RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 OR4C13Q8NGP0 309 aa8.29□□□□□ -1.08
CTDSPL2-201ENST00000260327 NHP2Q9NX24 153 aaKnown RBP8.29□□□□□ -1.08
CTDSPL2-201ENST00000260327 FREM3P0C091 2139 aa8.29□□□□□ -1.08
CTDSPL2-201ENST00000260327 DLL1O00548 723 aa8.29□□□□□ -1.08
CTDSPL2-201ENST00000260327 LINC00614P0C842 121 aa8.29□□□□□ -1.08
CTDSPL2-201ENST00000260327 ARHGEF17Q96PE2 2063 aaPredicted RBP8.29□□□□□ -1.08
CTDSPL2-201ENST00000260327 TNFSF13O75888 250 aa8.29□□□□□ -1.08
CTDSPL2-201ENST00000260327 ADCYAP1P18509 176 aa8.29□□□□□ -1.08
CTDSPL2-201ENST00000260327 UBALD2Q8IYN6 164 aa8.29□□□□□ -1.08
CTDSPL2-201ENST00000260327 NFAM1Q8NET5 270 aaPredicted RBP8.29□□□□□ -1.08
CTDSPL2-201ENST00000260327 RNF7Q9UBF6 113 aa8.29□□□□□ -1.08
CTDSPL2-201ENST00000260327 PROB1E7EW31 1015 aa8.29□□□□□ -1.08
CTDSPL2-201ENST00000260327 CD33P20138 364 aa8.29□□□□□ -1.08
CTDSPL2-201ENST00000260327 FBXW9Q5XUX1 488 aa8.29□□□□□ -1.08
CTDSPL2-201ENST00000260327 MBD3L1Q8WWY6 194 aa8.29□□□□□ -1.08
CTDSPL2-201ENST00000260327 C5orf30Q96GV9 206 aa8.29□□□□□ -1.08
CTDSPL2-201ENST00000260327 HES7Q9BYE0 225 aa8.29□□□□□ -1.08
CTDSPL2-201ENST00000260327 SEMA5BQ9P283 1151 aa8.29□□□□□ -1.08
CTDSPL2-201ENST00000260327 TRAV9-2A0A087WT02 112 aa8.29□□□□□ -1.08
CTDSPL2-201ENST00000260327 ANOS1P23352 680 aa8.29□□□□□ -1.08
CTDSPL2-201ENST00000260327 SCNM1Q9BWG6 230 aa8.29□□□□□ -1.08
CTDSPL2-201ENST00000260327 OR11H12B2RN74 326 aa8.29□□□□□ -1.08
CTDSPL2-201ENST00000260327 BHLHA15Q7RTS1 189 aaPredicted RBP8.29□□□□□ -1.08
CTDSPL2-201ENST00000260327 OR11H1Q8NG94 326 aa8.29□□□□□ -1.08
CTDSPL2-201ENST00000260327 OR11H2Q8NH07 326 aa8.29□□□□□ -1.08
CTDSPL2-201ENST00000260327 TCF19Q9Y242 345 aa8.29□□□□□ -1.08
CTDSPL2-201ENST00000260327 RFNGQ9Y644 331 aa8.29□□□□□ -1.08
CTDSPL2-201ENST00000260327 IGHMP01871 453 aa8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 FCGR2BP31994 310 aaPredicted RBP8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 TBR1Q16650 682 aa8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 GFRALQ6UXV0 394 aa8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 SRXN1Q9BYN0 137 aa8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 VSIRQ9H7M9 311 aa8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 MPDZO75970 2070 aa8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 C1orf194Q5T5A4 169 aa8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 ZNF714Q96N38 554 aa8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 FOXC2Q99958 501 aa8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 LPAR2Q9HBW0 351 aa8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 IGKV3D-15A0A087WSY6 115 aa8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 IGKV3-15P01624 115 aa8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 ECSCRQ19T08 205 aa8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 TMEM95Q3KNT9 176 aa8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 LINC00114Q6XXX2 140 aa8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 MOSP00540 346 aa8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 BMI1P35226 326 aa8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 RNFT1Q5M7Z0 435 aa8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 TCF24Q7RTU0 167 aa8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 ZNF525Q8N782 197 aa8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 CYTL1Q9NRR1 136 aa8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 TRAV8-2A0A0B4J237 113 aa8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 IGKV3-11P04433 115 aa8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 MST1P26927 711 aa8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 DLX6P56179 175 aa8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 TMEM256Q8N2U0 113 aa8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 PRELID3AQ96N28 172 aa8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 CCL13Q99616 98 aa8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 RABAC1Q9UI14 185 aa8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 ZNF257Q9Y2Q1 563 aa8.28□□□□□ -1.08
CTDSPL2-201ENST00000260327 PEAR1Q5VY43 1037 aaPredicted RBP8.27□□□□□ -1.08
CTDSPL2-201ENST00000260327 TTTY12Q9BZ98 90 aa8.27□□□□□ -1.08
CTDSPL2-201ENST00000260327 TRBV20OR9-2A0A075B6H5 130 aa8.27□□□□□ -1.09
CTDSPL2-201ENST00000260327 HSPE1P61604 102 aaKnown RBP8.27□□□□□ -1.09
CTDSPL2-201ENST00000260327 SLX1AQ9BQ83 275 aa8.27□□□□□ -1.09
CTDSPL2-201ENST00000260327 GTSF1LQ9H1H1 148 aa8.27□□□□□ -1.09
CTDSPL2-201ENST00000260327 MED12Q93074 2177 aa8.27□□□□□ -1.09
CTDSPL2-201ENST00000260327 IGHV1-45A0A0A0MS14 117 aa8.27□□□□□ -1.09
CTDSPL2-201ENST00000260327 SFTPCP11686 197 aa8.27□□□□□ -1.09
CTDSPL2-201ENST00000260327 IGFBP2P18065 325 aa8.27□□□□□ -1.09
CTDSPL2-201ENST00000260327 RPL8P62917 257 aaKnown RBP8.27□□□□□ -1.09
CTDSPL2-201ENST00000260327 DEFB123Q8N688 67 aa8.27□□□□□ -1.09
CTDSPL2-201ENST00000260327 SP7Q8TDD2 431 aaPredicted RBP8.27□□□□□ -1.09
CTDSPL2-201ENST00000260327 RPL27AP46776 148 aaKnown RBP8.27□□□□□ -1.09
CTDSPL2-201ENST00000260327 IGLV3-21P80748 117 aaPredicted RBP8.27□□□□□ -1.09
CTDSPL2-201ENST00000260327 TMEM78Q5T7P6 136 aa8.27□□□□□ -1.09
CTDSPL2-201ENST00000260327 TMEM108Q6UXF1 575 aa8.27□□□□□ -1.09
CTDSPL2-201ENST00000260327 MAFAQ8NHW3 353 aaPredicted RBP8.27□□□□□ -1.09
CTDSPL2-201ENST00000260327 NPIPB3Q92617 1050 aa8.27□□□□□ -1.09
CTDSPL2-201ENST00000260327 CRIM1Q9NZV1 1036 aa8.27□□□□□ -1.09
CTDSPL2-201ENST00000260327 XIRP1Q702N8 1843 aaKnown RBP8.27□□□□□ -1.09
CTDSPL2-201ENST00000260327 ODAMA1E959 279 aa8.27□□□□□ -1.09
CTDSPL2-201ENST00000260327 NDUFA3O95167 84 aa8.27□□□□□ -1.09
CTDSPL2-201ENST00000260327 IFI6P09912 130 aa8.27□□□□□ -1.09
CTDSPL2-201ENST00000260327 SELENOTP62341 195 aa8.27□□□□□ -1.09
CTDSPL2-201ENST00000260327 SLC25A45Q8N413 288 aa8.27□□□□□ -1.09
CTDSPL2-201ENST00000260327 GBF1Q92538 1859 aa8.26□□□□□ -1.09
CTDSPL2-201ENST00000260327 PSG1P11464 419 aa8.26□□□□□ -1.09
CTDSPL2-201ENST00000260327 GATA2P23769 480 aaPredicted RBP8.26□□□□□ -1.09
CTDSPL2-201ENST00000260327 CEACAM3P40198 252 aa8.26□□□□□ -1.09
CTDSPL2-201ENST00000260327 TDGF1P3P51864 188 aa8.26□□□□□ -1.09
CTDSPL2-201ENST00000260327 CKS1BP61024 79 aa8.26□□□□□ -1.09
CTDSPL2-201ENST00000260327 MIR17HGQ75NE6 70 aa8.26□□□□□ -1.09
CTDSPL2-201ENST00000260327 LINC00305Q7Z4B0 112 aa8.26□□□□□ -1.09
CTDSPL2-201ENST00000260327 LOXL4Q96JB6 756 aa8.26□□□□□ -1.09
CTDSPL2-201ENST00000260327 HEATR5BQ9P2D3 2071 aa8.26□□□□□ -1.09
CTDSPL2-201ENST00000260327 HIGD1CA8MV81 97 aa8.26□□□□□ -1.09
CTDSPL2-201ENST00000260327 KLK10O43240 276 aa8.26□□□□□ -1.09
CTDSPL2-201ENST00000260327 NAPSAO96009 420 aa8.26□□□□□ -1.09
CTDSPL2-201ENST00000260327 CD55P08174 381 aa8.26□□□□□ -1.09
CTDSPL2-201ENST00000260327 IGFBP3P17936 291 aaPredicted RBP8.26□□□□□ -1.09
CTDSPL2-201ENST00000260327 OR2K2Q8NGT1 345 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms