RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 NQO2P16083 231 aa9.25□□□□□ -0.93
TRAF4-202ENST00000262396 CBX5P45973 191 aa9.25□□□□□ -0.93
TRAF4-202ENST00000262396 NR2C2APQ86WQ0 139 aa9.25□□□□□ -0.93
TRAF4-202ENST00000262396 PUSL1Q8N0Z8 303 aaKnown RBP9.25□□□□□ -0.93
TRAF4-202ENST00000262396 OR51H1Q8NH63 302 aa9.25□□□□□ -0.93
TRAF4-202ENST00000262396 CD300LFQ8TDQ1 290 aa9.25□□□□□ -0.93
TRAF4-202ENST00000262396 CACNG8Q8WXS5 425 aa9.25□□□□□ -0.93
TRAF4-202ENST00000262396 HINT2Q9BX68 163 aa9.25□□□□□ -0.93
TRAF4-202ENST00000262396 WFDC10AQ9H1F0 79 aa9.25□□□□□ -0.93
TRAF4-202ENST00000262396 UFC1Q9Y3C8 167 aa9.25□□□□□ -0.93
TRAF4-202ENST00000262396 SSX5O60225 188 aa9.24□□□□□ -0.93
TRAF4-202ENST00000262396 HPRT1P00492 218 aa9.24□□□□□ -0.93
TRAF4-202ENST00000262396 ZNF735P0CB33 412 aa9.24□□□□□ -0.93
TRAF4-202ENST00000262396 RPA2P15927 270 aa9.24□□□□□ -0.93
TRAF4-202ENST00000262396 GPR183P32249 361 aa9.24□□□□□ -0.93
TRAF4-202ENST00000262396 MECP2P51608 486 aaKnown RBP9.24□□□□□ -0.93
TRAF4-202ENST00000262396 TAS2R31P59538 309 aa9.24□□□□□ -0.93
TRAF4-202ENST00000262396 TIMM50Q3ZCQ8 353 aa9.24□□□□□ -0.93
TRAF4-202ENST00000262396 ZNF585BQ52M93 769 aa9.24□□□□□ -0.93
TRAF4-202ENST00000262396 SLC25A24Q6NUK1 477 aa9.24□□□□□ -0.93
TRAF4-202ENST00000262396 BTNL8Q6UX41 500 aa9.24□□□□□ -0.93
TRAF4-202ENST00000262396 HOGA1Q86XE5 327 aa9.24□□□□□ -0.93
TRAF4-202ENST00000262396 GVQW1Q8N7I0 195 aa9.24□□□□□ -0.93
TRAF4-202ENST00000262396 OR1L6Q8NGR2 347 aa9.24□□□□□ -0.93
TRAF4-202ENST00000262396 MARC2Q969Z3 335 aa9.24□□□□□ -0.93
TRAF4-202ENST00000262396 THAP7Q9BT49 309 aaPredicted RBP9.24□□□□□ -0.93
TRAF4-202ENST00000262396 GGTLC1Q9BX51 225 aa9.24□□□□□ -0.93
TRAF4-202ENST00000262396 YTHDF1Q9BYJ9 559 aaKnown RBP9.24□□□□□ -0.93
TRAF4-202ENST00000262396 BET1LQ9NYM9 111 aa9.24□□□□□ -0.93
TRAF4-202ENST00000262396 LOC102724200A0A096LPH7 203 aaPredicted RBP9.23□□□□□ -0.93
TRAF4-202ENST00000262396 A0A0A6YYH2 397 aa9.23□□□□□ -0.93
TRAF4-202ENST00000262396 IGHV3-35A0A0C4DH35 117 aa9.23□□□□□ -0.93
TRAF4-202ENST00000262396 MEIS3P1A6NDR6 274 aa9.23□□□□□ -0.93
TRAF4-202ENST00000262396 A6NJ64 397 aa9.23□□□□□ -0.93
TRAF4-202ENST00000262396 SNAPC5O75971 98 aa9.23□□□□□ -0.93
TRAF4-202ENST00000262396 IGLV2-14P01704 120 aa9.23□□□□□ -0.93
TRAF4-202ENST00000262396 CRYGCP07315 174 aa9.23□□□□□ -0.93
TRAF4-202ENST00000262396 CLEC2LP0C7M8 214 aa9.23□□□□□ -0.93
TRAF4-202ENST00000262396 PTHLHP12272 177 aa9.23□□□□□ -0.93
TRAF4-202ENST00000262396 MYOD1P15172 320 aa9.23□□□□□ -0.93
TRAF4-202ENST00000262396 CTRB1P17538 263 aa9.23□□□□□ -0.93
TRAF4-202ENST00000262396 S100GP29377 79 aa9.23□□□□□ -0.93
TRAF4-202ENST00000262396 SCAND1P57086 179 aa9.23□□□□□ -0.93
TRAF4-202ENST00000262396 MSMO1Q15800 293 aa9.23□□□□□ -0.93
TRAF4-202ENST00000262396 CTRB2Q6GPI1 263 aa9.23□□□□□ -0.93
TRAF4-202ENST00000262396 LAMTOR1Q6IAA8 161 aa9.23□□□□□ -0.93
TRAF4-202ENST00000262396 TMEM61Q8N0U2 210 aa9.23□□□□□ -0.93
TRAF4-202ENST00000262396 S100A16Q96FQ6 103 aaKnown RBP9.23□□□□□ -0.93
TRAF4-202ENST00000262396 QTRT1Q9BXR0 403 aaKnown RBP9.23□□□□□ -0.93
TRAF4-202ENST00000262396 EHFQ9NZC4 300 aa9.23□□□□□ -0.93
TRAF4-202ENST00000262396 DNAH7Q8WXX0 4024 aa9.22□□□□□ -0.93
TRAF4-202ENST00000262396 TENM2Q9NT68 2774 aa9.22□□□□□ -0.93
TRAF4-202ENST00000262396 TNCP24821 2201 aa9.22□□□□□ -0.93
TRAF4-202ENST00000262396 RBMY1BA6NDE4 496 aaKnown RBP9.22□□□□□ -0.93
TRAF4-202ENST00000262396 RBMY1EA6NEQ0 496 aaKnown RBP9.22□□□□□ -0.93
TRAF4-202ENST00000262396 MFSD2BA6NFX1 497 aa9.22□□□□□ -0.93
TRAF4-202ENST00000262396 E7EUB6 86 aa9.22□□□□□ -0.93
TRAF4-202ENST00000262396 RBFOX2O43251 390 aaKnown RBP eCLIP9.22□□□□□ -0.931e-6■□□□□ 9.7
TRAF4-202ENST00000262396 RBMY1DP0C7P1 496 aaKnown RBP9.22□□□□□ -0.93
TRAF4-202ENST00000262396 TRAPPC2P0DI81 140 aa9.22□□□□□ -0.93
TRAF4-202ENST00000262396 TRAPPC2BP0DI82 140 aa9.22□□□□□ -0.93
TRAF4-202ENST00000262396 EDN2P20800 178 aa9.22□□□□□ -0.93
TRAF4-202ENST00000262396 NEDD8Q15843 81 aa9.22□□□□□ -0.93
TRAF4-202ENST00000262396 TM4SF20Q53R12 229 aa9.22□□□□□ -0.93
TRAF4-202ENST00000262396 THOC7Q6I9Y2 204 aaKnown RBP9.22□□□□□ -0.93
TRAF4-202ENST00000262396 CMTM1Q8IZ96 169 aa9.22□□□□□ -0.93
TRAF4-202ENST00000262396 UBAC2Q8NBM4 344 aa9.22□□□□□ -0.93
TRAF4-202ENST00000262396 OR5AP2Q8NGF4 316 aa9.22□□□□□ -0.93
TRAF4-202ENST00000262396 OR5H6Q8NGV6 325 aa9.22□□□□□ -0.93
TRAF4-202ENST00000262396 CCDC140Q96MF4 163 aa9.22□□□□□ -0.93
TRAF4-202ENST00000262396 FANCD2OSQ96PS1 177 aa9.22□□□□□ -0.93
TRAF4-202ENST00000262396 C20orf24Q9BUV8 137 aa9.22□□□□□ -0.93
TRAF4-202ENST00000262396 AUNIPQ9H7T9 357 aa9.22□□□□□ -0.93
TRAF4-202ENST00000262396 TMEM140Q9NV12 185 aa9.22□□□□□ -0.93
TRAF4-202ENST00000262396 IGLV11-55A0A075B6I3 123 aa9.21□□□□□ -0.94
TRAF4-202ENST00000262396 TRAV25A0A0B4J276 109 aa9.21□□□□□ -0.94
TRAF4-202ENST00000262396 TMEM213A2RRL7 107 aa9.21□□□□□ -0.94
TRAF4-202ENST00000262396 CXorf65A6NEN9 183 aa9.21□□□□□ -0.94
TRAF4-202ENST00000262396 UPK2O00526 184 aa9.21□□□□□ -0.94
TRAF4-202ENST00000262396 ATP6V1G2O95670 118 aa9.21□□□□□ -0.94
TRAF4-202ENST00000262396 OR13C7P0DN81 318 aa9.21□□□□□ -0.94
TRAF4-202ENST00000262396 APOC4P55056 127 aa9.21□□□□□ -0.94
TRAF4-202ENST00000262396 OR2B8PP59922 312 aa9.21□□□□□ -0.94
TRAF4-202ENST00000262396 Q56UQ5 140 aa9.21□□□□□ -0.94
TRAF4-202ENST00000262396 ZNF773Q6PK81 442 aa9.21□□□□□ -0.94
TRAF4-202ENST00000262396 HSD17B13Q7Z5P4 300 aaPredicted RBP9.21□□□□□ -0.94
TRAF4-202ENST00000262396 OR2C3Q8N628 320 aa9.21□□□□□ -0.94
TRAF4-202ENST00000262396 OR1L8Q8NGR8 309 aa9.21□□□□□ -0.94
TRAF4-202ENST00000262396 OR5H2Q8NGV7 314 aa9.21□□□□□ -0.94
TRAF4-202ENST00000262396 SRSF8Q9BRL6 282 aaKnown RBP9.21□□□□□ -0.94
TRAF4-202ENST00000262396 MRPL27Q9P0M9 148 aaKnown RBP9.21□□□□□ -0.94
TRAF4-202ENST00000262396 MLXQ9UH92 298 aa9.21□□□□□ -0.94
TRAF4-202ENST00000262396 OR2T8A6NH00 312 aa9.2□□□□□ -0.94
TRAF4-202ENST00000262396 A8MWP6 167 aa9.2□□□□□ -0.94
TRAF4-202ENST00000262396 S1PR2O95136 353 aa9.2□□□□□ -0.94
TRAF4-202ENST00000262396 RLN1P04808 185 aa9.2□□□□□ -0.94
TRAF4-202ENST00000262396 PTBP1P26599 531 aaKnown RBP eCLIP9.2□□□□□ -0.94
TRAF4-202ENST00000262396 EIF4EBP1Q13541 118 aaPredicted RBP9.2□□□□□ -0.94
TRAF4-202ENST00000262396 PMS2P11Q13670 270 aa9.2□□□□□ -0.94
TRAF4-202ENST00000262396 TMEM69Q5SWH9 247 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 174.2 ms