RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 STAG3L3P0CL85 134 aa12.83□□□□□ -0.35
CTSD-201ENST00000236671 GCH1P30793 250 aa12.83□□□□□ -0.35
CTSD-201ENST00000236671 CNN1P51911 297 aaKnown RBP12.83□□□□□ -0.35
CTSD-201ENST00000236671 RELBQ01201 579 aa12.83□□□□□ -0.35
CTSD-201ENST00000236671 RPL39P5Q59GN2 51 aa12.83□□□□□ -0.35
CTSD-201ENST00000236671 ABHD17AQ96GS6 310 aa12.83□□□□□ -0.35
CTSD-201ENST00000236671 FAM234AQ9H0X4 552 aa12.83□□□□□ -0.35
CTSD-201ENST00000236671 HEYLQ9NQ87 328 aaPredicted RBP12.83□□□□□ -0.35
CTSD-201ENST00000236671 PXMP4Q9Y6I8 212 aa12.83□□□□□ -0.35
CTSD-201ENST00000236671 TRAV3A0A0B4J244 114 aa12.83□□□□□ -0.36
CTSD-201ENST00000236671 A0A1B0GV90 55 aa12.83□□□□□ -0.36
CTSD-201ENST00000236671 RBFOX2O43251 390 aaKnown RBP eCLIP12.83□□□□□ -0.362e-6■■□□□ 14.4
CTSD-201ENST00000236671 MIC13Q5XKP0 118 aa12.83□□□□□ -0.36
CTSD-201ENST00000236671 FAM216AQ8WUB2 273 aa12.83□□□□□ -0.36
CTSD-201ENST00000236671 TMEM18Q96B42 140 aa12.83□□□□□ -0.36
CTSD-201ENST00000236671 IFI27L2Q9H2X8 130 aa12.83□□□□□ -0.36
CTSD-201ENST00000236671 PRR14LQ5THK1 2151 aa12.83□□□□□ -0.36
CTSD-201ENST00000236671 IGHV1-18A0A0C4DH31 117 aa12.82□□□□□ -0.36
CTSD-201ENST00000236671 A0A0U1RQK1 487 aa12.82□□□□□ -0.36
CTSD-201ENST00000236671 ZNF320A2RRD8 509 aa12.82□□□□□ -0.36
CTSD-201ENST00000236671 SRRM5B3KS81 715 aa12.82□□□□□ -0.36
CTSD-201ENST00000236671 YPEL1O60688 119 aa12.82□□□□□ -0.36
CTSD-201ENST00000236671 ZNF134P52741 427 aa12.82□□□□□ -0.36
CTSD-201ENST00000236671 LOXL3P58215 753 aa12.82□□□□□ -0.36
CTSD-201ENST00000236671 FOXL1Q12952 345 aa12.82□□□□□ -0.36
CTSD-201ENST00000236671 CR1LQ2VPA4 569 aa12.82□□□□□ -0.36
CTSD-201ENST00000236671 C1orf159Q96HA4 380 aa12.82□□□□□ -0.36
CTSD-201ENST00000236671 SFRP2Q96HF1 295 aa12.82□□□□□ -0.36
CTSD-201ENST00000236671 NOL4LQ96MY1 436 aaPredicted RBP12.82□□□□□ -0.36
CTSD-201ENST00000236671 YPEL2Q96QA6 119 aa12.82□□□□□ -0.36
CTSD-201ENST00000236671 DUSP13Q9UII6 198 aa12.82□□□□□ -0.36
CTSD-201ENST00000236671 UCNP55089 124 aa12.82□□□□□ -0.36
CTSD-201ENST00000236671 ERVK-16P61578 105 aa12.82□□□□□ -0.36
CTSD-201ENST00000236671 ABHD12Q8N2K0 398 aa12.82□□□□□ -0.36
CTSD-201ENST00000236671 GBGT1Q8N5D6 347 aa12.82□□□□□ -0.36
CTSD-201ENST00000236671 SDSLQ96GA7 329 aa12.82□□□□□ -0.36
CTSD-201ENST00000236671 TXNDC17Q9BRA2 123 aa12.82□□□□□ -0.36
CTSD-201ENST00000236671 TMEM140Q9NV12 185 aa12.82□□□□□ -0.36
CTSD-201ENST00000236671 TP53TG5Q9Y2B4 290 aa12.82□□□□□ -0.36
CTSD-201ENST00000236671 LSM4Q9Y4Z0 139 aaKnown RBP12.82□□□□□ -0.36
CTSD-201ENST00000236671 HCFC1P51610 2035 aa12.81□□□□□ -0.36
CTSD-201ENST00000236671 FAM208BQ5VWN6 2430 aa12.81□□□□□ -0.36
CTSD-201ENST00000236671 ZNF705GA8MUZ8 300 aaPredicted RBP12.81□□□□□ -0.36
CTSD-201ENST00000236671 F2RL2O00254 374 aa12.81□□□□□ -0.36
CTSD-201ENST00000236671 CXorf1O96002 111 aa12.81□□□□□ -0.36
CTSD-201ENST00000236671 OR2Z1Q8NG97 314 aa12.81□□□□□ -0.36
CTSD-201ENST00000236671 BTF3L4Q96K17 158 aa12.81□□□□□ -0.36
CTSD-201ENST00000236671 ELOVL5Q9NYP7 299 aa12.81□□□□□ -0.36
CTSD-201ENST00000236671 TRAPPC1Q9Y5R8 145 aa12.81□□□□□ -0.36
CTSD-201ENST00000236671 SCO2A0A1W2PP80 73 aa12.8□□□□□ -0.36
CTSD-201ENST00000236671 AQP7O14520 342 aa12.8□□□□□ -0.36
CTSD-201ENST00000236671 MGST3O14880 152 aa12.8□□□□□ -0.36
CTSD-201ENST00000236671 IGHV3-13P01766 116 aa12.8□□□□□ -0.36
CTSD-201ENST00000236671 IGHV3-7P01780 117 aa12.8□□□□□ -0.36
CTSD-201ENST00000236671 CCKARP32238 428 aa12.8□□□□□ -0.36
CTSD-201ENST00000236671 SSX2Q16385 188 aa12.8□□□□□ -0.36
CTSD-201ENST00000236671 MSMPQ1L6U9 139 aa12.8□□□□□ -0.36
CTSD-201ENST00000236671 SGMS2Q8NHU3 365 aa12.8□□□□□ -0.36
CTSD-201ENST00000236671 DDB2Q92466 427 aa12.8□□□□□ -0.36
CTSD-201ENST00000236671 TMEM204Q9BSN7 226 aa12.8□□□□□ -0.36
CTSD-201ENST00000236671 TCF19Q9Y242 345 aa12.8□□□□□ -0.36
CTSD-201ENST00000236671 TRGV8A0A0C4DH27 118 aa12.8□□□□□ -0.36
CTSD-201ENST00000236671 MDFIC2A0A1B0GVS7 189 aa12.8□□□□□ -0.36
CTSD-201ENST00000236671 SLC31A2O15432 143 aa12.8□□□□□ -0.36
CTSD-201ENST00000236671 MZT1Q08AG7 82 aa12.8□□□□□ -0.36
CTSD-201ENST00000236671 UTF1Q5T230 341 aa12.8□□□□□ -0.36
CTSD-201ENST00000236671 C1orf229Q6ZS94 237 aaPredicted RBP12.8□□□□□ -0.36
CTSD-201ENST00000236671 MRPL41Q8IXM3 137 aaKnown RBP12.8□□□□□ -0.36
CTSD-201ENST00000236671 S1PR3Q99500 378 aa12.8□□□□□ -0.36
CTSD-201ENST00000236671 YTHDF2Q9Y5A9 579 aaKnown RBP12.8□□□□□ -0.36
CTSD-201ENST00000236671 TET2Q6N021 2002 aaPredicted RBP12.8□□□□□ -0.36
CTSD-201ENST00000236671 IGHV3OR15-7A0A075B7D8 119 aa12.79□□□□□ -0.36
CTSD-201ENST00000236671 SSTP61278 116 aa12.79□□□□□ -0.36
CTSD-201ENST00000236671 GCSAMQ8N6F7 178 aa12.79□□□□□ -0.36
CTSD-201ENST00000236671 SSMEM1Q8WWF3 244 aa12.79□□□□□ -0.36
CTSD-201ENST00000236671 WFIKKN1Q96NZ8 548 aa12.79□□□□□ -0.36
CTSD-201ENST00000236671 NDUFAF3Q9BU61 184 aa12.79□□□□□ -0.36
CTSD-201ENST00000236671 CHODLQ9H9P2 273 aa12.79□□□□□ -0.36
CTSD-201ENST00000236671 C15orf61A6NNL5 157 aa12.79□□□□□ -0.36
CTSD-201ENST00000236671 IL6RP08887 468 aaPredicted RBP12.79□□□□□ -0.36
CTSD-201ENST00000236671 TIMP3P35625 211 aa12.79□□□□□ -0.36
CTSD-201ENST00000236671 KIR2DS2P43631 304 aa12.79□□□□□ -0.36
CTSD-201ENST00000236671 ARSJQ5FYB0 599 aaPredicted RBP12.79□□□□□ -0.36
CTSD-201ENST00000236671 TEX38Q6PEX7 206 aa12.79□□□□□ -0.36
CTSD-201ENST00000236671 C2orf88Q9BSF0 95 aa12.79□□□□□ -0.36
CTSD-201ENST00000236671 PLSCR4Q9NRQ2 329 aa12.79□□□□□ -0.36
CTSD-201ENST00000236671 A0A1B0GUS0 222 aa12.78□□□□□ -0.36
CTSD-201ENST00000236671 CEACAM4O75871 244 aa12.78□□□□□ -0.36
CTSD-201ENST00000236671 SNRPCP09234 159 aaKnown RBP12.78□□□□□ -0.36
CTSD-201ENST00000236671 OR4A8P0C604 315 aa12.78□□□□□ -0.36
CTSD-201ENST00000236671 RNF224P0DH78 156 aa12.78□□□□□ -0.36
CTSD-201ENST00000236671 SPRNQ5BIV9 151 aa12.78□□□□□ -0.36
CTSD-201ENST00000236671 LRP11Q86VZ4 500 aa12.78□□□□□ -0.36
CTSD-201ENST00000236671 TMEM256Q8N2U0 113 aa12.78□□□□□ -0.36
CTSD-201ENST00000236671 ZNRF1Q8ND25 227 aa12.78□□□□□ -0.36
CTSD-201ENST00000236671 OCC1Q8TAD7 63 aa12.78□□□□□ -0.36
CTSD-201ENST00000236671 PPP1R35Q8TAP8 253 aa12.78□□□□□ -0.36
CTSD-201ENST00000236671 BBC3Q96PG8 261 aaPredicted RBP12.78□□□□□ -0.36
CTSD-201ENST00000236671 NPVFQ9HCQ7 196 aa12.78□□□□□ -0.36
CTSD-201ENST00000236671 CALYQ9NYX4 217 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms