RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 ELOVL5Q9NYP7 299 aa10.98□□□□□ -0.65
TTC39A-202ENST00000262676 SIRT4Q9Y6E7 314 aaPredicted RBP10.98□□□□□ -0.65
TTC39A-202ENST00000262676 COL11A1P12107 1806 aaPredicted RBP10.98□□□□□ -0.65
TTC39A-202ENST00000262676 FGF5P12034 268 aa10.98□□□□□ -0.65
TTC39A-202ENST00000262676 SNRPD3P62318 126 aaKnown RBP10.98□□□□□ -0.65
TTC39A-202ENST00000262676 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.98□□□□□ -0.65
TTC39A-202ENST00000262676 FBXW9Q5XUX1 488 aa10.98□□□□□ -0.65
TTC39A-202ENST00000262676 GCSAMQ8N6F7 178 aa10.98□□□□□ -0.65
TTC39A-202ENST00000262676 WDR34Q96EX3 536 aa10.98□□□□□ -0.65
TTC39A-202ENST00000262676 FGF12P61328 243 aa10.98□□□□□ -0.65
TTC39A-202ENST00000262676 TMEM249Q2WGJ8 235 aa10.98□□□□□ -0.65
TTC39A-202ENST00000262676 SIGMAR1Q99720 223 aa10.98□□□□□ -0.65
TTC39A-202ENST00000262676 IDI2-AS1Q9NZ38 188 aa10.98□□□□□ -0.65
TTC39A-202ENST00000262676 HS3ST3B1Q9Y662 390 aa10.98□□□□□ -0.65
TTC39A-202ENST00000262676 SIPA1L3O60292 1781 aaPredicted RBP10.98□□□□□ -0.65
TTC39A-202ENST00000262676 LOC390937A0A1W2PQ73 354 aa10.98□□□□□ -0.65
TTC39A-202ENST00000262676 PEX7O00628 323 aa10.98□□□□□ -0.65
TTC39A-202ENST00000262676 C1orf162Q8NEQ5 155 aaPredicted RBP10.98□□□□□ -0.65
TTC39A-202ENST00000262676 DTX4Q9Y2E6 619 aa10.98□□□□□ -0.65
TTC39A-202ENST00000262676 S4R3C0 116 aa10.98□□□□□ -0.65
TTC39A-202ENST00000262676 PRR32B1ATL7 298 aa10.97□□□□□ -0.65
TTC39A-202ENST00000262676 MALP21145 153 aa10.97□□□□□ -0.65
TTC39A-202ENST00000262676 GPR183P32249 361 aa10.97□□□□□ -0.65
TTC39A-202ENST00000262676 TNFRSF9Q07011 255 aa10.97□□□□□ -0.65
TTC39A-202ENST00000262676 VAX1Q5SQQ9 334 aa10.97□□□□□ -0.65
TTC39A-202ENST00000262676 GFI1BQ5VTD9 330 aa10.97□□□□□ -0.65
TTC39A-202ENST00000262676 ITLN1Q8WWA0 313 aa10.97□□□□□ -0.65
TTC39A-202ENST00000262676 ARAP2Q8WZ64 1704 aa10.97□□□□□ -0.65
TTC39A-202ENST00000262676 TRAV30A0A087WSZ9 112 aa10.97□□□□□ -0.65
TTC39A-202ENST00000262676 MGST3O14880 152 aa10.97□□□□□ -0.65
TTC39A-202ENST00000262676 NPPCP23582 126 aa10.97□□□□□ -0.65
TTC39A-202ENST00000262676 GCHFRP30047 84 aa10.97□□□□□ -0.65
TTC39A-202ENST00000262676 NHP2Q9NX24 153 aaKnown RBP10.97□□□□□ -0.65
TTC39A-202ENST00000262676 PGPEP1LA6NFU8 196 aa10.97□□□□□ -0.65
TTC39A-202ENST00000262676 NUTF2P61970 127 aaKnown RBP10.97□□□□□ -0.65
TTC39A-202ENST00000262676 IRF3Q14653 427 aa10.97□□□□□ -0.65
TTC39A-202ENST00000262676 ICAM4Q14773 271 aa10.97□□□□□ -0.65
TTC39A-202ENST00000262676 JMJD8Q96S16 334 aa10.97□□□□□ -0.65
TTC39A-202ENST00000262676 NABP2Q9BQ15 211 aa10.97□□□□□ -0.65
TTC39A-202ENST00000262676 NXT2Q9NPJ8 142 aaKnown RBP10.97□□□□□ -0.65
TTC39A-202ENST00000262676 A0A1W2PRX2 142 aa10.97□□□□□ -0.65
TTC39A-202ENST00000262676 UPK3AO75631 287 aa10.97□□□□□ -0.65
TTC39A-202ENST00000262676 MARS2Q96GW9 593 aaKnown RBP10.97□□□□□ -0.65
TTC39A-202ENST00000262676 UCP2P55851 309 aa10.97□□□□□ -0.65
TTC39A-202ENST00000262676 SEC16AO15027 2179 aa10.97□□□□□ -0.65
TTC39A-202ENST00000262676 C7orf66A4D0T2 115 aa10.96□□□□□ -0.65
TTC39A-202ENST00000262676 MPV17P39210 176 aa10.96□□□□□ -0.65
TTC39A-202ENST00000262676 PSG4Q00888 419 aa10.96□□□□□ -0.65
TTC39A-202ENST00000262676 SLC25A15Q9Y619 301 aa10.96□□□□□ -0.65
TTC39A-202ENST00000262676 A0A1W2PPV9 198 aa10.96□□□□□ -0.65
TTC39A-202ENST00000262676 RNASE4P34096 147 aaKnown RBP10.96□□□□□ -0.65
TTC39A-202ENST00000262676 LEPP41159 167 aa10.96□□□□□ -0.65
TTC39A-202ENST00000262676 ASIPP42127 132 aa10.96□□□□□ -0.65
TTC39A-202ENST00000262676 FUT5Q11128 374 aa10.96□□□□□ -0.65
TTC39A-202ENST00000262676 HMGCLL1Q8TB92 370 aa10.96□□□□□ -0.65
TTC39A-202ENST00000262676 DUX3Q96PT4 197 aa10.96□□□□□ -0.65
TTC39A-202ENST00000262676 ALX4Q9H161 411 aaPredicted RBP10.96□□□□□ -0.65
TTC39A-202ENST00000262676 HIST1H4AP62805 103 aaKnown RBP10.96□□□□□ -0.65
TTC39A-202ENST00000262676 TMEM155Q4W5P6 130 aa10.96□□□□□ -0.65
TTC39A-202ENST00000262676 EEF1AKMT3Q96AZ1 226 aa10.96□□□□□ -0.65
TTC39A-202ENST00000262676 RGPD3A6NKT7 1758 aaPredicted RBP10.96□□□□□ -0.66
TTC39A-202ENST00000262676 IFITM3Q01628 133 aa10.96□□□□□ -0.66
TTC39A-202ENST00000262676 FAM214BQ7L5A3 538 aa10.96□□□□□ -0.66
TTC39A-202ENST00000262676 TET1Q8NFU7 2136 aa10.96□□□□□ -0.66
TTC39A-202ENST00000262676 ATP5LO75964 103 aa10.96□□□□□ -0.66
TTC39A-202ENST00000262676 NPIPB3Q92617 1050 aa10.96□□□□□ -0.66
TTC39A-202ENST00000262676 RNF115Q9Y4L5 304 aa10.96□□□□□ -0.66
TTC39A-202ENST00000262676 TRAV2A0A0B4J234 112 aa10.95□□□□□ -0.66
TTC39A-202ENST00000262676 SRSF6Q13247 344 aaKnown RBP10.95□□□□□ -0.66
TTC39A-202ENST00000262676 FAM181AQ8N9Y4 354 aa10.95□□□□□ -0.66
TTC39A-202ENST00000262676 ZNF721Q8TF20 911 aa10.95□□□□□ -0.66
TTC39A-202ENST00000262676 GPR132Q9UNW8 380 aa10.95□□□□□ -0.66
TTC39A-202ENST00000262676 AHRRA9YTQ3 701 aa10.95□□□□□ -0.66
TTC39A-202ENST00000262676 CD69Q07108 199 aa10.95□□□□□ -0.66
TTC39A-202ENST00000262676 DEFB121Q5J5C9 76 aa10.95□□□□□ -0.66
TTC39A-202ENST00000262676 KIR3DL3Q8N743 410 aa10.95□□□□□ -0.66
TTC39A-202ENST00000262676 ITLN2Q8WWU7 325 aaPredicted RBP10.95□□□□□ -0.66
TTC39A-202ENST00000262676 DANCRP0C864 163 aa10.95□□□□□ -0.66
TTC39A-202ENST00000262676 C5orf30Q96GV9 206 aa10.95□□□□□ -0.66
TTC39A-202ENST00000262676 WDYHV1Q96HA8 205 aa10.95□□□□□ -0.66
TTC39A-202ENST00000262676 ZNF48Q96MX3 618 aaPredicted RBP10.95□□□□□ -0.66
TTC39A-202ENST00000262676 NPIPB4C9JG80 1138 aa10.95□□□□□ -0.66
TTC39A-202ENST00000262676 PRSS23O95084 383 aa10.95□□□□□ -0.66
TTC39A-202ENST00000262676 FBLN7Q53RD9 439 aa10.95□□□□□ -0.66
TTC39A-202ENST00000262676 PCSK4Q6UW60 755 aa10.95□□□□□ -0.66
TTC39A-202ENST00000262676 ZNF562Q6V9R5 426 aa10.95□□□□□ -0.66
TTC39A-202ENST00000262676 IL36BQ9NZH7 164 aa10.95□□□□□ -0.66
TTC39A-202ENST00000262676 TCF20Q9UGU0 1960 aaKnown RBP10.95□□□□□ -0.66
TTC39A-202ENST00000262676 HSPE1P61604 102 aaKnown RBP10.94□□□□□ -0.66
TTC39A-202ENST00000262676 MYOFQ9NZM1 2061 aa10.94□□□□□ -0.66
TTC39A-202ENST00000262676 MARCH11A6NNE9 402 aa10.94□□□□□ -0.66
TTC39A-202ENST00000262676 CFHR1Q03591 330 aa10.94□□□□□ -0.66
TTC39A-202ENST00000262676 FAM89BQ8N5H3 189 aa10.94□□□□□ -0.66
TTC39A-202ENST00000262676 OR4X2Q8NGF9 303 aa10.94□□□□□ -0.66
TTC39A-202ENST00000262676 SSC4DQ8WTU2 575 aa10.94□□□□□ -0.66
TTC39A-202ENST00000262676 MRPL32Q9BYC8 188 aaKnown RBP10.94□□□□□ -0.66
TTC39A-202ENST00000262676 SCO2A0A1W2PP80 73 aa10.94□□□□□ -0.66
TTC39A-202ENST00000262676 A0A1W2PR77 199 aa10.94□□□□□ -0.66
TTC39A-202ENST00000262676 DXOO77932 396 aaKnown RBP10.94□□□□□ -0.66
TTC39A-202ENST00000262676 MAJINQ3KP22 176 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms