RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 ZNF320A2RRD8 509 aa14.08□□□□□ -0.16
FOXA1-201ENST00000250448 A8MXE2 369 aa14.08□□□□□ -0.16
FOXA1-201ENST00000250448 IFNL4K9M1U5 179 aa14.08□□□□□ -0.16
FOXA1-201ENST00000250448 M0R1B8 84 aa14.08□□□□□ -0.16
FOXA1-201ENST00000250448 ATP5G3P48201 142 aa14.08□□□□□ -0.16
FOXA1-201ENST00000250448 FABP6P51161 128 aa14.08□□□□□ -0.16
FOXA1-201ENST00000250448 UBE2G2P60604 165 aa14.08□□□□□ -0.16
FOXA1-201ENST00000250448 BTF3L4Q96K17 158 aa14.08□□□□□ -0.16
FOXA1-201ENST00000250448 AURKAIP1Q9NWT8 199 aaPredicted RBP14.08□□□□□ -0.16
FOXA1-201ENST00000250448 TRAPPC1Q9Y5R8 145 aa14.08□□□□□ -0.16
FOXA1-201ENST00000250448 TRGV8A0A0C4DH27 118 aa14.07□□□□□ -0.16
FOXA1-201ENST00000250448 HBZP02008 142 aa14.07□□□□□ -0.16
FOXA1-201ENST00000250448 PSG7Q13046 419 aa14.07□□□□□ -0.16
FOXA1-201ENST00000250448 Q8N7P7 452 aa14.07□□□□□ -0.16
FOXA1-201ENST00000250448 CLUHP3Q96NS8 147 aa14.07□□□□□ -0.16
FOXA1-201ENST00000250448 J3QW42 95 aa14.07□□□□□ -0.16
FOXA1-201ENST00000250448 KLF14Q8TD94 323 aaPredicted RBP14.07□□□□□ -0.16
FOXA1-201ENST00000250448 NINJ1Q92982 152 aa14.07□□□□□ -0.16
FOXA1-201ENST00000250448 KCNIP2Q9NS61 270 aa14.07□□□□□ -0.16
FOXA1-201ENST00000250448 FKBP11Q9NYL4 201 aa14.07□□□□□ -0.16
FOXA1-201ENST00000250448 ZNF835Q9Y2P0 537 aa14.07□□□□□ -0.16
FOXA1-201ENST00000250448 IGHV2OR16-5A0A0B4J2B6 119 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 OOEPA6NGQ2 149 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 C15orf62A8K5M9 175 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 SOX15O60248 233 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 GRPP07492 148 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 CST9LP1Q5W188 147 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 TEX38Q6PEX7 206 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 VHLLQ6RSH7 139 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 TCTEX1D1Q8N7M0 179 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 IMMP2LQ96T52 175 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 DERL1Q9BUN8 251 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 WDR83OSQ9Y284 106 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 TRAV38-1A0A0B4J264 116 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 F6UZH7 168 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 NDUFB4O95168 129 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 HOXA4Q00056 320 aaPredicted RBP14.06□□□□□ -0.16
FOXA1-201ENST00000250448 GCSAMLQ5JQS6 135 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 PXMP4Q9Y6I8 212 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 SCGB1D1O95968 90 aa14.05□□□□□ -0.16
FOXA1-201ENST00000250448 TMEM249Q2WGJ8 235 aa14.05□□□□□ -0.16
FOXA1-201ENST00000250448 SLC35E4Q6ICL7 350 aa14.05□□□□□ -0.16
FOXA1-201ENST00000250448 HSBP1L1C9JCN9 74 aa14.05□□□□□ -0.16
FOXA1-201ENST00000250448 IGLV1-44P01699 117 aa14.05□□□□□ -0.16
FOXA1-201ENST00000250448 HNF1AP20823 631 aa14.05□□□□□ -0.16
FOXA1-201ENST00000250448 KLRB1Q12918 225 aa14.05□□□□□ -0.16
FOXA1-201ENST00000250448 ZNF114Q8NC26 417 aa14.05□□□□□ -0.16
FOXA1-201ENST00000250448 RAB1CQ92928 201 aa14.05□□□□□ -0.16
FOXA1-201ENST00000250448 HES4Q9HCC6 221 aa14.05□□□□□ -0.16
FOXA1-201ENST00000250448 RNF24Q9Y225 148 aa14.05□□□□□ -0.16
FOXA1-201ENST00000250448 A0A1B0GUS0 222 aa14.05□□□□□ -0.16
FOXA1-201ENST00000250448 AESQ08117 197 aa14.05□□□□□ -0.16
FOXA1-201ENST00000250448 TMEM256Q8N2U0 113 aa14.05□□□□□ -0.16
FOXA1-201ENST00000250448 ZNF25P17030 456 aaPredicted RBP14.04□□□□□ -0.16
FOXA1-201ENST00000250448 FOXL1Q12952 345 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 MSMPQ1L6U9 139 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 MRGPRDQ8TDS7 321 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 POLR3KQ9Y2Y1 108 aaPredicted RBP14.04□□□□□ -0.16
FOXA1-201ENST00000250448 KIR2DL5BA0A0G2JN68 375 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 KIR2DL5BA0A0G2JPC4 375 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 MDFIC2A0A1B0GVS7 189 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 PGPEP1LA6NFU8 196 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 LINC00473A8K010 186 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 CD1BP29016 333 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 EDDM3BP56851 147 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 TIMM23BQ5SRD1 257 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 KIR2DL5AQ8N109 375 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 COQ2Q96H96 371 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 QTRT1Q9BXR0 403 aaKnown RBP14.04□□□□□ -0.16
FOXA1-201ENST00000250448 SNHG12Q9BXW3 62 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 MSL2Q9HCI7 577 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 CBLN4Q9NTU7 201 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 ELOVL5Q9NYP7 299 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 NAGKQ9UJ70 344 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 A0A1W2PPV4 95 aa14.03□□□□□ -0.16
FOXA1-201ENST00000250448 TMEM210A6NLX4 147 aa14.03□□□□□ -0.16
FOXA1-201ENST00000250448 WNT9BO14905 357 aa14.03□□□□□ -0.16
FOXA1-201ENST00000250448 ERVFC1-1P60608 527 aa14.03□□□□□ -0.16
FOXA1-201ENST00000250448 C1orf194Q5T5A4 169 aa14.03□□□□□ -0.16
FOXA1-201ENST00000250448 LRP11Q86VZ4 500 aa14.03□□□□□ -0.16
FOXA1-201ENST00000250448 SGMS2Q8NHU3 365 aa14.03□□□□□ -0.16
FOXA1-201ENST00000250448 SFRP2Q96HF1 295 aa14.03□□□□□ -0.16
FOXA1-201ENST00000250448 GOLT1BQ9Y3E0 138 aa14.03□□□□□ -0.16
FOXA1-201ENST00000250448 GCH1P30793 250 aa14.03□□□□□ -0.16
FOXA1-201ENST00000250448 RBPJQ06330 500 aa14.03□□□□□ -0.16
FOXA1-201ENST00000250448 RPH3ALQ9UNE2 315 aa14.03□□□□□ -0.16
FOXA1-201ENST00000250448 IQCF6A8MYZ5 107 aa14.02□□□□□ -0.16
FOXA1-201ENST00000250448 RBFOX2O43251 390 aaKnown RBP eCLIP14.02□□□□□ -0.161e-6■■■■□ 23
FOXA1-201ENST00000250448 GABRA2P47869 451 aa14.02□□□□□ -0.16
FOXA1-201ENST00000250448 LINC00205P59089 165 aa14.02□□□□□ -0.16
FOXA1-201ENST00000250448 DUSP13Q9UII6 198 aa14.02□□□□□ -0.16
FOXA1-201ENST00000250448 IGHV3-43A0A0B4J1X8 118 aa14.02□□□□□ -0.17
FOXA1-201ENST00000250448 IGHV3-43DP0DP04 118 aa14.02□□□□□ -0.17
FOXA1-201ENST00000250448 R3HDM4Q96D70 268 aa14.02□□□□□ -0.17
FOXA1-201ENST00000250448 MS4A10Q96PG2 267 aa14.02□□□□□ -0.17
FOXA1-201ENST00000250448 HSD17B10Q99714 261 aaKnown RBP14.02□□□□□ -0.17
FOXA1-201ENST00000250448 OBP2BQ9NPH6 170 aa14.02□□□□□ -0.17
FOXA1-201ENST00000250448 NUPR1O60356 82 aa14.01□□□□□ -0.17
FOXA1-201ENST00000250448 NPSP0C0P6 89 aa14.01□□□□□ -0.17
FOXA1-201ENST00000250448 OR9G9P0C7N8 305 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms