RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 CD82P27701 267 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 OR10J1P30954 320 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 OPRK1P41145 380 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 RND2P52198 227 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 TAS2R45P59539 299 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 GNB1P62873 340 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 UBE2L3P68036 154 aaKnown RBP3.96□□□□□ -1.78
USP44-201ENST00000258499 TNFAIP6P98066 277 aaPredicted RBP3.96□□□□□ -1.78
USP44-201ENST00000258499 PLGLAQ15195 96 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 PRSS8Q16651 343 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 RPEL1Q2QD12 228 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 STUMQ69YW2 141 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 Q6ZT83 130 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 LINC01551Q86U37 167 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 ZNF664Q8N3J9 261 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 STPG3Q8N7X2 389 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 OR5AU1Q8NGC0 362 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 BLNKQ8WV28 456 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 TMEM170AQ8WVE7 144 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 CORO2AQ92828 525 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 PRDM13Q9H4Q3 707 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 CALYQ9NYX4 217 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 WDFY4Q6ZS81 3184 aa3.96□□□□□ -1.78
USP44-201ENST00000258499 IGHV3-21A0A0B4J1V1 117 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 SLC31A2O15432 143 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 MLNRO43193 412 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 COX7A2P2O60397 106 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 OR4A8P0C604 315 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 MYOD1P15172 320 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 IGFBP2P18065 325 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 ERHP84090 104 aaKnown RBP3.95□□□□□ -1.78
USP44-201ENST00000258499 TRIP6Q15654 476 aaKnown RBP3.95□□□□□ -1.78
USP44-201ENST00000258499 BHLHA15Q7RTS1 189 aaPredicted RBP3.95□□□□□ -1.78
USP44-201ENST00000258499 TGIF2LYQ8IUE0 185 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 Q8NFD4 153 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 OCC1Q8TAD7 63 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 TPPP3Q9BW30 176 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 MRPL18Q9H0U6 180 aaKnown RBP3.95□□□□□ -1.78
USP44-201ENST00000258499 C11orf1Q9H5F2 150 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 SLC45A2Q9UMX9 530 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 TRBV6-6A0A0A6YYG2 114 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 IQCF6A8MYZ5 107 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 HSBP1O75506 76 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 VENTXO95231 258 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 CA2P00918 260 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 IL6RP08887 468 aaPredicted RBP3.95□□□□□ -1.78
USP44-201ENST00000258499 ORM2P19652 201 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 GCHFRP30047 84 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 RAB7AP51149 207 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 UBE2G1P62253 170 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 SRSF6Q13247 344 aaKnown RBP3.95□□□□□ -1.78
USP44-201ENST00000258499 DAZAP2Q15038 168 aaPredicted RBP3.95□□□□□ -1.78
USP44-201ENST00000258499 HLA-DRB5Q30154 266 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 PRR31Q5SQ13 230 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 SPATA31B1PQ5VZV4 182 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 ZADH2Q8N4Q0 377 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 C9orf106Q8NAJ2 232 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 CCL17Q92583 94 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 NOL4LQ96MY1 436 aaPredicted RBP3.95□□□□□ -1.78
USP44-201ENST00000258499 SSBP3Q9BWW4 388 aaPredicted RBP3.95□□□□□ -1.78
USP44-201ENST00000258499 DYNLRB1Q9NP97 96 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 MBNL3Q9NUK0 354 aaKnown RBP3.95□□□□□ -1.78
USP44-201ENST00000258499 WDR83OSQ9Y284 106 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 OR51B2Q9Y5P1 312 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 ARFGEF3Q5TH69 2177 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 C15orf62A8K5M9 175 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.95□□□□□ -1.78
USP44-201ENST00000258499 DUTP33316 252 aaKnown RBP3.95□□□□□ -1.78
USP44-201ENST00000258499 CASP6P55212 293 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 TMEM183BQ1AE95 376 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 TRAT1Q6PIZ9 186 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 TREML4Q6UXN2 200 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 LURAP1LQ8IV03 231 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 MMD2Q8IY49 270 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 OR5B3Q8NH48 314 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 C22orf15Q8WYQ4 148 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 DAZAP1Q96EP5 407 aaKnown RBP3.95□□□□□ -1.78
USP44-201ENST00000258499 TMEM68Q96MH6 324 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 IER2Q9BTL4 223 aa3.95□□□□□ -1.78
USP44-201ENST00000258499 SEPSECSQ9HD40 501 aaKnown RBP3.95□□□□□ -1.78
USP44-201ENST00000258499 CHD3Q12873 2000 aaKnown RBP3.95□□□□□ -1.78
USP44-201ENST00000258499 COL6A6A6NMZ7 2263 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 IGHV3-72A0A0B4J1Y9 119 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 MPDU1O75352 247 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 ADMP35318 185 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 TNFSF10P50591 281 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 HSPE1P61604 102 aaKnown RBP3.94□□□□□ -1.78
USP44-201ENST00000258499 KRTAP27-1Q3LI81 207 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 CENPWQ5EE01 88 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 MIR17HGQ75NE6 70 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 ZNF295-AS1Q8N0V1 137 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 ATOH7Q8N100 152 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 ZNF114Q8NC26 417 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 HARBI1Q96MB7 349 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 TECRQ9NZ01 308 aaKnown RBP3.94□□□□□ -1.78
USP44-201ENST00000258499 IGHV2OR16-5A0A0B4J2B6 119 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 NKX6-3A6NJ46 265 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 VSTM5A8MXK1 200 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 SERF1AO75920 110 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 MFAP2P55001 183 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms