RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 FAM90A5PA8MXJ8 464 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 FAM90A23PA8MXZ1 464 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 E7EUB6 86 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 FAM90A15PP0C7V4 464 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 FAM90A13PP0C7W8 464 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 FAM90A14PP0C7W9 464 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 FAM90A24PP0C7X0 464 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 ORM2P19652 201 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 LRRC10Q5BKY1 277 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 TMEM200BQ69YZ2 307 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 SLC16A13Q7RTY0 426 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 OR10A7Q8NGE5 316 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 RAB24Q969Q5 203 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 RAB40CQ96S21 281 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 NIPSNAP3BQ9BS92 247 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 AGMATQ9BSE5 352 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 MBNL3Q9NUK0 354 aaKnown RBP7.47□□□□□ -1.21
CKAP2-201ENST00000258607 OR6C3Q9NZP0 311 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 TCF19Q9Y242 345 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 TIMP3P35625 211 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 ATP5G3P48201 142 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 TCL1AP56279 114 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 NDUFA6P56556 154 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 TLE4Q04727 773 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 FAM78BQ5VT40 261 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 Q6ZSR3 168 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 ZNF714Q96N38 554 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 ZNF251Q9BRH9 671 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 IFI27L2Q9H2X8 130 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 MS4A5Q9H3V2 200 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 ZNF355PQ9NSJ1 428 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 FGF16O43320 207 aa7.46□□□□□ -1.21
CKAP2-201ENST00000258607 PITX3O75364 302 aa7.46□□□□□ -1.21
CKAP2-201ENST00000258607 CA2P00918 260 aa7.46□□□□□ -1.21
CKAP2-201ENST00000258607 IGFBP2P18065 325 aa7.46□□□□□ -1.21
CKAP2-201ENST00000258607 FAM3BP58499 235 aaPredicted RBP7.46□□□□□ -1.21
CKAP2-201ENST00000258607 TAS2R30P59541 319 aa7.46□□□□□ -1.21
CKAP2-201ENST00000258607 GUSBP1Q15486 140 aa7.46□□□□□ -1.21
CKAP2-201ENST00000258607 C17orf58Q2M2W7 97 aa7.46□□□□□ -1.21
CKAP2-201ENST00000258607 RBMS3Q6XE24 437 aaKnown RBP7.46□□□□□ -1.21
CKAP2-201ENST00000258607 OR4P4Q8NGL7 312 aa7.46□□□□□ -1.21
CKAP2-201ENST00000258607 OR9G1Q8NH87 305 aa7.46□□□□□ -1.21
CKAP2-201ENST00000258607 SMIM8Q96KF7 97 aa7.46□□□□□ -1.21
CKAP2-201ENST00000258607 SLC35B3Q9H1N7 401 aa7.46□□□□□ -1.21
CKAP2-201ENST00000258607 ITPR3Q14573 2671 aa7.46□□□□□ -1.21
CKAP2-201ENST00000258607 KBTBD11-OT1A0A1B0GTJ5 212 aa7.46□□□□□ -1.22
CKAP2-201ENST00000258607 LOC105371267A0A1B0GV96 52 aa7.46□□□□□ -1.22
CKAP2-201ENST00000258607 hADV38S2A0JD32 116 aa7.46□□□□□ -1.22
CKAP2-201ENST00000258607 C15orf65H3BRN8 121 aa7.46□□□□□ -1.22
CKAP2-201ENST00000258607 CDK2AP1O14519 115 aa7.46□□□□□ -1.22
CKAP2-201ENST00000258607 FOXH1O75593 365 aa7.46□□□□□ -1.22
CKAP2-201ENST00000258607 CEACAM4O75871 244 aa7.46□□□□□ -1.22
CKAP2-201ENST00000258607 YIF1AO95070 293 aa7.46□□□□□ -1.22
CKAP2-201ENST00000258607 SEC11BP0C7V7 166 aa7.46□□□□□ -1.22
CKAP2-201ENST00000258607 COL8A1P27658 744 aa7.46□□□□□ -1.22
CKAP2-201ENST00000258607 ZNF726P1Q15940 193 aa7.46□□□□□ -1.22
CKAP2-201ENST00000258607 C9orf152Q5JTZ5 239 aa7.46□□□□□ -1.22
CKAP2-201ENST00000258607 FBXL15Q9H469 300 aa7.46□□□□□ -1.22
CKAP2-201ENST00000258607 SERTAD4Q9NUC0 356 aa7.46□□□□□ -1.22
CKAP2-201ENST00000258607 SOD3P08294 240 aa7.46□□□□□ -1.22
CKAP2-201ENST00000258607 CABLES2Q9BTV7 478 aa7.46□□□□□ -1.22
CKAP2-201ENST00000258607 PLEKHA3Q9HB20 300 aa7.46□□□□□ -1.22
CKAP2-201ENST00000258607 OR51B2Q9Y5P1 312 aa7.46□□□□□ -1.22
CKAP2-201ENST00000258607 IGKV3-7A0A075B6H7 116 aa7.45□□□□□ -1.22
CKAP2-201ENST00000258607 IGHV3-49A0A0A0MS15 119 aa7.45□□□□□ -1.22
CKAP2-201ENST00000258607 RAB29O14966 203 aa7.45□□□□□ -1.22
CKAP2-201ENST00000258607 SAA1P0DJI8 122 aaPredicted RBP7.45□□□□□ -1.22
CKAP2-201ENST00000258607 CD1BP29016 333 aa7.45□□□□□ -1.22
CKAP2-201ENST00000258607 TDGF1P3P51864 188 aa7.45□□□□□ -1.22
CKAP2-201ENST00000258607 MBNL2Q5VZF2 373 aaKnown RBP7.45□□□□□ -1.22
CKAP2-201ENST00000258607 C1orf162Q8NEQ5 155 aaPredicted RBP7.45□□□□□ -1.22
CKAP2-201ENST00000258607 ELOVL1Q9BW60 279 aa7.45□□□□□ -1.22
CKAP2-201ENST00000258607 NGBQ9NPG2 151 aa7.45□□□□□ -1.22
CKAP2-201ENST00000258607 PARP11Q9NR21 331 aa7.45□□□□□ -1.22
CKAP2-201ENST00000258607 ZFP57Q9NU63 452 aa7.45□□□□□ -1.22
CKAP2-201ENST00000258607 TRAV5A0A0B4J249 113 aa7.45□□□□□ -1.22
CKAP2-201ENST00000258607 MGST1P10620 155 aaKnown RBP7.45□□□□□ -1.22
CKAP2-201ENST00000258607 CEACAM8P31997 349 aaPredicted RBP7.45□□□□□ -1.22
CKAP2-201ENST00000258607 CD200P41217 278 aa7.45□□□□□ -1.22
CKAP2-201ENST00000258607 SSBP2P81877 361 aaPredicted RBP7.45□□□□□ -1.22
CKAP2-201ENST00000258607 SRSF4Q08170 494 aaKnown RBP7.45□□□□□ -1.22
CKAP2-201ENST00000258607 IGFL3Q6UXB1 125 aa7.45□□□□□ -1.22
CKAP2-201ENST00000258607 IL34Q6ZMJ4 242 aa7.45□□□□□ -1.22
CKAP2-201ENST00000258607 TGIF2LXQ8IUE1 241 aa7.45□□□□□ -1.22
CKAP2-201ENST00000258607 GNPNAT1Q96EK6 184 aaPredicted RBP7.45□□□□□ -1.22
CKAP2-201ENST00000258607 GINS3Q9BRX5 216 aa7.45□□□□□ -1.22
CKAP2-201ENST00000258607 BIN3Q9NQY0 253 aa7.45□□□□□ -1.22
CKAP2-201ENST00000258607 IL19Q9UHD0 177 aa7.45□□□□□ -1.22
CKAP2-201ENST00000258607 RAI1Q7Z5J4 1906 aaPredicted RBP7.45□□□□□ -1.22
CKAP2-201ENST00000258607 SIAH2O43255 324 aa7.45□□□□□ -1.22
CKAP2-201ENST00000258607 NDUFB4O95168 129 aa7.45□□□□□ -1.22
CKAP2-201ENST00000258607 NPY1RP25929 384 aa7.45□□□□□ -1.22
CKAP2-201ENST00000258607 LOXL3P58215 753 aa7.45□□□□□ -1.22
CKAP2-201ENST00000258607 RAB4BP61018 213 aa7.45□□□□□ -1.22
CKAP2-201ENST00000258607 TCF23Q7RTU1 214 aa7.45□□□□□ -1.22
CKAP2-201ENST00000258607 WDR61Q9GZS3 305 aaKnown RBP7.45□□□□□ -1.22
CKAP2-201ENST00000258607 SEPSECSQ9HD40 501 aaKnown RBP7.45□□□□□ -1.22
CKAP2-201ENST00000258607 ARPC4-TTLL3A0A0A6YYG9 625 aa7.44□□□□□ -1.22
CKAP2-201ENST00000258607 RAB19A4D1S5 217 aa7.44□□□□□ -1.22
CKAP2-201ENST00000258607 GAPDHP04406 335 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms