RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 CDKN1AP38936 164 aa12.97□□□□□ -0.33
TIMP3-201ENST00000266085 FHITP49789 147 aa12.97□□□□□ -0.33
TIMP3-201ENST00000266085 PLPPR1Q8TBJ4 325 aa12.97□□□□□ -0.33
TIMP3-201ENST00000266085 GATAD1Q8WUU5 269 aa12.97□□□□□ -0.33
TIMP3-201ENST00000266085 PSMG3Q9BT73 122 aaPredicted RBP12.97□□□□□ -0.33
TIMP3-201ENST00000266085 M0R2Z0 102 aa12.97□□□□□ -0.33
TIMP3-201ENST00000266085 FCGR2BP31994 310 aaPredicted RBP12.97□□□□□ -0.33
TIMP3-201ENST00000266085 LRP11Q86VZ4 500 aa12.97□□□□□ -0.33
TIMP3-201ENST00000266085 C19orf24Q9BVV8 132 aa12.97□□□□□ -0.33
TIMP3-201ENST00000266085 GTF3C1Q12789 2109 aa12.97□□□□□ -0.33
TIMP3-201ENST00000266085 TRBV6-7A0A0A0MS04 114 aa12.97□□□□□ -0.33
TIMP3-201ENST00000266085 PRSS1P07477 247 aa12.97□□□□□ -0.33
TIMP3-201ENST00000266085 LCN2P80188 198 aa12.97□□□□□ -0.33
TIMP3-201ENST00000266085 HOXA4Q00056 320 aaPredicted RBP12.97□□□□□ -0.33
TIMP3-201ENST00000266085 C2orf68Q2NKX9 166 aa12.97□□□□□ -0.33
TIMP3-201ENST00000266085 TMEM78Q5T7P6 136 aa12.97□□□□□ -0.33
TIMP3-201ENST00000266085 NABP2Q9BQ15 211 aa12.97□□□□□ -0.33
TIMP3-201ENST00000266085 RPRMQ9NS64 109 aa12.97□□□□□ -0.33
TIMP3-201ENST00000266085 LINC00312Q9Y6C7 94 aa12.97□□□□□ -0.33
TIMP3-201ENST00000266085 DOCK10Q96BY6 2186 aa12.97□□□□□ -0.33
TIMP3-201ENST00000266085 NPIPB11E5RHQ5 1161 aa12.97□□□□□ -0.33
TIMP3-201ENST00000266085 WDR82Q6UXN9 313 aa12.97□□□□□ -0.33
TIMP3-201ENST00000266085 PLSCR4Q9NRQ2 329 aa12.97□□□□□ -0.33
TIMP3-201ENST00000266085 TCAPO15273 167 aa12.96□□□□□ -0.33
TIMP3-201ENST00000266085 FAM3BP58499 235 aaPredicted RBP12.96□□□□□ -0.33
TIMP3-201ENST00000266085 LHFPL5Q8TAF8 219 aa12.96□□□□□ -0.33
TIMP3-201ENST00000266085 VOPP1Q96AW1 172 aa12.96□□□□□ -0.33
TIMP3-201ENST00000266085 EAF1Q96JC9 268 aaPredicted RBP12.96□□□□□ -0.33
TIMP3-201ENST00000266085 IL18BPO95998 194 aa12.96□□□□□ -0.34
TIMP3-201ENST00000266085 ARL14EPLP0DKL9 152 aa12.96□□□□□ -0.34
TIMP3-201ENST00000266085 BTCP35070 178 aa12.95□□□□□ -0.34
TIMP3-201ENST00000266085 ELOBQ15370 118 aa12.95□□□□□ -0.34
TIMP3-201ENST00000266085 IBA57Q5T440 356 aaKnown RBP12.95□□□□□ -0.34
TIMP3-201ENST00000266085 GFI1Q99684 422 aa12.95□□□□□ -0.34
TIMP3-201ENST00000266085 MPTX1A8MV57 137 aa12.95□□□□□ -0.34
TIMP3-201ENST00000266085 SIGLEC5O15389 551 aa12.95□□□□□ -0.34
TIMP3-201ENST00000266085 CA2P00918 260 aa12.95□□□□□ -0.34
TIMP3-201ENST00000266085 CCL3L1P16619 93 aa12.95□□□□□ -0.34
TIMP3-201ENST00000266085 ZNF137PP52743 207 aa12.95□□□□□ -0.34
TIMP3-201ENST00000266085 C16orf92Q96LL3 132 aa12.95□□□□□ -0.34
TIMP3-201ENST00000266085 SSBP3Q9BWW4 388 aaPredicted RBP12.95□□□□□ -0.34
TIMP3-201ENST00000266085 LYNX1G3V0Z9 82 aa12.95□□□□□ -0.34
TIMP3-201ENST00000266085 LYNX1P0DP58 116 aa12.95□□□□□ -0.34
TIMP3-201ENST00000266085 RPL7P18124 248 aaKnown RBP12.95□□□□□ -0.34
TIMP3-201ENST00000266085 SPANXN1Q5VSR9 72 aa12.95□□□□□ -0.34
TIMP3-201ENST00000266085 Q6ZS92 163 aa12.95□□□□□ -0.34
TIMP3-201ENST00000266085 WDFY1Q8IWB7 410 aa12.95□□□□□ -0.34
TIMP3-201ENST00000266085 TANC1Q9C0D5 1861 aa12.95□□□□□ -0.34
TIMP3-201ENST00000266085 TFF1P04155 84 aa12.95□□□□□ -0.34
TIMP3-201ENST00000266085 MEOX2P50222 304 aa12.95□□□□□ -0.34
TIMP3-201ENST00000266085 B3GALT5-AS1P59052 145 aa12.95□□□□□ -0.34
TIMP3-201ENST00000266085 VAMP3Q15836 100 aa12.95□□□□□ -0.34
TIMP3-201ENST00000266085 PACRGQ96M98 296 aaPredicted RBP12.95□□□□□ -0.34
TIMP3-201ENST00000266085 TMEM191AQ9H0A3 160 aa12.95□□□□□ -0.34
TIMP3-201ENST00000266085 PTBP3O95758 552 aaKnown RBP12.94□□□□□ -0.34
TIMP3-201ENST00000266085 OR4A47Q6IF82 309 aa12.94□□□□□ -0.34
TIMP3-201ENST00000266085 TMEM116Q8NCL8 245 aa12.94□□□□□ -0.34
TIMP3-201ENST00000266085 TECTAO75443 2155 aa12.94□□□□□ -0.34
TIMP3-201ENST00000266085 APCSP02743 223 aa12.94□□□□□ -0.34
TIMP3-201ENST00000266085 OR51M1Q9H341 326 aa12.94□□□□□ -0.34
TIMP3-201ENST00000266085 TMEM56-RWDD3S4R434 201 aa12.94□□□□□ -0.34
TIMP3-201ENST00000266085 SPSB4Q96A44 273 aa12.94□□□□□ -0.34
TIMP3-201ENST00000266085 FBXL15Q9H469 300 aa12.94□□□□□ -0.34
TIMP3-201ENST00000266085 TRAV24A0A0B4J272 114 aa12.93□□□□□ -0.34
TIMP3-201ENST00000266085 TFPI2P48307 235 aa12.93□□□□□ -0.34
TIMP3-201ENST00000266085 FAM168AQ92567 244 aa12.93□□□□□ -0.34
TIMP3-201ENST00000266085 IGKV1D-13A0A0B4J2D9 117 aa12.93□□□□□ -0.34
TIMP3-201ENST00000266085 IGHV3-35A0A0C4DH35 117 aa12.93□□□□□ -0.34
TIMP3-201ENST00000266085 IGKV1-12A0A0C4DH73 117 aa12.93□□□□□ -0.34
TIMP3-201ENST00000266085 IGKV1D-12P01611 117 aa12.93□□□□□ -0.34
TIMP3-201ENST00000266085 IGKV1-13P0DP09 117 aa12.93□□□□□ -0.34
TIMP3-201ENST00000266085 PEAR1Q5VY43 1037 aaPredicted RBP12.93□□□□□ -0.34
TIMP3-201ENST00000266085 RARRES2Q99969 163 aa12.93□□□□□ -0.34
TIMP3-201ENST00000266085 HSPB7Q9UBY9 170 aa12.93□□□□□ -0.34
TIMP3-201ENST00000266085 MT-ND6P03923 174 aa12.93□□□□□ -0.34
TIMP3-201ENST00000266085 RPL29P47914 159 aaKnown RBP12.93□□□□□ -0.34
TIMP3-201ENST00000266085 RNFT1Q5M7Z0 435 aa12.93□□□□□ -0.34
TIMP3-201ENST00000266085 MDKP21741 143 aaPredicted RBP12.93□□□□□ -0.34
TIMP3-201ENST00000266085 RCC1LQ96I51 464 aaKnown RBP12.93□□□□□ -0.34
TIMP3-201ENST00000266085 TM4SF20Q53R12 229 aa12.92□□□□□ -0.34
TIMP3-201ENST00000266085 OR10J6PQ8NGY7 276 aa12.92□□□□□ -0.34
TIMP3-201ENST00000266085 PRO1933Q9H354 126 aa12.92□□□□□ -0.34
TIMP3-201ENST00000266085 YPEL1O60688 119 aa12.92□□□□□ -0.34
TIMP3-201ENST00000266085 CRYBB3P26998 211 aa12.92□□□□□ -0.34
TIMP3-201ENST00000266085 FAM106AQ4KMX7 169 aa12.92□□□□□ -0.34
TIMP3-201ENST00000266085 EBLN2Q6P2I7 272 aa12.92□□□□□ -0.34
TIMP3-201ENST00000266085 YPEL2Q96QA6 119 aa12.92□□□□□ -0.34
TIMP3-201ENST00000266085 C5orf63A6NC05 138 aa12.92□□□□□ -0.34
TIMP3-201ENST00000266085 ZNF273Q14593 569 aa12.92□□□□□ -0.34
TIMP3-201ENST00000266085 ZNF497Q6ZNH5 498 aa12.92□□□□□ -0.34
TIMP3-201ENST00000266085 MRPL32Q9BYC8 188 aaKnown RBP12.92□□□□□ -0.34
TIMP3-201ENST00000266085 IFT22Q9H7X7 185 aa12.92□□□□□ -0.34
TIMP3-201ENST00000266085 PLXNA4Q9HCM2 1894 aa12.92□□□□□ -0.34
TIMP3-201ENST00000266085 TRAV34A0A0B4J273 112 aa12.92□□□□□ -0.34
TIMP3-201ENST00000266085 RAB9AP51151 201 aa12.92□□□□□ -0.34
TIMP3-201ENST00000266085 SLC25A33Q9BSK2 321 aa12.92□□□□□ -0.34
TIMP3-201ENST00000266085 GGACTQ9BVM4 153 aa12.92□□□□□ -0.34
TIMP3-201ENST00000266085 TMEM189A5PLL7 270 aa12.91□□□□□ -0.34
TIMP3-201ENST00000266085 RNF222A6NCQ9 220 aa12.91□□□□□ -0.34
TIMP3-201ENST00000266085 IL4P05112 153 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms