RNA–Protein interactions for RNA: ENST00000266735.9

SNRPF-201, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPF, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-201ENST00000266735 TEX38Q6PEX7 206 aa12.94□□□□□ -0.34
SNRPF-201ENST00000266735 UNQ5815/PRO19632Q6UWF5 114 aa12.94□□□□□ -0.34
SNRPF-201ENST00000266735 LGI3Q8N145 548 aa12.94□□□□□ -0.34
SNRPF-201ENST00000266735 MINDY2Q8NBR6 621 aa12.94□□□□□ -0.34
SNRPF-201ENST00000266735 LFNGQ8NES3 379 aa12.94□□□□□ -0.34
SNRPF-201ENST00000266735 LHFPL5Q8TAF8 219 aa12.94□□□□□ -0.34
SNRPF-201ENST00000266735 ENKURQ8TC29 256 aa12.94□□□□□ -0.34
SNRPF-201ENST00000266735 RRNAD1Q96FB5 475 aaKnown RBP12.94□□□□□ -0.34
SNRPF-201ENST00000266735 COMMD5Q9GZQ3 224 aa12.94□□□□□ -0.34
SNRPF-201ENST00000266735 PRNDQ9UKY0 176 aa12.94□□□□□ -0.34
SNRPF-201ENST00000266735 MSGN1A6NI15 193 aa12.93□□□□□ -0.34
SNRPF-201ENST00000266735 IGKV1-5P01602 117 aa12.93□□□□□ -0.34
SNRPF-201ENST00000266735 IGHG4P01861 327 aa12.93□□□□□ -0.34
SNRPF-201ENST00000266735 OR9G9P0C7N8 305 aa12.93□□□□□ -0.34
SNRPF-201ENST00000266735 RPL27AP46776 148 aaKnown RBP12.93□□□□□ -0.34
SNRPF-201ENST00000266735 SRSF4Q08170 494 aaKnown RBP12.93□□□□□ -0.34
SNRPF-201ENST00000266735 C10orf99Q6UWK7 81 aa12.93□□□□□ -0.34
SNRPF-201ENST00000266735 FAM219AQ8IW50 185 aa12.93□□□□□ -0.34
SNRPF-201ENST00000266735 SELENOHQ8IZQ5 122 aaKnown RBP12.93□□□□□ -0.34
SNRPF-201ENST00000266735 RNASE11Q8TAA1 199 aaKnown RBP12.93□□□□□ -0.34
SNRPF-201ENST00000266735 ALX4Q9H161 411 aaPredicted RBP12.93□□□□□ -0.34
SNRPF-201ENST00000266735 NUDT15Q9NV35 164 aa12.93□□□□□ -0.34
SNRPF-201ENST00000266735 FKBP11Q9NYL4 201 aa12.93□□□□□ -0.34
SNRPF-201ENST00000266735 FOXA2Q9Y261 457 aaPredicted RBP12.93□□□□□ -0.34
SNRPF-201ENST00000266735 A0A1W2PN81 502 aa12.92□□□□□ -0.34
SNRPF-201ENST00000266735 HLA-AP01891 365 aaKnown RBP12.92□□□□□ -0.34
SNRPF-201ENST00000266735 ELANEP08246 267 aa12.92□□□□□ -0.34
SNRPF-201ENST00000266735 OR4E1P0C645 316 aa12.92□□□□□ -0.34
SNRPF-201ENST00000266735 P0C879 139 aa12.92□□□□□ -0.34
SNRPF-201ENST00000266735 CD28P10747 220 aa12.92□□□□□ -0.34
SNRPF-201ENST00000266735 ANXA7P20073 488 aaKnown RBP12.92□□□□□ -0.34
SNRPF-201ENST00000266735 CHRNA7P36544 502 aa12.92□□□□□ -0.34
SNRPF-201ENST00000266735 FOXE3Q13461 319 aa12.92□□□□□ -0.34
SNRPF-201ENST00000266735 C11orf44Q8N8P7 122 aa12.92□□□□□ -0.34
SNRPF-201ENST00000266735 OR5M8Q8NGP6 311 aa12.92□□□□□ -0.34
SNRPF-201ENST00000266735 OR4A16Q8NH70 328 aa12.92□□□□□ -0.34
SNRPF-201ENST00000266735 PRR13Q9NZ81 148 aa12.92□□□□□ -0.34
SNRPF-201ENST00000266735 TRAV6A0A075B6T7 132 aa12.91□□□□□ -0.34
SNRPF-201ENST00000266735 A0A0B4J2A0 478 aa12.91□□□□□ -0.34
SNRPF-201ENST00000266735 C9orf170A2RU37 121 aa12.91□□□□□ -0.34
SNRPF-201ENST00000266735 C15orf61A6NNL5 157 aa12.91□□□□□ -0.34
SNRPF-201ENST00000266735 OPN1MWP04001 364 aa12.91□□□□□ -0.34
SNRPF-201ENST00000266735 OPN1MW2P0DN77 364 aa12.91□□□□□ -0.34
SNRPF-201ENST00000266735 OPN1MW3P0DN78 364 aa12.91□□□□□ -0.34
SNRPF-201ENST00000266735 MECP2P51608 486 aaKnown RBP12.91□□□□□ -0.34
SNRPF-201ENST00000266735 RAB25P57735 213 aa12.91□□□□□ -0.34
SNRPF-201ENST00000266735 CD83Q01151 205 aa12.91□□□□□ -0.34
SNRPF-201ENST00000266735 C4orf46Q504U0 113 aa12.91□□□□□ -0.34
SNRPF-201ENST00000266735 TCTEX1D4Q5JR98 221 aa12.91□□□□□ -0.34
SNRPF-201ENST00000266735 THOC7Q6I9Y2 204 aaKnown RBP12.91□□□□□ -0.34
SNRPF-201ENST00000266735 SLC35G3Q8N808 338 aa12.91□□□□□ -0.34
SNRPF-201ENST00000266735 LRTM2Q8N967 370 aa12.91□□□□□ -0.34
SNRPF-201ENST00000266735 DUSP18Q8NEJ0 188 aa12.91□□□□□ -0.34
SNRPF-201ENST00000266735 OR5B3Q8NH48 314 aa12.91□□□□□ -0.34
SNRPF-201ENST00000266735 CASTOR1Q8WTX7 329 aa12.91□□□□□ -0.34
SNRPF-201ENST00000266735 LSM10Q969L4 123 aaKnown RBP12.91□□□□□ -0.34
SNRPF-201ENST00000266735 FYTTD1Q96QD9 318 aaKnown RBP12.91□□□□□ -0.34
SNRPF-201ENST00000266735 PALMDQ9NP74 551 aa12.91□□□□□ -0.34
SNRPF-201ENST00000266735 TMEM14BQ9NUH8 114 aa12.91□□□□□ -0.34
SNRPF-201ENST00000266735 SHPKQ9UHJ6 478 aa12.91□□□□□ -0.34
SNRPF-201ENST00000266735 NSG2Q9Y328 171 aa12.91□□□□□ -0.34
SNRPF-201ENST00000266735 OR51B2Q9Y5P1 312 aa12.91□□□□□ -0.34
SNRPF-201ENST00000266735 DUXBA0A1W2PPF3 345 aa12.9□□□□□ -0.34
SNRPF-201ENST00000266735 RBMXL2O75526 392 aaKnown RBP12.9□□□□□ -0.34
SNRPF-201ENST00000266735 IGLV1-40P01703 118 aa12.9□□□□□ -0.34
SNRPF-201ENST00000266735 H2AFB2P0C5Z0 115 aa12.9□□□□□ -0.34
SNRPF-201ENST00000266735 MYOD1P15172 320 aa12.9□□□□□ -0.34
SNRPF-201ENST00000266735 PSMB8P28062 276 aa12.9□□□□□ -0.34
SNRPF-201ENST00000266735 OR2B8PP59922 312 aa12.9□□□□□ -0.34
SNRPF-201ENST00000266735 DHRS2Q13268 280 aa12.9□□□□□ -0.34
SNRPF-201ENST00000266735 CXorf66Q5JRM2 361 aaPredicted RBP12.9□□□□□ -0.34
SNRPF-201ENST00000266735 ASPHD1Q5U4P2 390 aa12.9□□□□□ -0.34
SNRPF-201ENST00000266735 NRARPQ7Z6K4 114 aa12.9□□□□□ -0.34
SNRPF-201ENST00000266735 LYG2Q86SG7 212 aa12.9□□□□□ -0.34
SNRPF-201ENST00000266735 ZNF429Q86V71 674 aa12.9□□□□□ -0.34
SNRPF-201ENST00000266735 RNF152Q8N8N0 203 aa12.9□□□□□ -0.34
SNRPF-201ENST00000266735 OR1L8Q8NGR8 309 aa12.9□□□□□ -0.34
SNRPF-201ENST00000266735 CITED2Q99967 270 aaPredicted RBP12.9□□□□□ -0.34
SNRPF-201ENST00000266735 SRSF8Q9BRL6 282 aaKnown RBP12.9□□□□□ -0.34
SNRPF-201ENST00000266735 QTRT1Q9BXR0 403 aaKnown RBP12.9□□□□□ -0.34
SNRPF-201ENST00000266735 ZNF257Q9Y2Q1 563 aa12.9□□□□□ -0.34
SNRPF-201ENST00000266735 COL6A5A8TX70 2615 aa12.89□□□□□ -0.35
SNRPF-201ENST00000266735 A0A0G2JRQ6 117 aa12.89□□□□□ -0.35
SNRPF-201ENST00000266735 TEX50A0A1B0GTY4 177 aa12.89□□□□□ -0.35
SNRPF-201ENST00000266735 TCRBV4S1A1TA0A5B7 111 aa12.89□□□□□ -0.35
SNRPF-201ENST00000266735 TEX22C9J3V5 150 aa12.89□□□□□ -0.35
SNRPF-201ENST00000266735 E7EUB6 86 aa12.89□□□□□ -0.35
SNRPF-201ENST00000266735 H3BUA1 57 aa12.89□□□□□ -0.35
SNRPF-201ENST00000266735 SOX15O60248 233 aa12.89□□□□□ -0.35
SNRPF-201ENST00000266735 ANKRD55Q3KP44 614 aa12.89□□□□□ -0.35
SNRPF-201ENST00000266735 TMEM65Q6PI78 240 aa12.89□□□□□ -0.35
SNRPF-201ENST00000266735 HSD17B13Q7Z5P4 300 aaPredicted RBP12.89□□□□□ -0.35
SNRPF-201ENST00000266735 NDUFA11Q86Y39 141 aa12.89□□□□□ -0.35
SNRPF-201ENST00000266735 COQ8AQ8NI60 647 aa12.89□□□□□ -0.35
SNRPF-201ENST00000266735 ZFP57Q9NU63 452 aa12.89□□□□□ -0.35
SNRPF-201ENST00000266735 TSSC4Q9Y5U2 329 aaPredicted RBP12.89□□□□□ -0.35
SNRPF-201ENST00000266735 A0A0B4J293 547 aa12.88□□□□□ -0.35
SNRPF-201ENST00000266735 A0A1B0GW64 132 aa12.88□□□□□ -0.35
SNRPF-201ENST00000266735 HMX3A6NHT5 357 aa12.88□□□□□ -0.35
SNRPF-201ENST00000266735 CGB1A6NKQ9 187 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms