RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 H1FXQ92522 213 aaKnown RBP10.84□□□□□ -0.67
MSH2-201ENST00000233146 ATP23Q9Y6H3 246 aa10.84□□□□□ -0.67
MSH2-201ENST00000233146 PCDH15Q96QU1 1955 aa10.84□□□□□ -0.67
MSH2-201ENST00000233146 TNFRSF13BO14836 293 aaPredicted RBP10.84□□□□□ -0.67
MSH2-201ENST00000233146 LEPROTL1O95214 131 aa10.84□□□□□ -0.67
MSH2-201ENST00000233146 MGST1P10620 155 aaKnown RBP10.84□□□□□ -0.67
MSH2-201ENST00000233146 FGF6P10767 208 aa10.84□□□□□ -0.67
MSH2-201ENST00000233146 CENPWQ5EE01 88 aa10.84□□□□□ -0.67
MSH2-201ENST00000233146 LHFPL2Q6ZUX7 228 aa10.84□□□□□ -0.67
MSH2-201ENST00000233146 TRAPPC2LQ9UL33 140 aa10.84□□□□□ -0.67
MSH2-201ENST00000233146 IGHV1-24A0A0C4DH33 117 aa10.83□□□□□ -0.68
MSH2-201ENST00000233146 GNG4P50150 75 aa10.83□□□□□ -0.68
MSH2-201ENST00000233146 FAM162BQ5T6X4 162 aa10.83□□□□□ -0.68
MSH2-201ENST00000233146 RLN3Q8WXF3 142 aa10.83□□□□□ -0.68
MSH2-201ENST00000233146 BORCS8Q96FH0 119 aa10.83□□□□□ -0.68
MSH2-201ENST00000233146 SERTAD4Q9NUC0 356 aa10.83□□□□□ -0.68
MSH2-201ENST00000233146 RABAC1Q9UI14 185 aa10.83□□□□□ -0.68
MSH2-201ENST00000233146 LRRC30A6NM36 301 aa10.83□□□□□ -0.68
MSH2-201ENST00000233146 C21orf140B9A014 251 aa10.83□□□□□ -0.68
MSH2-201ENST00000233146 LIPFP07098 398 aa10.83□□□□□ -0.68
MSH2-201ENST00000233146 SSBP2P81877 361 aaPredicted RBP10.83□□□□□ -0.68
MSH2-201ENST00000233146 AESQ08117 197 aa10.83□□□□□ -0.68
MSH2-201ENST00000233146 WDR74Q6RFH5 385 aaPredicted RBP10.83□□□□□ -0.68
MSH2-201ENST00000233146 FOXL2NBQ6ZUU3 175 aa10.83□□□□□ -0.68
MSH2-201ENST00000233146 RNF183Q96D59 192 aa10.83□□□□□ -0.68
MSH2-201ENST00000233146 MTCH1Q9NZJ7 389 aa10.83□□□□□ -0.68
MSH2-201ENST00000233146 ERG28Q9UKR5 140 aa10.83□□□□□ -0.68
MSH2-201ENST00000233146 KIR2DS1A0A191URI9 304 aa10.83□□□□□ -0.68
MSH2-201ENST00000233146 KIR2DS4P43632 304 aa10.83□□□□□ -0.68
MSH2-201ENST00000233146 EDDM3BP56851 147 aa10.83□□□□□ -0.68
MSH2-201ENST00000233146 KIR2DS1Q14954 304 aa10.83□□□□□ -0.68
MSH2-201ENST00000233146 SPEM1Q8N4L4 309 aa10.83□□□□□ -0.68
MSH2-201ENST00000233146 GPR82Q96P67 336 aa10.83□□□□□ -0.68
MSH2-201ENST00000233146 OR9G9P0C7N8 305 aa10.82□□□□□ -0.68
MSH2-201ENST00000233146 SAMD5Q5TGI4 173 aa10.82□□□□□ -0.68
MSH2-201ENST00000233146 FAM69BQ5VUD6 431 aa10.82□□□□□ -0.68
MSH2-201ENST00000233146 LRRC29Q8WV35 223 aa10.82□□□□□ -0.68
MSH2-201ENST00000233146 BMFQ96LC9 184 aa10.82□□□□□ -0.68
MSH2-201ENST00000233146 PRDM6Q9NQX0 595 aa10.82□□□□□ -0.68
MSH2-201ENST00000233146 DEPPQ9NTK1 212 aa10.82□□□□□ -0.68
MSH2-201ENST00000233146 WDR83OSQ9Y284 106 aa10.82□□□□□ -0.68
MSH2-201ENST00000233146 TLX3O43711 291 aaPredicted RBP10.82□□□□□ -0.68
MSH2-201ENST00000233146 PQLC2Q6ZP29 291 aa10.82□□□□□ -0.68
MSH2-201ENST00000233146 ZNF784Q8NCA9 323 aaPredicted RBP10.82□□□□□ -0.68
MSH2-201ENST00000233146 VGLL1Q99990 258 aa10.82□□□□□ -0.68
MSH2-201ENST00000233146 HELTA6NFD8 242 aa10.81□□□□□ -0.68
MSH2-201ENST00000233146 AREGP15514 252 aa10.81□□□□□ -0.68
MSH2-201ENST00000233146 CHCHD1Q96BP2 118 aaKnown RBP10.81□□□□□ -0.68
MSH2-201ENST00000233146 GALMQ96C23 342 aa10.81□□□□□ -0.68
MSH2-201ENST00000233146 IGLV2-14P01704 120 aa10.81□□□□□ -0.68
MSH2-201ENST00000233146 CCL2P13500 99 aa10.81□□□□□ -0.68
MSH2-201ENST00000233146 GCHFRP30047 84 aa10.81□□□□□ -0.68
MSH2-201ENST00000233146 RPS16P62249 146 aaKnown RBP10.81□□□□□ -0.68
MSH2-201ENST00000233146 ATP5G2Q06055 141 aa10.81□□□□□ -0.68
MSH2-201ENST00000233146 CEACAM16Q2WEN9 425 aa10.81□□□□□ -0.68
MSH2-201ENST00000233146 TIMM23BQ5SRD1 257 aa10.81□□□□□ -0.68
MSH2-201ENST00000233146 LINC01545Q5VT33 79 aa10.81□□□□□ -0.68
MSH2-201ENST00000233146 MAP1LC3CQ9BXW4 147 aa10.81□□□□□ -0.68
MSH2-201ENST00000233146 R4GN57 208 aa10.81□□□□□ -0.68
MSH2-201ENST00000233146 NPIPA3F8WFD2 350 aa10.81□□□□□ -0.68
MSH2-201ENST00000233146 NEURL1O76050 574 aa10.81□□□□□ -0.68
MSH2-201ENST00000233146 DRD3P35462 400 aa10.81□□□□□ -0.68
MSH2-201ENST00000233146 ZNF77Q15935 545 aa10.81□□□□□ -0.68
MSH2-201ENST00000233146 IBA57Q5T440 356 aaKnown RBP10.81□□□□□ -0.68
MSH2-201ENST00000233146 CARD17Q5XLA6 110 aa10.81□□□□□ -0.68
MSH2-201ENST00000233146 OR10D3Q8NH80 312 aa10.81□□□□□ -0.68
MSH2-201ENST00000233146 MCRIP2Q9BUT9 160 aaKnown RBP10.81□□□□□ -0.68
MSH2-201ENST00000233146 FGF22Q9HCT0 170 aa10.81□□□□□ -0.68
MSH2-201ENST00000233146 F8W1H4 67 aa10.8□□□□□ -0.68
MSH2-201ENST00000233146 CA1P00915 261 aaPredicted RBP10.8□□□□□ -0.68
MSH2-201ENST00000233146 WFDC2Q14508 124 aa10.8□□□□□ -0.68
MSH2-201ENST00000233146 TMEM164Q5U3C3 297 aa10.8□□□□□ -0.68
MSH2-201ENST00000233146 ACP7Q6ZNF0 438 aa10.8□□□□□ -0.68
MSH2-201ENST00000233146 GCSAMQ8N6F7 178 aa10.8□□□□□ -0.68
MSH2-201ENST00000233146 ZNF645Q8N7E2 425 aa10.8□□□□□ -0.68
MSH2-201ENST00000233146 OR4A16Q8NH70 328 aa10.8□□□□□ -0.68
MSH2-201ENST00000233146 SH2D2AQ9NP31 389 aa10.8□□□□□ -0.68
MSH2-201ENST00000233146 HIF1ANQ9NWT6 349 aa10.8□□□□□ -0.68
MSH2-201ENST00000233146 ALKBH4Q9NXW9 302 aa10.8□□□□□ -0.68
MSH2-201ENST00000233146 WNT16Q9UBV4 365 aa10.8□□□□□ -0.68
MSH2-201ENST00000233146 TNFRSF18Q9Y5U5 241 aa10.8□□□□□ -0.68
MSH2-201ENST00000233146 A0A0J9YY10 115 aa10.8□□□□□ -0.68
MSH2-201ENST00000233146 A0A1B0GX78 115 aa10.8□□□□□ -0.68
MSH2-201ENST00000233146 TNFSF11O14788 317 aa10.8□□□□□ -0.68
MSH2-201ENST00000233146 GAGE5Q13069 117 aa10.8□□□□□ -0.68
MSH2-201ENST00000233146 GAGE6Q13070 117 aa10.8□□□□□ -0.68
MSH2-201ENST00000233146 DHRS13Q6UX07 377 aa10.8□□□□□ -0.68
MSH2-201ENST00000233146 SSX8Q7RTT4 187 aa10.8□□□□□ -0.68
MSH2-201ENST00000233146 FGFRL1Q8N441 504 aa10.8□□□□□ -0.68
MSH2-201ENST00000233146 BADQ92934 168 aa10.8□□□□□ -0.68
MSH2-201ENST00000233146 MUC22E2RYF6 1773 aaPredicted RBP10.79□□□□□ -0.68
MSH2-201ENST00000233146 LOC102723996A0A087X1L8 192 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 M0R135 149 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 IGLV2-8P01709 118 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 OR5AL1P0C617 328 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 DEFB110Q30KQ9 67 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 TMEM92Q6UXU6 159 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 C8orf86Q6ZUL3 223 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 TEX45Q8NA69 505 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 GJC3Q8NFK1 279 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms