RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 STPG3Q8N7X2 389 aa10.27□□□□□ -0.77
CHMP3-201ENST00000263856 UHRF2Q96PU4 802 aa10.27□□□□□ -0.77
CHMP3-201ENST00000263856 PROP1O75360 226 aa10.27□□□□□ -0.77
CHMP3-201ENST00000263856 IL6RP08887 468 aaPredicted RBP10.27□□□□□ -0.77
CHMP3-201ENST00000263856 IGFBP2P18065 325 aa10.27□□□□□ -0.77
CHMP3-201ENST00000263856 TPPP2P59282 170 aa10.27□□□□□ -0.77
CHMP3-201ENST00000263856 KRTCAP3Q53RY4 240 aa10.27□□□□□ -0.77
CHMP3-201ENST00000263856 C1orf210Q8IVY1 113 aa10.27□□□□□ -0.77
CHMP3-201ENST00000263856 RNASE7Q9H1E1 156 aaKnown RBP10.27□□□□□ -0.77
CHMP3-201ENST00000263856 PLEKHA3Q9HB20 300 aa10.27□□□□□ -0.77
CHMP3-201ENST00000263856 NAT8BQ9UHF3 227 aa10.27□□□□□ -0.77
CHMP3-201ENST00000263856 TCF19Q9Y242 345 aa10.27□□□□□ -0.77
CHMP3-201ENST00000263856 PKDREJQ9NTG1 2253 aa10.26□□□□□ -0.77
CHMP3-201ENST00000263856 A8MXE2 369 aa10.26□□□□□ -0.77
CHMP3-201ENST00000263856 TYMSP04818 313 aa10.26□□□□□ -0.77
CHMP3-201ENST00000263856 ACP1P24666 158 aa10.26□□□□□ -0.77
CHMP3-201ENST00000263856 CRYBB3P26998 211 aa10.26□□□□□ -0.77
CHMP3-201ENST00000263856 GCHFRP30047 84 aa10.26□□□□□ -0.77
CHMP3-201ENST00000263856 GABRA6Q16445 453 aa10.26□□□□□ -0.77
CHMP3-201ENST00000263856 DBX2Q6ZNG2 339 aa10.26□□□□□ -0.77
CHMP3-201ENST00000263856 MIR17HGQ75NE6 70 aa10.26□□□□□ -0.77
CHMP3-201ENST00000263856 LYG1Q8N1E2 194 aa10.26□□□□□ -0.77
CHMP3-201ENST00000263856 Q8N7P7 452 aa10.26□□□□□ -0.77
CHMP3-201ENST00000263856 ZCCHC14Q8WYQ9 949 aaKnown RBP10.26□□□□□ -0.77
CHMP3-201ENST00000263856 BTF3L4Q96K17 158 aa10.26□□□□□ -0.77
CHMP3-201ENST00000263856 SMG1Q96Q15 3661 aaKnown RBP10.26□□□□□ -0.77
CHMP3-201ENST00000263856 PCNX1Q96RV3 2341 aa10.26□□□□□ -0.77
CHMP3-201ENST00000263856 LAMA5O15230 3695 aa10.26□□□□□ -0.77
CHMP3-201ENST00000263856 TRAV34A0A0B4J273 112 aa10.26□□□□□ -0.77
CHMP3-201ENST00000263856 TMEM210A6NLX4 147 aa10.26□□□□□ -0.77
CHMP3-201ENST00000263856 K7EN84 100 aa10.26□□□□□ -0.77
CHMP3-201ENST00000263856 SPRY3O43610 288 aa10.26□□□□□ -0.77
CHMP3-201ENST00000263856 WNT2P09544 360 aa10.26□□□□□ -0.77
CHMP3-201ENST00000263856 NTF3P20783 257 aa10.26□□□□□ -0.77
CHMP3-201ENST00000263856 Q6ZWC4 215 aa10.26□□□□□ -0.77
CHMP3-201ENST00000263856 TECTAO75443 2155 aa10.26□□□□□ -0.77
CHMP3-201ENST00000263856 CECR9P0C854 216 aa10.26□□□□□ -0.77
CHMP3-201ENST00000263856 ZNF134P52741 427 aa10.26□□□□□ -0.77
CHMP3-201ENST00000263856 LBHQ53QV2 105 aaPredicted RBP10.26□□□□□ -0.77
CHMP3-201ENST00000263856 PQLC2Q6ZP29 291 aa10.26□□□□□ -0.77
CHMP3-201ENST00000263856 VAMP8Q9BV40 100 aa10.26□□□□□ -0.77
CHMP3-201ENST00000263856 STAG3L2P0CL84 134 aa10.25□□□□□ -0.77
CHMP3-201ENST00000263856 STAG3L3P0CL85 134 aa10.25□□□□□ -0.77
CHMP3-201ENST00000263856 NPY1RP25929 384 aa10.25□□□□□ -0.77
CHMP3-201ENST00000263856 TFPI2P48307 235 aa10.25□□□□□ -0.77
CHMP3-201ENST00000263856 EFNB3Q15768 340 aa10.25□□□□□ -0.77
CHMP3-201ENST00000263856 ZNF718Q3SXZ3 478 aa10.25□□□□□ -0.77
CHMP3-201ENST00000263856 BEND2Q8NDZ0 799 aa10.25□□□□□ -0.77
CHMP3-201ENST00000263856 ZPBPQ9BS86 351 aa10.25□□□□□ -0.77
CHMP3-201ENST00000263856 TMEM106BQ9NUM4 274 aa10.25□□□□□ -0.77
CHMP3-201ENST00000263856 ZNRD1Q9P1U0 126 aa10.25□□□□□ -0.77
CHMP3-201ENST00000263856 GFRA3O60609 400 aa10.25□□□□□ -0.77
CHMP3-201ENST00000263856 IGHV3-48P01763 117 aa10.25□□□□□ -0.77
CHMP3-201ENST00000263856 OPRK1P41145 380 aa10.25□□□□□ -0.77
CHMP3-201ENST00000263856 EIF4EBP1Q13541 118 aaPredicted RBP10.25□□□□□ -0.77
CHMP3-201ENST00000263856 MORN2Q502X0 79 aa10.25□□□□□ -0.77
CHMP3-201ENST00000263856 C1orf194Q5T5A4 169 aa10.25□□□□□ -0.77
CHMP3-201ENST00000263856 TEPPQ6URK8 271 aa10.25□□□□□ -0.77
CHMP3-201ENST00000263856 TMEM144Q7Z5S9 345 aa10.25□□□□□ -0.77
CHMP3-201ENST00000263856 MOGAT3Q86VF5 341 aa10.25□□□□□ -0.77
CHMP3-201ENST00000263856 OR5AU1Q8NGC0 362 aa10.25□□□□□ -0.77
CHMP3-201ENST00000263856 GMPPAQ96IJ6 420 aaPredicted RBP10.25□□□□□ -0.77
CHMP3-201ENST00000263856 FER1L6-AS2Q96M78 137 aa10.25□□□□□ -0.77
CHMP3-201ENST00000263856 NPVFQ9HCQ7 196 aa10.25□□□□□ -0.77
CHMP3-201ENST00000263856 PLXNB1O43157 2135 aa10.25□□□□□ -0.77
CHMP3-201ENST00000263856 LNP1A1A4G5 178 aa10.24□□□□□ -0.77
CHMP3-201ENST00000263856 CA1P00915 261 aaPredicted RBP10.24□□□□□ -0.77
CHMP3-201ENST00000263856 CA2P00918 260 aa10.24□□□□□ -0.77
CHMP3-201ENST00000263856 IRF2P14316 349 aa10.24□□□□□ -0.77
CHMP3-201ENST00000263856 RHOBP62745 196 aa10.24□□□□□ -0.77
CHMP3-201ENST00000263856 SRSF6Q13247 344 aaKnown RBP10.24□□□□□ -0.77
CHMP3-201ENST00000263856 RPEL1Q2QD12 228 aa10.24□□□□□ -0.77
CHMP3-201ENST00000263856 SPRNQ5BIV9 151 aa10.24□□□□□ -0.77
CHMP3-201ENST00000263856 ARSJQ5FYB0 599 aaPredicted RBP10.24□□□□□ -0.77
CHMP3-201ENST00000263856 MMD2Q8IY49 270 aa10.24□□□□□ -0.77
CHMP3-201ENST00000263856 CDX2Q99626 313 aaPredicted RBP10.24□□□□□ -0.77
CHMP3-201ENST00000263856 TMPRSS2O15393 492 aa10.24□□□□□ -0.77
CHMP3-201ENST00000263856 AMTP48728 403 aa10.24□□□□□ -0.77
CHMP3-201ENST00000263856 GNG4P50150 75 aa10.24□□□□□ -0.77
CHMP3-201ENST00000263856 ZNF83P51522 516 aa10.24□□□□□ -0.77
CHMP3-201ENST00000263856 MLANAQ16655 118 aa10.24□□□□□ -0.77
CHMP3-201ENST00000263856 VWC2Q2TAL6 325 aa10.24□□□□□ -0.77
CHMP3-201ENST00000263856 CENPWQ5EE01 88 aa10.24□□□□□ -0.77
CHMP3-201ENST00000263856 FAM214BQ7L5A3 538 aa10.24□□□□□ -0.77
CHMP3-201ENST00000263856 UBALD2Q8IYN6 164 aa10.24□□□□□ -0.77
CHMP3-201ENST00000263856 ATOH7Q8N100 152 aa10.24□□□□□ -0.77
CHMP3-201ENST00000263856 SIGLECL1Q8N7X8 197 aa10.24□□□□□ -0.77
CHMP3-201ENST00000263856 SLC24A4Q8NFF2 622 aa10.24□□□□□ -0.77
CHMP3-201ENST00000263856 RND1Q92730 232 aa10.24□□□□□ -0.77
CHMP3-201ENST00000263856 OPN3Q9H1Y3 402 aaPredicted RBP10.24□□□□□ -0.77
CHMP3-201ENST00000263856 PPIAL4AQ9Y536 164 aa10.24□□□□□ -0.77
CHMP3-201ENST00000263856 FOXL1Q12952 345 aa10.24□□□□□ -0.77
CHMP3-201ENST00000263856 RAB31Q13636 194 aa10.24□□□□□ -0.77
CHMP3-201ENST00000263856 DUX4L9Q6RFH8 374 aaPredicted RBP10.24□□□□□ -0.77
CHMP3-201ENST00000263856 AHRRA9YTQ3 701 aa10.23□□□□□ -0.77
CHMP3-201ENST00000263856 ADH4P08319 380 aa10.23□□□□□ -0.77
CHMP3-201ENST00000263856 TDGF1P3P51864 188 aa10.23□□□□□ -0.77
CHMP3-201ENST00000263856 MDS2Q8NDY4 140 aa10.23□□□□□ -0.77
CHMP3-201ENST00000263856 SSBP3Q9BWW4 388 aaPredicted RBP10.23□□□□□ -0.77
CHMP3-201ENST00000263856 HES4Q9HCC6 221 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms