RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 R3HDM4Q96D70 268 aa9.2□□□□□ -0.94
PFDN1-201ENST00000261813 TSNAXQ99598 290 aaKnown RBP9.2□□□□□ -0.94
PFDN1-201ENST00000261813 NPFFR1Q9GZQ6 430 aa9.2□□□□□ -0.94
PFDN1-201ENST00000261813 ZNF702PQ9H963 129 aa9.2□□□□□ -0.94
PFDN1-201ENST00000261813 COA4Q9NYJ1 87 aa9.2□□□□□ -0.94
PFDN1-201ENST00000261813 MOB4Q9Y3A3 225 aa9.2□□□□□ -0.94
PFDN1-201ENST00000261813 SH2D7A6NKC9 451 aaPredicted RBP9.19□□□□□ -0.94
PFDN1-201ENST00000261813 MARCH11A6NNE9 402 aa9.19□□□□□ -0.94
PFDN1-201ENST00000261813 SHOXO15266 292 aa9.19□□□□□ -0.94
PFDN1-201ENST00000261813 ADAP1O75689 374 aa9.19□□□□□ -0.94
PFDN1-201ENST00000261813 MOSP00540 346 aa9.19□□□□□ -0.94
PFDN1-201ENST00000261813 KRASP01116 189 aa9.19□□□□□ -0.94
PFDN1-201ENST00000261813 FGF2P09038 288 aa9.19□□□□□ -0.94
PFDN1-201ENST00000261813 PET100P0DJ07 73 aa9.19□□□□□ -0.94
PFDN1-201ENST00000261813 CXCL3P19876 107 aa9.19□□□□□ -0.94
PFDN1-201ENST00000261813 MDKP21741 143 aaPredicted RBP9.19□□□□□ -0.94
PFDN1-201ENST00000261813 COMPP49747 757 aaPredicted RBP9.19□□□□□ -0.94
PFDN1-201ENST00000261813 BRWD1-AS2P59051 145 aa9.19□□□□□ -0.94
PFDN1-201ENST00000261813 BLCAPP62952 87 aa9.19□□□□□ -0.94
PFDN1-201ENST00000261813 CD83Q01151 205 aa9.19□□□□□ -0.94
PFDN1-201ENST00000261813 FOXL1Q12952 345 aa9.19□□□□□ -0.94
PFDN1-201ENST00000261813 IAH1Q2TAA2 248 aaPredicted RBP9.19□□□□□ -0.94
PFDN1-201ENST00000261813 NMSQ5H8A3 153 aa9.19□□□□□ -0.94
PFDN1-201ENST00000261813 OR4A5Q8NH83 315 aa9.19□□□□□ -0.94
PFDN1-201ENST00000261813 LINC01006Q8NI28 216 aa9.19□□□□□ -0.94
PFDN1-201ENST00000261813 LHFPL5Q8TAF8 219 aa9.19□□□□□ -0.94
PFDN1-201ENST00000261813 SEC22AQ96IW7 307 aa9.19□□□□□ -0.94
PFDN1-201ENST00000261813 RITA1Q96K30 269 aa9.19□□□□□ -0.94
PFDN1-201ENST00000261813 RHOVQ96L33 236 aa9.19□□□□□ -0.94
PFDN1-201ENST00000261813 NEURL2Q9BR09 285 aa9.19□□□□□ -0.94
PFDN1-201ENST00000261813 C16orf95Q9H693 158 aa9.19□□□□□ -0.94
PFDN1-201ENST00000261813 RANBP3Q9H6Z4 567 aaPredicted RBP9.19□□□□□ -0.94
PFDN1-201ENST00000261813 PLSCR3Q9NRY6 295 aa9.19□□□□□ -0.94
PFDN1-201ENST00000261813 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.19□□□□□ -0.94
PFDN1-201ENST00000261813 S1PR2O95136 353 aa9.18□□□□□ -0.94
PFDN1-201ENST00000261813 SPDEFO95238 335 aa9.18□□□□□ -0.94
PFDN1-201ENST00000261813 LY86O95711 162 aa9.18□□□□□ -0.94
PFDN1-201ENST00000261813 RLN2P04090 185 aa9.18□□□□□ -0.94
PFDN1-201ENST00000261813 F2RL1P55085 397 aa9.18□□□□□ -0.94
PFDN1-201ENST00000261813 H2BFSP57053 126 aa9.18□□□□□ -0.94
PFDN1-201ENST00000261813 RPS16P62249 146 aaKnown RBP9.18□□□□□ -0.94
PFDN1-201ENST00000261813 ID3Q02535 119 aa9.18□□□□□ -0.94
PFDN1-201ENST00000261813 SMCO1Q147U7 214 aa9.18□□□□□ -0.94
PFDN1-201ENST00000261813 VMA21Q3ZAQ7 101 aa9.18□□□□□ -0.94
PFDN1-201ENST00000261813 AWAT1Q58HT5 328 aa9.18□□□□□ -0.94
PFDN1-201ENST00000261813 C12orf54Q6X4T0 127 aa9.18□□□□□ -0.94
PFDN1-201ENST00000261813 Q8N2B8 174 aa9.18□□□□□ -0.94
PFDN1-201ENST00000261813 OR8H1Q8NGG4 311 aa9.18□□□□□ -0.94
PFDN1-201ENST00000261813 OR4F5Q8NH21 305 aa9.18□□□□□ -0.94
PFDN1-201ENST00000261813 HARBI1Q96MB7 349 aa9.18□□□□□ -0.94
PFDN1-201ENST00000261813 FKBP11Q9NYL4 201 aa9.18□□□□□ -0.94
PFDN1-201ENST00000261813 PRR13Q9NZ81 148 aa9.18□□□□□ -0.94
PFDN1-201ENST00000261813 SIGLEC9Q9Y336 463 aa9.18□□□□□ -0.94
PFDN1-201ENST00000261813 FAM90A26D6RGX4 464 aa9.17□□□□□ -0.94
PFDN1-201ENST00000261813 FGF16O43320 207 aa9.17□□□□□ -0.94
PFDN1-201ENST00000261813 IGKV1-39P01597 117 aa9.17□□□□□ -0.94
PFDN1-201ENST00000261813 IGKV1-16P04430 117 aa9.17□□□□□ -0.94
PFDN1-201ENST00000261813 IGKV1D-39P04432 117 aa9.17□□□□□ -0.94
PFDN1-201ENST00000261813 CNTFRP26992 372 aa9.17□□□□□ -0.94
PFDN1-201ENST00000261813 ADMP35318 185 aa9.17□□□□□ -0.94
PFDN1-201ENST00000261813 G6PCP35575 357 aa9.17□□□□□ -0.94
PFDN1-201ENST00000261813 IQCF2Q8IXL9 164 aa9.17□□□□□ -0.94
PFDN1-201ENST00000261813 C5orf56Q8N8D9 126 aa9.17□□□□□ -0.94
PFDN1-201ENST00000261813 Q8N9W7 124 aa9.17□□□□□ -0.94
PFDN1-201ENST00000261813 TEX45Q8NA69 505 aa9.17□□□□□ -0.94
PFDN1-201ENST00000261813 ZBTB8BQ8NAP8 495 aaPredicted RBP9.17□□□□□ -0.94
PFDN1-201ENST00000261813 OR2T35Q8NGX2 323 aa9.17□□□□□ -0.94
PFDN1-201ENST00000261813 OR4A16Q8NH70 328 aa9.17□□□□□ -0.94
PFDN1-201ENST00000261813 OR1S1Q8NH92 325 aa9.17□□□□□ -0.94
PFDN1-201ENST00000261813 GPR146Q96CH1 333 aa9.17□□□□□ -0.94
PFDN1-201ENST00000261813 ST6GAL2Q96JF0 529 aa9.17□□□□□ -0.94
PFDN1-201ENST00000261813 FANCD2OSQ96PS1 177 aa9.17□□□□□ -0.94
PFDN1-201ENST00000261813 FYTTD1Q96QD9 318 aaKnown RBP9.17□□□□□ -0.94
PFDN1-201ENST00000261813 RANGRFQ9HD47 186 aaPredicted RBP9.17□□□□□ -0.94
PFDN1-201ENST00000261813 BET1LQ9NYM9 111 aa9.17□□□□□ -0.94
PFDN1-201ENST00000261813 GSKIPQ9P0R6 139 aa9.17□□□□□ -0.94
PFDN1-201ENST00000261813 CLPSL1A2RUU4 121 aa9.16□□□□□ -0.94
PFDN1-201ENST00000261813 NCBP2LA6PVI3 153 aaKnown RBP9.16□□□□□ -0.94
PFDN1-201ENST00000261813 M0QZK8 103 aa9.16□□□□□ -0.94
PFDN1-201ENST00000261813 CCSO14618 274 aa9.16□□□□□ -0.94
PFDN1-201ENST00000261813 ST8SIA3O43173 380 aa9.16□□□□□ -0.94
PFDN1-201ENST00000261813 RBMXL2O75526 392 aaKnown RBP9.16□□□□□ -0.94
PFDN1-201ENST00000261813 MED6O75586 246 aa9.16□□□□□ -0.94
PFDN1-201ENST00000261813 SIX6O95475 246 aa9.16□□□□□ -0.94
PFDN1-201ENST00000261813 IGKV1-5P01602 117 aa9.16□□□□□ -0.94
PFDN1-201ENST00000261813 PSMB6P28072 239 aa9.16□□□□□ -0.94
PFDN1-201ENST00000261813 UBE2KP61086 200 aa9.16□□□□□ -0.94
PFDN1-201ENST00000261813 MMDQ15546 238 aa9.16□□□□□ -0.94
PFDN1-201ENST00000261813 C2orf68Q2NKX9 166 aa9.16□□□□□ -0.94
PFDN1-201ENST00000261813 FAM71E2Q8N5Q1 922 aa9.16□□□□□ -0.94
PFDN1-201ENST00000261813 THAP6Q8TBB0 222 aa9.16□□□□□ -0.94
PFDN1-201ENST00000261813 OR10C1Q96KK4 312 aa9.16□□□□□ -0.94
PFDN1-201ENST00000261813 PRSS22Q9GZN4 317 aa9.16□□□□□ -0.94
PFDN1-201ENST00000261813 TMEM140Q9NV12 185 aa9.16□□□□□ -0.94
PFDN1-201ENST00000261813 KIAA1456Q9P272 454 aa9.16□□□□□ -0.94
PFDN1-201ENST00000261813 PRNDQ9UKY0 176 aa9.16□□□□□ -0.94
PFDN1-201ENST00000261813 A0A1B0GUS0 222 aa9.15□□□□□ -0.94
PFDN1-201ENST00000261813 NBR2O15453 112 aa9.15□□□□□ -0.94
PFDN1-201ENST00000261813 P0C879 139 aa9.15□□□□□ -0.94
PFDN1-201ENST00000261813 PVALBP20472 110 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms