RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 HSPB7Q9UBY9 170 aa13.33□□□□□ -0.27
SLC6A8-201ENST00000253122 IL18BPO95998 194 aa13.33□□□□□ -0.28
SLC6A8-201ENST00000253122 NPY1RP25929 384 aa13.33□□□□□ -0.28
SLC6A8-201ENST00000253122 RELQ04864 619 aaPredicted RBP13.33□□□□□ -0.28
SLC6A8-201ENST00000253122 KRTCAP3Q53RY4 240 aa13.33□□□□□ -0.28
SLC6A8-201ENST00000253122 LCN12Q6JVE5 192 aa13.33□□□□□ -0.28
SLC6A8-201ENST00000253122 CORO2AQ92828 525 aa13.33□□□□□ -0.28
SLC6A8-201ENST00000253122 MS4A5Q9H3V2 200 aa13.33□□□□□ -0.28
SLC6A8-201ENST00000253122 IL19Q9UHD0 177 aa13.33□□□□□ -0.28
SLC6A8-201ENST00000253122 CEP192Q8TEP8 1941 aa13.33□□□□□ -0.28
SLC6A8-201ENST00000253122 IBA57Q5T440 356 aaKnown RBP13.33□□□□□ -0.28
SLC6A8-201ENST00000253122 RBMXL3Q8N7X1 1067 aaKnown RBP13.33□□□□□ -0.28
SLC6A8-201ENST00000253122 SLC25A40Q8TBP6 338 aa13.33□□□□□ -0.28
SLC6A8-201ENST00000253122 ZFP30Q9Y2G7 519 aa13.33□□□□□ -0.28
SLC6A8-201ENST00000253122 VPS13AQ96RL7 3174 aa13.32□□□□□ -0.28
SLC6A8-201ENST00000253122 PRB4P10163 310 aaPredicted RBP13.32□□□□□ -0.28
SLC6A8-201ENST00000253122 OR1C1Q15619 314 aa13.32□□□□□ -0.28
SLC6A8-201ENST00000253122 DCTN5Q9BTE1 182 aa13.32□□□□□ -0.28
SLC6A8-201ENST00000253122 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.32□□□□□ -0.282e-16■■□□□ 14.4
SLC6A8-201ENST00000253122 FOXL2NBQ6ZUU3 175 aa13.32□□□□□ -0.28
SLC6A8-201ENST00000253122 MT-ND6P03923 174 aa13.32□□□□□ -0.28
SLC6A8-201ENST00000253122 CELA3AP09093 270 aa13.32□□□□□ -0.28
SLC6A8-201ENST00000253122 SMIM21Q3B7S5 101 aa13.32□□□□□ -0.28
SLC6A8-201ENST00000253122 SGK494Q96LW2 274 aa13.32□□□□□ -0.28
SLC6A8-201ENST00000253122 SH3BGRL2Q9UJC5 107 aa13.32□□□□□ -0.28
SLC6A8-201ENST00000253122 MPDU1O75352 247 aa13.31□□□□□ -0.28
SLC6A8-201ENST00000253122 CSN3P07498 182 aa13.31□□□□□ -0.28
SLC6A8-201ENST00000253122 UBE2L3P68036 154 aaKnown RBP13.31□□□□□ -0.28
SLC6A8-201ENST00000253122 LYG1Q8N1E2 194 aa13.31□□□□□ -0.28
SLC6A8-201ENST00000253122 TXNDC17Q9BRA2 123 aa13.31□□□□□ -0.28
SLC6A8-201ENST00000253122 HES7Q9BYE0 225 aa13.31□□□□□ -0.28
SLC6A8-201ENST00000253122 ARFGEF3Q5TH69 2177 aa13.31□□□□□ -0.28
SLC6A8-201ENST00000253122 F2Z2F3 143 aa13.31□□□□□ -0.28
SLC6A8-201ENST00000253122 TYMSP04818 313 aa13.31□□□□□ -0.28
SLC6A8-201ENST00000253122 SPSB4Q96A44 273 aa13.31□□□□□ -0.28
SLC6A8-201ENST00000253122 WDR54Q9H977 334 aa13.31□□□□□ -0.28
SLC6A8-201ENST00000253122 TMEM167BQ9NRX6 74 aa13.31□□□□□ -0.28
SLC6A8-201ENST00000253122 CA1P00915 261 aaPredicted RBP13.31□□□□□ -0.28
SLC6A8-201ENST00000253122 Q6ZVH6 145 aa13.31□□□□□ -0.28
SLC6A8-201ENST00000253122 STPG3Q8N7X2 389 aa13.31□□□□□ -0.28
SLC6A8-201ENST00000253122 PKIBQ9C010 78 aa13.31□□□□□ -0.28
SLC6A8-201ENST00000253122 ASCL3Q9NQ33 180 aa13.31□□□□□ -0.28
SLC6A8-201ENST00000253122 Q6ZS49 121 aa13.3□□□□□ -0.28
SLC6A8-201ENST00000253122 FAM173AQ9BQD7 235 aa13.3□□□□□ -0.28
SLC6A8-201ENST00000253122 C20orf144Q9BQM9 153 aa13.3□□□□□ -0.28
SLC6A8-201ENST00000253122 TECTAO75443 2155 aa13.3□□□□□ -0.28
SLC6A8-201ENST00000253122 BDP1A6H8Y1 2624 aa13.3□□□□□ -0.28
SLC6A8-201ENST00000253122 NPPCP23582 126 aa13.3□□□□□ -0.28
SLC6A8-201ENST00000253122 IMMP1LQ96LU5 166 aa13.3□□□□□ -0.28
SLC6A8-201ENST00000253122 CHEK1O14757 476 aa13.3□□□□□ -0.28
SLC6A8-201ENST00000253122 GATA2P23769 480 aaPredicted RBP13.3□□□□□ -0.28
SLC6A8-201ENST00000253122 ACSF3Q4G176 576 aaPredicted RBP13.3□□□□□ -0.28
SLC6A8-201ENST00000253122 OR4A47Q6IF82 309 aa13.3□□□□□ -0.28
SLC6A8-201ENST00000253122 OR2T6Q8NHC8 308 aa13.3□□□□□ -0.28
SLC6A8-201ENST00000253122 LEAP2Q969E1 77 aa13.3□□□□□ -0.28
SLC6A8-201ENST00000253122 ALKBH7Q9BT30 221 aaPredicted RBP13.3□□□□□ -0.28
SLC6A8-201ENST00000253122 FBXL7Q9UJT9 491 aa13.3□□□□□ -0.28
SLC6A8-201ENST00000253122 WDR83OSQ9Y284 106 aa13.3□□□□□ -0.28
SLC6A8-201ENST00000253122 HLA-DQA1P01909 254 aa13.29□□□□□ -0.28
SLC6A8-201ENST00000253122 IL6RP08887 468 aaPredicted RBP13.29□□□□□ -0.28
SLC6A8-201ENST00000253122 SPATA31B1PQ5VZV4 182 aa13.29□□□□□ -0.28
SLC6A8-201ENST00000253122 BLNKQ8WV28 456 aa13.29□□□□□ -0.28
SLC6A8-201ENST00000253122 LRRC29Q8WV35 223 aa13.29□□□□□ -0.28
SLC6A8-201ENST00000253122 KIR2DL5BA0A0G2JN68 375 aa13.29□□□□□ -0.28
SLC6A8-201ENST00000253122 KIR2DL5BA0A0G2JPC4 375 aa13.29□□□□□ -0.28
SLC6A8-201ENST00000253122 ZNF137PP52743 207 aa13.29□□□□□ -0.28
SLC6A8-201ENST00000253122 MRPL14Q6P1L8 145 aaKnown RBP13.29□□□□□ -0.28
SLC6A8-201ENST00000253122 KIR2DL5AQ8N109 375 aa13.29□□□□□ -0.28
SLC6A8-201ENST00000253122 TMEM105Q8N8V8 129 aa13.29□□□□□ -0.28
SLC6A8-201ENST00000253122 FREM2Q5SZK8 3169 aa13.29□□□□□ -0.28
SLC6A8-201ENST00000253122 ATRXP46100 2492 aa13.29□□□□□ -0.28
SLC6A8-201ENST00000253122 TRIOO75962 3097 aa13.29□□□□□ -0.28
SLC6A8-201ENST00000253122 SMIM15Q7Z3B0 74 aa13.29□□□□□ -0.28
SLC6A8-201ENST00000253122 EAF1Q96JC9 268 aaPredicted RBP13.29□□□□□ -0.28
SLC6A8-201ENST00000253122 STRADBQ9C0K7 418 aa13.29□□□□□ -0.28
SLC6A8-201ENST00000253122 ARRDC1-AS1Q9H2J1 176 aa13.29□□□□□ -0.28
SLC6A8-201ENST00000253122 ACACAQ13085 2346 aa13.29□□□□□ -0.28
SLC6A8-201ENST00000253122 COX7A2P2O60397 106 aa13.28□□□□□ -0.28
SLC6A8-201ENST00000253122 GPR6P46095 362 aaPredicted RBP13.28□□□□□ -0.28
SLC6A8-201ENST00000253122 RELBQ01201 579 aa13.28□□□□□ -0.28
SLC6A8-201ENST00000253122 C6orf15Q6UXA7 325 aaPredicted RBP13.28□□□□□ -0.28
SLC6A8-201ENST00000253122 GGNQ86UU5 652 aa13.28□□□□□ -0.28
SLC6A8-201ENST00000253122 C1orf174Q8IYL3 243 aa13.28□□□□□ -0.28
SLC6A8-201ENST00000253122 OR2Z1Q8NG97 314 aa13.28□□□□□ -0.28
SLC6A8-201ENST00000253122 TCF19Q9Y242 345 aa13.28□□□□□ -0.28
SLC6A8-201ENST00000253122 LOXL2Q9Y4K0 774 aa13.28□□□□□ -0.28
SLC6A8-201ENST00000253122 SRSF7Q16629 238 aaKnown RBP eCLIP13.28□□□□□ -0.282e-15■□□□□ 9.6
SLC6A8-201ENST00000253122 ZNF497Q6ZNH5 498 aa13.28□□□□□ -0.28
SLC6A8-201ENST00000253122 ZNF355PQ9NSJ1 428 aa13.28□□□□□ -0.28
SLC6A8-201ENST00000253122 CELSR3Q9NYQ7 3312 aa13.28□□□□□ -0.28
SLC6A8-201ENST00000253122 TMEM131Q92545 1883 aa13.28□□□□□ -0.28
SLC6A8-201ENST00000253122 PDLIM4P50479 330 aa13.28□□□□□ -0.28
SLC6A8-201ENST00000253122 FOXA3P55318 350 aaPredicted RBP13.28□□□□□ -0.28
SLC6A8-201ENST00000253122 COX19Q49B96 90 aa13.28□□□□□ -0.28
SLC6A8-201ENST00000253122 POM121L2Q96KW2 1035 aa13.28□□□□□ -0.28
SLC6A8-201ENST00000253122 GPX1P07203 203 aa13.27□□□□□ -0.28
SLC6A8-201ENST00000253122 MIR17HGQ75NE6 70 aa13.27□□□□□ -0.28
SLC6A8-201ENST00000253122 OR8B2Q96RD0 313 aa13.27□□□□□ -0.28
SLC6A8-201ENST00000253122 SEPSECSQ9HD40 501 aaKnown RBP13.27□□□□□ -0.28
SLC6A8-201ENST00000253122 MED13Q9UHV7 2174 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms