RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 IGLC2P0DOY2 106 aa15.73■□□□□ 0.11
COL4A3BP-201ENST00000261415 IGLC3P0DOY3 106 aa15.73■□□□□ 0.11
COL4A3BP-201ENST00000261415 SRPXP78539 464 aa15.73■□□□□ 0.11
COL4A3BP-201ENST00000261415 SRSF1Q07955 248 aaKnown RBP eCLIP15.73■□□□□ 0.113e-6■■■■□ 19.7
COL4A3BP-201ENST00000261415 CLEC12BQ2HXU8 276 aa15.73■□□□□ 0.11
COL4A3BP-201ENST00000261415 SPATA45Q537H7 98 aa15.73■□□□□ 0.11
COL4A3BP-201ENST00000261415 LDLRAD2Q5SZI1 272 aa15.73■□□□□ 0.11
COL4A3BP-201ENST00000261415 LHFPL4Q7Z7J7 247 aa15.73■□□□□ 0.11
COL4A3BP-201ENST00000261415 MKXQ8IYA7 352 aa15.73■□□□□ 0.11
COL4A3BP-201ENST00000261415 S100A7P31151 101 aa15.72■□□□□ 0.11
COL4A3BP-201ENST00000261415 NPBWR2P48146 333 aa15.72■□□□□ 0.11
COL4A3BP-201ENST00000261415 RHOGP84095 191 aa15.72■□□□□ 0.11
COL4A3BP-201ENST00000261415 BATF2Q8N1L9 274 aa15.72■□□□□ 0.11
COL4A3BP-201ENST00000261415 PECRQ9BY49 303 aa15.72■□□□□ 0.11
COL4A3BP-201ENST00000261415 SLC35D1Q9NTN3 355 aa15.72■□□□□ 0.11
COL4A3BP-201ENST00000261415 MTCH1Q9NZJ7 389 aa15.72■□□□□ 0.11
COL4A3BP-201ENST00000261415 SPTAN1Q13813 2472 aaKnown RBP15.72■□□□□ 0.11
COL4A3BP-201ENST00000261415 SPRY3O43610 288 aa15.71■□□□□ 0.11
COL4A3BP-201ENST00000261415 RHBDL1O75783 438 aa15.71■□□□□ 0.11
COL4A3BP-201ENST00000261415 VENTXO95231 258 aa15.71■□□□□ 0.11
COL4A3BP-201ENST00000261415 BCL3P20749 454 aa15.71■□□□□ 0.11
COL4A3BP-201ENST00000261415 MSMO1Q15800 293 aa15.71■□□□□ 0.11
COL4A3BP-201ENST00000261415 ZNF672Q499Z4 452 aaPredicted RBP15.71■□□□□ 0.11
COL4A3BP-201ENST00000261415 TANC2Q9HCD6 1990 aa15.71■□□□□ 0.11
COL4A3BP-201ENST00000261415 RAI1Q7Z5J4 1906 aaPredicted RBP15.71■□□□□ 0.11
COL4A3BP-201ENST00000261415 HYPMO75409 117 aa15.71■□□□□ 0.11
COL4A3BP-201ENST00000261415 CD33P20138 364 aa15.71■□□□□ 0.11
COL4A3BP-201ENST00000261415 AADACP22760 399 aa15.71■□□□□ 0.11
COL4A3BP-201ENST00000261415 IL3RAP26951 378 aa15.71■□□□□ 0.11
COL4A3BP-201ENST00000261415 BLVRBP30043 206 aaPredicted RBP15.71■□□□□ 0.11
COL4A3BP-201ENST00000261415 CDKN1AP38936 164 aa15.71■□□□□ 0.11
COL4A3BP-201ENST00000261415 FGF8P55075 233 aaPredicted RBP15.71■□□□□ 0.11
COL4A3BP-201ENST00000261415 MZT1Q08AG7 82 aa15.71■□□□□ 0.11
COL4A3BP-201ENST00000261415 PRAMEF6Q5VXH4 476 aa15.71■□□□□ 0.11
COL4A3BP-201ENST00000261415 UNQ5815/PRO19632Q6UWF5 114 aa15.71■□□□□ 0.11
COL4A3BP-201ENST00000261415 GPR146Q96CH1 333 aa15.71■□□□□ 0.11
COL4A3BP-201ENST00000261415 PATZ1Q9HBE1 687 aaKnown RBP15.71■□□□□ 0.11
COL4A3BP-201ENST00000261415 IL19Q9UHD0 177 aa15.71■□□□□ 0.11
COL4A3BP-201ENST00000261415 FOXI3A8MTJ6 420 aaPredicted RBP15.7■□□□□ 0.1
COL4A3BP-201ENST00000261415 TRAPPC2LH3BP13 241 aa15.7■□□□□ 0.1
COL4A3BP-201ENST00000261415 CDIPTO14735 213 aa15.7■□□□□ 0.1
COL4A3BP-201ENST00000261415 COMPP49747 757 aaPredicted RBP15.7■□□□□ 0.1
COL4A3BP-201ENST00000261415 LCN15Q6UWW0 184 aa15.7■□□□□ 0.1
COL4A3BP-201ENST00000261415 TM2D1Q9BX74 207 aa15.7■□□□□ 0.1
COL4A3BP-201ENST00000261415 ZNF430Q9H8G1 570 aaPredicted RBP15.7■□□□□ 0.1
COL4A3BP-201ENST00000261415 RPRMQ9NS64 109 aa15.7■□□□□ 0.1
COL4A3BP-201ENST00000261415 POLDIP2Q9Y2S7 368 aa15.7■□□□□ 0.1
COL4A3BP-201ENST00000261415 A0A0U1RQK1 487 aa15.7■□□□□ 0.1
COL4A3BP-201ENST00000261415 ZNF320A2RRD8 509 aa15.7■□□□□ 0.1
COL4A3BP-201ENST00000261415 IGHV1-46P01743 117 aa15.7■□□□□ 0.1
COL4A3BP-201ENST00000261415 MEF2BQ02080 365 aaPredicted RBP15.7■□□□□ 0.1
COL4A3BP-201ENST00000261415 OSR2Q8N2R0 312 aa15.7■□□□□ 0.1
COL4A3BP-201ENST00000261415 Q96M66 194 aa15.7■□□□□ 0.1
COL4A3BP-201ENST00000261415 ZNF488Q96MN9 340 aa15.7■□□□□ 0.1
COL4A3BP-201ENST00000261415 OR2V2Q96R30 315 aa15.7■□□□□ 0.1
COL4A3BP-201ENST00000261415 NECAP2Q9NVZ3 263 aa15.7■□□□□ 0.1
COL4A3BP-201ENST00000261415 ANXA10Q9UJ72 324 aa15.7■□□□□ 0.1
COL4A3BP-201ENST00000261415 LRRK2Q5S007 2527 aa15.69■□□□□ 0.1
COL4A3BP-201ENST00000261415 UTP20O75691 2785 aaKnown RBP15.69■□□□□ 0.1
COL4A3BP-201ENST00000261415 ZNF737O75373 536 aa15.69■□□□□ 0.1
COL4A3BP-201ENST00000261415 EFNB3Q15768 340 aa15.69■□□□□ 0.1
COL4A3BP-201ENST00000261415 VAMP3Q15836 100 aa15.69■□□□□ 0.1
COL4A3BP-201ENST00000261415 MEX3BQ6ZN04 569 aaKnown RBP15.69■□□□□ 0.1
COL4A3BP-201ENST00000261415 C11orf53Q8IXP5 236 aa15.69■□□□□ 0.1
COL4A3BP-201ENST00000261415 CCDC71LQ8N9Z2 235 aa15.69■□□□□ 0.1
COL4A3BP-201ENST00000261415 OR5B3Q8NH48 314 aa15.69■□□□□ 0.1
COL4A3BP-201ENST00000261415 DCHS2Q6V1P9 2916 aa15.69■□□□□ 0.1
COL4A3BP-201ENST00000261415 CST7O76096 145 aa15.69■□□□□ 0.1
COL4A3BP-201ENST00000261415 CD99P14209 185 aa15.69■□□□□ 0.1
COL4A3BP-201ENST00000261415 PNKDQ8N490 385 aa15.69■□□□□ 0.1
COL4A3BP-201ENST00000261415 TCTEX1D1Q8N7M0 179 aa15.69■□□□□ 0.1
COL4A3BP-201ENST00000261415 MRPL27Q9P0M9 148 aaKnown RBP15.69■□□□□ 0.1
COL4A3BP-201ENST00000261415 RNF24Q9Y225 148 aa15.69■□□□□ 0.1
COL4A3BP-201ENST00000261415 SSSCA1O60232 199 aa15.68■□□□□ 0.1
COL4A3BP-201ENST00000261415 YPEL3P61236 119 aaPredicted RBP15.68■□□□□ 0.1
COL4A3BP-201ENST00000261415 PIGYQ3MUY2 71 aa15.68■□□□□ 0.1
COL4A3BP-201ENST00000261415 SPRNQ5BIV9 151 aa15.68■□□□□ 0.1
COL4A3BP-201ENST00000261415 PRR27Q6MZM9 219 aa15.68■□□□□ 0.1
COL4A3BP-201ENST00000261415 ZNF826PQ6ZT77 177 aa15.68■□□□□ 0.1
COL4A3BP-201ENST00000261415 TMEM217Q8N7C4 229 aa15.68■□□□□ 0.1
COL4A3BP-201ENST00000261415 ZNF586Q9NXT0 402 aa15.68■□□□□ 0.1
COL4A3BP-201ENST00000261415 ARID1AO14497 2285 aa15.68■□□□□ 0.1
COL4A3BP-201ENST00000261415 IGHV1-69-2A0A0G2JMI3 117 aa15.68■□□□□ 0.1
COL4A3BP-201ENST00000261415 A0A1B0GUS0 222 aa15.68■□□□□ 0.1
COL4A3BP-201ENST00000261415 C17orf100A8MU93 164 aa15.68■□□□□ 0.1
COL4A3BP-201ENST00000261415 B9A039 149 aa15.68■□□□□ 0.1
COL4A3BP-201ENST00000261415 DIRC3C9JPN6 131 aa15.68■□□□□ 0.1
COL4A3BP-201ENST00000261415 FGF12P61328 243 aa15.68■□□□□ 0.1
COL4A3BP-201ENST00000261415 FOXL1Q12952 345 aa15.68■□□□□ 0.1
COL4A3BP-201ENST00000261415 TMEM144Q7Z5S9 345 aa15.68■□□□□ 0.1
COL4A3BP-201ENST00000261415 MUC15Q8N387 334 aa15.68■□□□□ 0.1
COL4A3BP-201ENST00000261415 ITLN1Q8WWA0 313 aa15.68■□□□□ 0.1
COL4A3BP-201ENST00000261415 DYRK2Q92630 601 aa15.68■□□□□ 0.1
COL4A3BP-201ENST00000261415 PSMG3Q9BT73 122 aaPredicted RBP15.68■□□□□ 0.1
COL4A3BP-201ENST00000261415 IGKV1D-8A0A087WSZ0 117 aa15.67■□□□□ 0.1
COL4A3BP-201ENST00000261415 PHF1O43189 567 aaPredicted RBP15.67■□□□□ 0.1
COL4A3BP-201ENST00000261415 ADH4P08319 380 aa15.67■□□□□ 0.1
COL4A3BP-201ENST00000261415 RBM11P57052 281 aaKnown RBP15.67■□□□□ 0.1
COL4A3BP-201ENST00000261415 SERF2P84101 59 aa15.67■□□□□ 0.1
COL4A3BP-201ENST00000261415 TNFAIP6P98066 277 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms