RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 C15orf65H3BRN8 121 aa7.54□□□□□ -1.2
MSH4-201ENST00000263187 WT1P19544 449 aaPredicted RBP7.54□□□□□ -1.2
MSH4-201ENST00000263187 ADMP35318 185 aa7.54□□□□□ -1.2
MSH4-201ENST00000263187 ERVK-16P61578 105 aa7.54□□□□□ -1.2
MSH4-201ENST00000263187 ZNF90Q03938 601 aa7.54□□□□□ -1.2
MSH4-201ENST00000263187 FXYD3Q14802 87 aa7.54□□□□□ -1.2
MSH4-201ENST00000263187 ZNF718Q3SXZ3 478 aa7.54□□□□□ -1.2
MSH4-201ENST00000263187 MORN2Q502X0 79 aa7.54□□□□□ -1.2
MSH4-201ENST00000263187 SFRP2Q96HF1 295 aa7.54□□□□□ -1.2
MSH4-201ENST00000263187 OR2V2Q96R30 315 aa7.54□□□□□ -1.2
MSH4-201ENST00000263187 HSD17B10Q99714 261 aaKnown RBP7.54□□□□□ -1.2
MSH4-201ENST00000263187 ZDHHC11Q9H8X9 412 aa7.54□□□□□ -1.2
MSH4-201ENST00000263187 HES4Q9HCC6 221 aa7.54□□□□□ -1.2
MSH4-201ENST00000263187 WDR83OSQ9Y284 106 aa7.54□□□□□ -1.2
MSH4-201ENST00000263187 IGHV1-18A0A0C4DH31 117 aa7.54□□□□□ -1.2
MSH4-201ENST00000263187 A8MWP6 167 aa7.54□□□□□ -1.2
MSH4-201ENST00000263187 CGAP01215 116 aa7.54□□□□□ -1.2
MSH4-201ENST00000263187 RPL31P62899 125 aaKnown RBP7.54□□□□□ -1.2
MSH4-201ENST00000263187 BATFQ16520 125 aa7.54□□□□□ -1.2
MSH4-201ENST00000263187 TMEM18Q96B42 140 aa7.54□□□□□ -1.2
MSH4-201ENST00000263187 PYGO2Q9BRQ0 406 aa7.54□□□□□ -1.2
MSH4-201ENST00000263187 ZZEF1O43149 2961 aa7.54□□□□□ -1.2
MSH4-201ENST00000263187 IGHV2OR16-5A0A0B4J2B6 119 aa7.54□□□□□ -1.2
MSH4-201ENST00000263187 TMEM210A6NLX4 147 aa7.54□□□□□ -1.2
MSH4-201ENST00000263187 IGFBP2P18065 325 aa7.54□□□□□ -1.2
MSH4-201ENST00000263187 TIMP3P35625 211 aa7.54□□□□□ -1.2
MSH4-201ENST00000263187 NBL1P41271 181 aa7.54□□□□□ -1.2
MSH4-201ENST00000263187 INO80CQ6PI98 192 aaPredicted RBP7.54□□□□□ -1.2
MSH4-201ENST00000263187 CENPVQ7Z7K6 275 aaPredicted RBP7.54□□□□□ -1.2
MSH4-201ENST00000263187 ANAPC16Q96DE5 110 aa7.54□□□□□ -1.2
MSH4-201ENST00000263187 GGTLC1Q9BX51 225 aa7.54□□□□□ -1.2
MSH4-201ENST00000263187 OTOGLQ3ZCN5 2332 aa7.53□□□□□ -1.2
MSH4-201ENST00000263187 GFRA3O60609 400 aa7.53□□□□□ -1.2
MSH4-201ENST00000263187 IER3P46695 156 aa7.53□□□□□ -1.2
MSH4-201ENST00000263187 RPL29P47914 159 aaKnown RBP7.53□□□□□ -1.2
MSH4-201ENST00000263187 REG1BP48304 166 aa7.53□□□□□ -1.2
MSH4-201ENST00000263187 RAB4BP61018 213 aa7.53□□□□□ -1.2
MSH4-201ENST00000263187 PRB3Q04118 309 aaPredicted RBP7.53□□□□□ -1.2
MSH4-201ENST00000263187 ARSJQ5FYB0 599 aaPredicted RBP7.53□□□□□ -1.2
MSH4-201ENST00000263187 MIR17HGQ75NE6 70 aa7.53□□□□□ -1.2
MSH4-201ENST00000263187 DOLPP1Q86YN1 238 aa7.53□□□□□ -1.2
MSH4-201ENST00000263187 ZBTB34Q8NCN2 500 aa7.53□□□□□ -1.2
MSH4-201ENST00000263187 MS4A10Q96PG2 267 aa7.53□□□□□ -1.2
MSH4-201ENST00000263187 FKBP11Q9NYL4 201 aa7.53□□□□□ -1.2
MSH4-201ENST00000263187 TCF19Q9Y242 345 aa7.53□□□□□ -1.2
MSH4-201ENST00000263187 SPAARA0A1B0GVQ0 90 aa7.53□□□□□ -1.2
MSH4-201ENST00000263187 GGCTO75223 188 aaKnown RBP7.53□□□□□ -1.2
MSH4-201ENST00000263187 MMP23AO75900 390 aa7.53□□□□□ -1.2
MSH4-201ENST00000263187 IL6RP08887 468 aaPredicted RBP7.53□□□□□ -1.2
MSH4-201ENST00000263187 PLA2G2CQ5R387 149 aa7.53□□□□□ -1.2
MSH4-201ENST00000263187 GCSAMQ8N6F7 178 aa7.53□□□□□ -1.2
MSH4-201ENST00000263187 STPG3Q8N7X2 389 aa7.53□□□□□ -1.2
MSH4-201ENST00000263187 LOXL4Q96JB6 756 aa7.53□□□□□ -1.2
MSH4-201ENST00000263187 K7EN84 100 aa7.53□□□□□ -1.2
MSH4-201ENST00000263187 TGOLN2O43493 480 aa7.53□□□□□ -1.2
MSH4-201ENST00000263187 CA2P00918 260 aa7.53□□□□□ -1.2
MSH4-201ENST00000263187 RELBQ01201 579 aa7.53□□□□□ -1.2
MSH4-201ENST00000263187 DEFB109BQ30KR1 87 aa7.53□□□□□ -1.2
MSH4-201ENST00000263187 ZNF705AQ6ZN79 300 aaPredicted RBP7.53□□□□□ -1.2
MSH4-201ENST00000263187 ITLN1Q8WWA0 313 aa7.53□□□□□ -1.2
MSH4-201ENST00000263187 C1orf159Q96HA4 380 aa7.53□□□□□ -1.2
MSH4-201ENST00000263187 RNASE7Q9H1E1 156 aaKnown RBP7.53□□□□□ -1.2
MSH4-201ENST00000263187 CLCF1Q9UBD9 225 aa7.53□□□□□ -1.2
MSH4-201ENST00000263187 DSCAMO60469 2012 aa7.53□□□□□ -1.2
MSH4-201ENST00000263187 TANC2Q9HCD6 1990 aa7.52□□□□□ -1.2
MSH4-201ENST00000263187 HPRT1P00492 218 aa7.52□□□□□ -1.21
MSH4-201ENST00000263187 CA1P00915 261 aaPredicted RBP7.52□□□□□ -1.21
MSH4-201ENST00000263187 IGKV3-15P01624 115 aa7.52□□□□□ -1.21
MSH4-201ENST00000263187 APELAP0DMC3 54 aa7.52□□□□□ -1.21
MSH4-201ENST00000263187 ERVFC1-1P60608 527 aa7.52□□□□□ -1.21
MSH4-201ENST00000263187 SPCS3P61009 180 aa7.52□□□□□ -1.21
MSH4-201ENST00000263187 PSG5Q15238 335 aa7.52□□□□□ -1.21
MSH4-201ENST00000263187 TOMM20LQ6UXN7 152 aa7.52□□□□□ -1.21
MSH4-201ENST00000263187 DBX2Q6ZNG2 339 aa7.52□□□□□ -1.21
MSH4-201ENST00000263187 CISD2Q8N5K1 135 aaKnown RBP7.52□□□□□ -1.21
MSH4-201ENST00000263187 OR10G8Q8NGN5 311 aa7.52□□□□□ -1.21
MSH4-201ENST00000263187 OR5R1Q8NH85 324 aa7.52□□□□□ -1.21
MSH4-201ENST00000263187 SGK494Q96LW2 274 aa7.52□□□□□ -1.21
MSH4-201ENST00000263187 TBX15Q96SF7 602 aa7.52□□□□□ -1.21
MSH4-201ENST00000263187 CCL13Q99616 98 aa7.52□□□□□ -1.21
MSH4-201ENST00000263187 PARD6GQ9BYG4 376 aaPredicted RBP7.52□□□□□ -1.21
MSH4-201ENST00000263187 MRPL37Q9BZE1 423 aaKnown RBP7.52□□□□□ -1.21
MSH4-201ENST00000263187 SAA2-SAA4A0A096LPE2 208 aa7.52□□□□□ -1.21
MSH4-201ENST00000263187 PDE6DO43924 150 aa7.52□□□□□ -1.21
MSH4-201ENST00000263187 OR7C2O60412 319 aa7.52□□□□□ -1.21
MSH4-201ENST00000263187 IGKV1-16P04430 117 aa7.52□□□□□ -1.21
MSH4-201ENST00000263187 SAA2P0DJI9 122 aaPredicted RBP7.52□□□□□ -1.21
MSH4-201ENST00000263187 CRYBB3P26998 211 aa7.52□□□□□ -1.21
MSH4-201ENST00000263187 EFNB3Q15768 340 aa7.52□□□□□ -1.21
MSH4-201ENST00000263187 CT45A1Q5HYN5 189 aa7.52□□□□□ -1.21
MSH4-201ENST00000263187 OR4A47Q6IF82 309 aa7.52□□□□□ -1.21
MSH4-201ENST00000263187 OR8I2Q8N0Y5 310 aa7.52□□□□□ -1.21
MSH4-201ENST00000263187 GBGT1Q8N5D6 347 aa7.52□□□□□ -1.21
MSH4-201ENST00000263187 OR10W1Q8NGF6 305 aa7.52□□□□□ -1.21
MSH4-201ENST00000263187 CT45A3Q8NHU0 189 aa7.52□□□□□ -1.21
MSH4-201ENST00000263187 LURAP1Q96LR2 239 aa7.52□□□□□ -1.21
MSH4-201ENST00000263187 IFI27L2Q9H2X8 130 aa7.52□□□□□ -1.21
MSH4-201ENST00000263187 SERTAD4Q9NUC0 356 aa7.52□□□□□ -1.21
MSH4-201ENST00000263187 ELOVL5Q9NYP7 299 aa7.52□□□□□ -1.21
MSH4-201ENST00000263187 PAM16Q9Y3D7 125 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms