473 311 aa10.24□□□□□ -0.77
ERBB2-201ENST00000269571 KRTCAP3Q53RY4 240 aa10.24□□□□□ -0.77
ERBB2-201ENST00000269571 PRR31Q5SQ13 230 aa10.24□□□□□ -0.77
ERBB2-201ENST00000269571 TMEM171Q8WVE6 324 aa10.24□□□□□ -0.77
ERBB2-201ENST00000269571 PMCHL2Q9BQD1 86 aa10.24□□□□□ -0.77
ERBB2-201ENST00000269571 ELOVL5Q9NYP7 299 aa10.24□□□□□ -0.77
ERBB2-201ENST00000269571 ZFHX2Q9C0A1 2572 aaPredicted RBP10.24□□□□□ -0.77
ERBB2-201ENST00000269571 ZNF785A8K8V0 405 aa10.24□□□□□ -0.77
ERBB2-201ENST00000269571 CCL8P80075 99 aa10.24□□□□□ -0.77
ERBB2-201ENST00000269571 MPV17L2Q567V2 206 aa10.24□□□□□ -0.77
ERBB2-201ENST00000269571 CENPWQ5EE01 88 aa10.24□□□□□ -0.77
ERBB2-201ENST00000269571 C21orf140B9A014 251 aa10.24□□□□□ -0.77
ERBB2-201ENST00000269571 H3BVH4 76 aa10.24□□□□□ -0.77
ERBB2-201ENST00000269571 CCL25O15444 150 aa10.24□□□□□ -0.77
ERBB2-201ENST00000269571 GCSAMLQ5JQS6 135 aa10.24□□□□□ -0.77
ERBB2-201ENST00000269571 C10orf113Q5VZT2 155 aa10.24□□□□□ -0.77
ERBB2-201ENST00000269571 ZBTB34Q8NCN2 500 aa10.24□□□□□ -0.77
ERBB2-201ENST00000269571 OR1N2Q8NGR9 330 aa10.24□□□□□ -0.77
ERBB2-201ENST00000269571 NPCDR1Q9BY65 106 aa10.24□□□□□ -0.77
ERBB2-201ENST00000269571 S100A4P26447 101 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms