RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 SGPP2Q8IWX5 399 aa9.97□□□□□ -0.81
SS18-202ENST00000269138 FOXA2Q9Y261 457 aaPredicted RBP9.97□□□□□ -0.81
SS18-202ENST00000269138 CGB1A6NKQ9 187 aa9.97□□□□□ -0.81
SS18-202ENST00000269138 DBX1A6NMT0 343 aa9.97□□□□□ -0.81
SS18-202ENST00000269138 TEX22C9J3V5 150 aa9.97□□□□□ -0.81
SS18-202ENST00000269138 CREBL2O60519 120 aaPredicted RBP9.97□□□□□ -0.81
SS18-202ENST00000269138 IGLV1-40P01703 118 aa9.97□□□□□ -0.81
SS18-202ENST00000269138 MAS1LP35410 378 aa9.97□□□□□ -0.81
SS18-202ENST00000269138 RPL27AP46776 148 aaKnown RBP9.97□□□□□ -0.81
SS18-202ENST00000269138 OR2B8PP59922 312 aa9.97□□□□□ -0.81
SS18-202ENST00000269138 FOXE3Q13461 319 aa9.97□□□□□ -0.81
SS18-202ENST00000269138 TMEM187Q14656 261 aa9.97□□□□□ -0.81
SS18-202ENST00000269138 KHDC1LQ5JSQ8 128 aa9.97□□□□□ -0.81
SS18-202ENST00000269138 C18orf65Q6ZTR6 163 aa9.97□□□□□ -0.81
SS18-202ENST00000269138 SELENOHQ8IZQ5 122 aaKnown RBP9.97□□□□□ -0.81
SS18-202ENST00000269138 COMMD1Q8N668 190 aa9.97□□□□□ -0.81
SS18-202ENST00000269138 FYTTD1Q96QD9 318 aaKnown RBP9.97□□□□□ -0.81
SS18-202ENST00000269138 PHB2Q99623 299 aa9.97□□□□□ -0.81
SS18-202ENST00000269138 A0A0G2JRQ6 117 aa9.96□□□□□ -0.82
SS18-202ENST00000269138 B3GALNT1O75752 331 aa9.96□□□□□ -0.82
SS18-202ENST00000269138 CDS2O95674 445 aa9.96□□□□□ -0.82
SS18-202ENST00000269138 ELANEP08246 267 aa9.96□□□□□ -0.82
SS18-202ENST00000269138 P0C879 139 aa9.96□□□□□ -0.82
SS18-202ENST00000269138 PF4V1P10720 104 aa9.96□□□□□ -0.82
SS18-202ENST00000269138 PSMB8P28062 276 aa9.96□□□□□ -0.82
SS18-202ENST00000269138 DHODHQ02127 395 aa9.96□□□□□ -0.82
SS18-202ENST00000269138 KIAA0141Q14154 515 aaPredicted RBP9.96□□□□□ -0.82
SS18-202ENST00000269138 H2BFWTQ7Z2G1 175 aa9.96□□□□□ -0.82
SS18-202ENST00000269138 SLC25A42Q86VD7 318 aa9.96□□□□□ -0.82
SS18-202ENST00000269138 NDUFA11Q86Y39 141 aa9.96□□□□□ -0.82
SS18-202ENST00000269138 CADM3Q8N126 398 aa9.96□□□□□ -0.82
SS18-202ENST00000269138 CENPSQ8N2Z9 138 aa9.96□□□□□ -0.82
SS18-202ENST00000269138 RNF152Q8N8N0 203 aa9.96□□□□□ -0.82
SS18-202ENST00000269138 GALNT14Q96FL9 552 aa9.96□□□□□ -0.82
SS18-202ENST00000269138 KCNIP3Q9Y2W7 256 aa9.96□□□□□ -0.82
SS18-202ENST00000269138 TEX50A0A1B0GTY4 177 aa9.95□□□□□ -0.82
SS18-202ENST00000269138 SNAPC5O75971 98 aa9.95□□□□□ -0.82
SS18-202ENST00000269138 TSPAN15O95858 294 aa9.95□□□□□ -0.82
SS18-202ENST00000269138 SLC6A1P30531 599 aa9.95□□□□□ -0.82
SS18-202ENST00000269138 AKR1C2P52895 323 aa9.95□□□□□ -0.82
SS18-202ENST00000269138 RPL23AP62750 156 aaKnown RBP9.95□□□□□ -0.82
SS18-202ENST00000269138 ASAH1Q13510 395 aa9.95□□□□□ -0.82
SS18-202ENST00000269138 PPP1R1AQ13522 171 aa9.95□□□□□ -0.82
SS18-202ENST00000269138 TMEM128Q5BJH2 165 aa9.95□□□□□ -0.82
SS18-202ENST00000269138 CXorf66Q5JRM2 361 aaPredicted RBP9.95□□□□□ -0.82
SS18-202ENST00000269138 TMEM268Q5VZI3 342 aa9.95□□□□□ -0.82
SS18-202ENST00000269138 C19orf35Q6ZS72 473 aa9.95□□□□□ -0.82
SS18-202ENST00000269138 TMEM56Q96MV1 263 aa9.95□□□□□ -0.82
SS18-202ENST00000269138 MS4A10Q96PG2 267 aa9.95□□□□□ -0.82
SS18-202ENST00000269138 SPIN2AQ99865 258 aa9.95□□□□□ -0.82
SS18-202ENST00000269138 SPIN2BQ9BPZ2 258 aa9.95□□□□□ -0.82
SS18-202ENST00000269138 TSSC4Q9Y5U2 329 aaPredicted RBP9.95□□□□□ -0.82
SS18-202ENST00000269138 TMEM56-RWDD3S4R434 201 aa9.95□□□□□ -0.82
SS18-202ENST00000269138 A0A0B4J293 547 aa9.94□□□□□ -0.82
SS18-202ENST00000269138 AREGP15514 252 aa9.94□□□□□ -0.82
SS18-202ENST00000269138 ANXA7P20073 488 aaKnown RBP9.94□□□□□ -0.82
SS18-202ENST00000269138 VAMP1P23763 118 aa9.94□□□□□ -0.82
SS18-202ENST00000269138 RAB9AP51151 201 aa9.94□□□□□ -0.82
SS18-202ENST00000269138 ANKRD55Q3KP44 614 aa9.94□□□□□ -0.82
SS18-202ENST00000269138 TMEM65Q6PI78 240 aa9.94□□□□□ -0.82
SS18-202ENST00000269138 Q6ZRM9 215 aa9.94□□□□□ -0.82
SS18-202ENST00000269138 ZNF695Q8IW36 515 aa9.94□□□□□ -0.82
SS18-202ENST00000269138 OR10W1Q8NGF6 305 aa9.94□□□□□ -0.82
SS18-202ENST00000269138 OR5M8Q8NGP6 311 aa9.94□□□□□ -0.82
SS18-202ENST00000269138 RBPMSQ93062 196 aaKnown RBP9.94□□□□□ -0.82
SS18-202ENST00000269138 COMMD5Q9GZQ3 224 aa9.94□□□□□ -0.82
SS18-202ENST00000269138 OR51B2Q9Y5P1 312 aa9.94□□□□□ -0.82
SS18-202ENST00000269138 C15orf61A6NNL5 157 aa9.93□□□□□ -0.82
SS18-202ENST00000269138 SFT2D2O95562 160 aa9.93□□□□□ -0.82
SS18-202ENST00000269138 PRH1P02810 166 aa9.93□□□□□ -0.82
SS18-202ENST00000269138 TCRBP04435 133 aa9.93□□□□□ -0.82
SS18-202ENST00000269138 REG1AP05451 166 aa9.93□□□□□ -0.82
SS18-202ENST00000269138 DEFA5Q01523 94 aa9.93□□□□□ -0.82
SS18-202ENST00000269138 LYZL2Q7Z4W2 148 aa9.93□□□□□ -0.82
SS18-202ENST00000269138 OR1L8Q8NGR8 309 aa9.93□□□□□ -0.82
SS18-202ENST00000269138 OR4A16Q8NH70 328 aa9.93□□□□□ -0.82
SS18-202ENST00000269138 RNASE11Q8TAA1 199 aaKnown RBP9.93□□□□□ -0.82
SS18-202ENST00000269138 FAM110DQ8TAY7 271 aaPredicted RBP9.93□□□□□ -0.82
SS18-202ENST00000269138 MYOZ3Q8TDC0 251 aa9.93□□□□□ -0.82
SS18-202ENST00000269138 GPR146Q96CH1 333 aa9.93□□□□□ -0.82
SS18-202ENST00000269138 RRNAD1Q96FB5 475 aaKnown RBP9.93□□□□□ -0.82
SS18-202ENST00000269138 TMEM68Q96MH6 324 aa9.93□□□□□ -0.82
SS18-202ENST00000269138 TSC22D3Q99576 134 aa9.93□□□□□ -0.82
SS18-202ENST00000269138 HINT2Q9BX68 163 aa9.93□□□□□ -0.82
SS18-202ENST00000269138 QTRT1Q9BXR0 403 aaKnown RBP9.93□□□□□ -0.82
SS18-202ENST00000269138 ZNF355PQ9NSJ1 428 aa9.93□□□□□ -0.82
SS18-202ENST00000269138 ZFP57Q9NU63 452 aa9.93□□□□□ -0.82
SS18-202ENST00000269138 TMEM14BQ9NUH8 114 aa9.93□□□□□ -0.82
SS18-202ENST00000269138 COA4Q9NYJ1 87 aa9.93□□□□□ -0.82
SS18-202ENST00000269138 PRNDQ9UKY0 176 aa9.93□□□□□ -0.82
SS18-202ENST00000269138 TET2Q6N021 2002 aaPredicted RBP9.93□□□□□ -0.82
SS18-202ENST00000269138 TRAV6A0A075B6T7 132 aa9.92□□□□□ -0.82
SS18-202ENST00000269138 FAM240BA0A1B0GVZ2 78 aa9.92□□□□□ -0.82
SS18-202ENST00000269138 IGLC7A0M8Q6 106 aa9.92□□□□□ -0.82
SS18-202ENST00000269138 M0QZ24 198 aa9.92□□□□□ -0.82
SS18-202ENST00000269138 RBMXL2O75526 392 aaKnown RBP9.92□□□□□ -0.82
SS18-202ENST00000269138 ATG12O94817 140 aa9.92□□□□□ -0.82
SS18-202ENST00000269138 FGF2P09038 288 aa9.92□□□□□ -0.82
SS18-202ENST00000269138 TRAPPC2P0DI81 140 aa9.92□□□□□ -0.82
SS18-202ENST00000269138 TRAPPC2BP0DI82 140 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms