RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 SERF1AO75920 110 aa7.82□□□□□ -1.16
SRSF6-201ENST00000244020 IGKV1-39P01597 117 aa7.82□□□□□ -1.16
SRSF6-201ENST00000244020 IGKV1D-39P04432 117 aa7.82□□□□□ -1.16
SRSF6-201ENST00000244020 GPR12P47775 334 aa7.82□□□□□ -1.16
SRSF6-201ENST00000244020 PCSK4Q6UW60 755 aa7.82□□□□□ -1.16
SRSF6-201ENST00000244020 LOXL4Q96JB6 756 aa7.82□□□□□ -1.16
SRSF6-201ENST00000244020 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.82□□□□□ -1.16
SRSF6-201ENST00000244020 M0R296 226 aa7.82□□□□□ -1.16
SRSF6-201ENST00000244020 LRP4O75096 1905 aa7.82□□□□□ -1.16
SRSF6-201ENST00000244020 SCGB1A1P11684 91 aa7.82□□□□□ -1.16
SRSF6-201ENST00000244020 GUCD1Q96NT3 240 aa7.82□□□□□ -1.16
SRSF6-201ENST00000244020 NPCDR1Q9BY65 106 aa7.82□□□□□ -1.16
SRSF6-201ENST00000244020 GPR35Q9HC97 309 aa7.82□□□□□ -1.16
SRSF6-201ENST00000244020 DUSP13Q9UII6 198 aa7.82□□□□□ -1.16
SRSF6-201ENST00000244020 A0A1W2PR77 199 aa7.82□□□□□ -1.16
SRSF6-201ENST00000244020 DEFB108AA8MXU0 73 aa7.82□□□□□ -1.16
SRSF6-201ENST00000244020 RHOBP62745 196 aa7.82□□□□□ -1.16
SRSF6-201ENST00000244020 UBE2L3P68036 154 aaKnown RBP7.82□□□□□ -1.16
SRSF6-201ENST00000244020 GAGE1Q13065 139 aa7.82□□□□□ -1.16
SRSF6-201ENST00000244020 WFDC8Q8IUA0 241 aa7.82□□□□□ -1.16
SRSF6-201ENST00000244020 TMEM186Q96B77 213 aa7.82□□□□□ -1.16
SRSF6-201ENST00000244020 FLYWCH2Q96CP2 140 aaKnown RBP7.82□□□□□ -1.16
SRSF6-201ENST00000244020 SPTAN1Q13813 2472 aaKnown RBP7.82□□□□□ -1.16
SRSF6-201ENST00000244020 IGLV3-12A0A075B6K2 115 aa7.81□□□□□ -1.16
SRSF6-201ENST00000244020 EPOPA6NHQ4 379 aa7.81□□□□□ -1.16
SRSF6-201ENST00000244020 ADH4P08319 380 aa7.81□□□□□ -1.16
SRSF6-201ENST00000244020 STAG3L3P0CL85 134 aa7.81□□□□□ -1.16
SRSF6-201ENST00000244020 NXPH1P58417 271 aa7.81□□□□□ -1.16
SRSF6-201ENST00000244020 SRSF7Q16629 238 aaKnown RBP eCLIP7.81□□□□□ -1.163e-19■□□□□ 10.9
SRSF6-201ENST00000244020 RPS19BP1Q86WX3 136 aaKnown RBP7.81□□□□□ -1.16
SRSF6-201ENST00000244020 HSD17B10Q99714 261 aaKnown RBP7.81□□□□□ -1.16
SRSF6-201ENST00000244020 ZNF355PQ9NSJ1 428 aa7.81□□□□□ -1.16
SRSF6-201ENST00000244020 CLEC5AQ9NY25 188 aa7.81□□□□□ -1.16
SRSF6-201ENST00000244020 MYO15AQ9UKN7 3530 aa7.81□□□□□ -1.16
SRSF6-201ENST00000244020 ZG16O60844 167 aa7.81□□□□□ -1.16
SRSF6-201ENST00000244020 SNCGO76070 127 aa7.81□□□□□ -1.16
SRSF6-201ENST00000244020 CDKN1AP38936 164 aa7.81□□□□□ -1.16
SRSF6-201ENST00000244020 Q6ZWC4 215 aa7.81□□□□□ -1.16
SRSF6-201ENST00000244020 QTRT1Q9BXR0 403 aaKnown RBP7.81□□□□□ -1.16
SRSF6-201ENST00000244020 DLL3Q9NYJ7 618 aa7.81□□□□□ -1.16
SRSF6-201ENST00000244020 A0A1B0GW15 77 aa7.81□□□□□ -1.16
SRSF6-201ENST00000244020 ODAMA1E959 279 aa7.81□□□□□ -1.16
SRSF6-201ENST00000244020 MT-CO3P00414 261 aa7.81□□□□□ -1.16
SRSF6-201ENST00000244020 GNB1P62873 340 aa7.81□□□□□ -1.16
SRSF6-201ENST00000244020 FOXL1Q12952 345 aa7.81□□□□□ -1.16
SRSF6-201ENST00000244020 OR10D3Q8NH80 312 aa7.81□□□□□ -1.16
SRSF6-201ENST00000244020 ZNF502Q8TBZ5 544 aa7.81□□□□□ -1.16
SRSF6-201ENST00000244020 HIST1H4GQ99525 98 aa7.81□□□□□ -1.16
SRSF6-201ENST00000244020 BEX4Q9NWD9 120 aaPredicted RBP7.81□□□□□ -1.16
SRSF6-201ENST00000244020 ELOVL5Q9NYP7 299 aa7.81□□□□□ -1.16
SRSF6-201ENST00000244020 SLC17A3O00476 420 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 SLC25A17O43808 307 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 IGLV3-19P01714 112 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 UMODP07911 640 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 COL8A1P27658 744 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 ARR3P36575 388 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 RPL15P61313 204 aaKnown RBP7.8□□□□□ -1.16
SRSF6-201ENST00000244020 RPL11P62913 178 aaKnown RBP7.8□□□□□ -1.16
SRSF6-201ENST00000244020 KLRB1Q12918 225 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 CENPVQ7Z7K6 275 aaPredicted RBP7.8□□□□□ -1.16
SRSF6-201ENST00000244020 VASH2Q86V25 355 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 DRAM1Q8N682 238 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 DEFB108BQ8NET1 73 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 ZDHHC16Q969W1 377 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 SGK494Q96LW2 274 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 C20orf144Q9BQM9 153 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 SSBP3Q9BWW4 388 aaPredicted RBP7.8□□□□□ -1.16
SRSF6-201ENST00000244020 COMMD5Q9GZQ3 224 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 CLEC1BQ9P126 229 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 R4GN57 208 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 HLA-DRB1P01911 266 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 CFIP05156 583 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 NTF4P34130 210 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 ARG2P78540 354 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 UBE2V1Q13404 147 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 GCSAMLQ5JQS6 135 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 WIPI1Q5MNZ9 446 aaPredicted RBP7.8□□□□□ -1.16
SRSF6-201ENST00000244020 LYSMD4Q5XG99 296 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 WFDC12Q8WWY7 111 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 APOBEC3DQ96AK3 386 aaPredicted RBP7.8□□□□□ -1.16
SRSF6-201ENST00000244020 FER1L5A0AVI2 2057 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 FAM90A26D6RGX4 464 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 COX19Q49B96 90 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 ZNF585BQ52M93 769 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 SLC23A3Q6PIS1 610 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 TMEM14EPQ6UXP3 125 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 TMEM136Q6ZRR5 245 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 SAXO1Q8IYX7 474 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 SLC25A45Q8N413 288 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 SAP30LQ9HAJ7 183 aa7.8□□□□□ -1.16
SRSF6-201ENST00000244020 LAMA1P25391 3075 aa7.79□□□□□ -1.16
SRSF6-201ENST00000244020 TRAV24A0A0B4J272 114 aa7.79□□□□□ -1.16
SRSF6-201ENST00000244020 FCGR3BO75015 233 aa7.79□□□□□ -1.16
SRSF6-201ENST00000244020 GNG3P63215 75 aa7.79□□□□□ -1.16
SRSF6-201ENST00000244020 OR2K2Q8NGT1 345 aa7.79□□□□□ -1.16
SRSF6-201ENST00000244020 OR1L1Q8NH94 360 aa7.79□□□□□ -1.16
SRSF6-201ENST00000244020 RNF138Q8WVD3 245 aa7.79□□□□□ -1.16
SRSF6-201ENST00000244020 C1QTNF5Q9BXJ0 243 aa7.79□□□□□ -1.16
SRSF6-201ENST00000244020 PRDM14Q9GZV8 571 aa7.79□□□□□ -1.16
SRSF6-201ENST00000244020 JKAMPQ9P055 326 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms