RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 TNFSF13O75888 250 aa10.24□□□□□ -0.77
NUP88-201ENST00000225696 ACTL6BO94805 426 aa10.24□□□□□ -0.77
NUP88-201ENST00000225696 CER1O95813 267 aa10.24□□□□□ -0.77
NUP88-201ENST00000225696 CGAP01215 116 aa10.24□□□□□ -0.77
NUP88-201ENST00000225696 ARG2P78540 354 aa10.24□□□□□ -0.77
NUP88-201ENST00000225696 GABRA6Q16445 453 aa10.24□□□□□ -0.77
NUP88-201ENST00000225696 BATFQ16520 125 aa10.24□□□□□ -0.77
NUP88-201ENST00000225696 KIAA1644Q3SXP7 199 aa10.24□□□□□ -0.77
NUP88-201ENST00000225696 AARDQ4LEZ3 155 aa10.24□□□□□ -0.77
NUP88-201ENST00000225696 MOB3BQ86TA1 216 aa10.24□□□□□ -0.77
NUP88-201ENST00000225696 STPG3Q8N7X2 389 aa10.24□□□□□ -0.77
NUP88-201ENST00000225696 PPIAL4AQ9Y536 164 aa10.24□□□□□ -0.77
NUP88-201ENST00000225696 SNURFLB1AK76 121 aa10.23□□□□□ -0.77
NUP88-201ENST00000225696 TFPI2P48307 235 aa10.23□□□□□ -0.77
NUP88-201ENST00000225696 TNFSF10P50591 281 aa10.23□□□□□ -0.77
NUP88-201ENST00000225696 TPPP2P59282 170 aa10.23□□□□□ -0.77
NUP88-201ENST00000225696 BAGE3Q86Y29 109 aa10.23□□□□□ -0.77
NUP88-201ENST00000225696 BAGE2Q86Y30 109 aa10.23□□□□□ -0.77
NUP88-201ENST00000225696 OR8I2Q8N0Y5 310 aa10.23□□□□□ -0.77
NUP88-201ENST00000225696 Q8N976 141 aa10.23□□□□□ -0.77
NUP88-201ENST00000225696 MIEN1Q9BRT3 115 aa10.23□□□□□ -0.77
NUP88-201ENST00000225696 GNB4Q9HAV0 340 aa10.23□□□□□ -0.77
NUP88-201ENST00000225696 V9GYV3 84 aa10.23□□□□□ -0.77
NUP88-201ENST00000225696 HEATR1Q9H583 2144 aaKnown RBP10.23□□□□□ -0.77
NUP88-201ENST00000225696 BRS3P32247 399 aa10.22□□□□□ -0.77
NUP88-201ENST00000225696 TMPRSS3P57727 454 aa10.22□□□□□ -0.77
NUP88-201ENST00000225696 MRPL49Q13405 166 aaKnown RBP10.22□□□□□ -0.77
NUP88-201ENST00000225696 MORN2Q502X0 79 aa10.22□□□□□ -0.77
NUP88-201ENST00000225696 SPRNQ5BIV9 151 aa10.22□□□□□ -0.77
NUP88-201ENST00000225696 MIR17HGQ75NE6 70 aa10.22□□□□□ -0.77
NUP88-201ENST00000225696 FAM90A1Q86YD7 464 aa10.22□□□□□ -0.77
NUP88-201ENST00000225696 DOLPP1Q86YN1 238 aa10.22□□□□□ -0.77
NUP88-201ENST00000225696 MMD2Q8IY49 270 aa10.22□□□□□ -0.77
NUP88-201ENST00000225696 MDS2Q8NDY4 140 aa10.22□□□□□ -0.77
NUP88-201ENST00000225696 OR4P4Q8NGL7 312 aa10.22□□□□□ -0.77
NUP88-201ENST00000225696 EAF1Q96JC9 268 aaPredicted RBP10.22□□□□□ -0.77
NUP88-201ENST00000225696 RCHY1Q96PM5 261 aa10.22□□□□□ -0.77
NUP88-201ENST00000225696 C20orf144Q9BQM9 153 aa10.22□□□□□ -0.77
NUP88-201ENST00000225696 RNASE7Q9H1E1 156 aaKnown RBP10.22□□□□□ -0.77
NUP88-201ENST00000225696 TMEM140Q9NV12 185 aa10.22□□□□□ -0.77
NUP88-201ENST00000225696 GNG12Q9UBI6 72 aa10.22□□□□□ -0.77
NUP88-201ENST00000225696 MPDU1O75352 247 aa10.22□□□□□ -0.77
NUP88-201ENST00000225696 RPLP1P05386 114 aaKnown RBP10.22□□□□□ -0.77
NUP88-201ENST00000225696 ESDP10768 282 aa10.22□□□□□ -0.77
NUP88-201ENST00000225696 ACP1P24666 158 aa10.22□□□□□ -0.77
NUP88-201ENST00000225696 FXYD3Q14802 87 aa10.22□□□□□ -0.77
NUP88-201ENST00000225696 PEAR1Q5VY43 1037 aaPredicted RBP10.22□□□□□ -0.77
NUP88-201ENST00000225696 TCTEX1D1Q8N7M0 179 aa10.22□□□□□ -0.77
NUP88-201ENST00000225696 WDR31Q8NA23 367 aa10.22□□□□□ -0.77
NUP88-201ENST00000225696 OR5AU1Q8NGC0 362 aa10.22□□□□□ -0.77
NUP88-201ENST00000225696 PRR7Q8TB68 274 aa10.22□□□□□ -0.77
NUP88-201ENST00000225696 TCF19Q9Y242 345 aa10.22□□□□□ -0.77
NUP88-201ENST00000225696 ARFGEF3Q5TH69 2177 aa10.22□□□□□ -0.77
NUP88-201ENST00000225696 IGHV3OR15-7A0A075B7D8 119 aa10.21□□□□□ -0.77
NUP88-201ENST00000225696 DLEU1O43261 78 aa10.21□□□□□ -0.77
NUP88-201ENST00000225696 SPINT2O43291 252 aa10.21□□□□□ -0.77
NUP88-201ENST00000225696 LAMTOR5O43504 91 aa10.21□□□□□ -0.77
NUP88-201ENST00000225696 IGFBP2P18065 325 aa10.21□□□□□ -0.77
NUP88-201ENST00000225696 GATA2P23769 480 aaPredicted RBP10.21□□□□□ -0.77
NUP88-201ENST00000225696 TCL1AP56279 114 aa10.21□□□□□ -0.77
NUP88-201ENST00000225696 PAFAH1B2P68402 229 aa10.21□□□□□ -0.77
NUP88-201ENST00000225696 SAMD10Q9BYL1 202 aa10.21□□□□□ -0.77
NUP88-201ENST00000225696 LPAR2Q9HBW0 351 aa10.21□□□□□ -0.77
NUP88-201ENST00000225696 DMXL2Q8TDJ6 3036 aa10.21□□□□□ -0.78
NUP88-201ENST00000225696 IGKV1D-17A0A075B6S4 117 aa10.21□□□□□ -0.78
NUP88-201ENST00000225696 TIMM8AO60220 97 aaPredicted RBP10.21□□□□□ -0.78
NUP88-201ENST00000225696 CRYBB3P26998 211 aa10.21□□□□□ -0.78
NUP88-201ENST00000225696 PRDX2P32119 198 aa10.21□□□□□ -0.78
NUP88-201ENST00000225696 LOXL3P58215 753 aa10.21□□□□□ -0.78
NUP88-201ENST00000225696 KRTDAPP60985 99 aa10.21□□□□□ -0.78
NUP88-201ENST00000225696 ZNRF1Q8ND25 227 aa10.21□□□□□ -0.78
NUP88-201ENST00000225696 LRRC29Q8WV35 223 aa10.21□□□□□ -0.78
NUP88-201ENST00000225696 BTF3L4Q96K17 158 aa10.21□□□□□ -0.78
NUP88-201ENST00000225696 CXXC4Q9H2H0 198 aa10.21□□□□□ -0.78
NUP88-201ENST00000225696 IFI27L2Q9H2X8 130 aa10.21□□□□□ -0.78
NUP88-201ENST00000225696 DUSP13Q9UII6 198 aa10.21□□□□□ -0.78
NUP88-201ENST00000225696 TRGV5A0A0B4J1U4 118 aa10.2□□□□□ -0.78
NUP88-201ENST00000225696 J3QW42 95 aa10.2□□□□□ -0.78
NUP88-201ENST00000225696 HTD2P86397 168 aa10.2□□□□□ -0.78
NUP88-201ENST00000225696 CENPWQ5EE01 88 aa10.2□□□□□ -0.78
NUP88-201ENST00000225696 PQLC2Q6ZP29 291 aa10.2□□□□□ -0.78
NUP88-201ENST00000225696 FAM216AQ8WUB2 273 aa10.2□□□□□ -0.78
NUP88-201ENST00000225696 ZNF503Q96F45 646 aa10.2□□□□□ -0.78
NUP88-201ENST00000225696 VAMP8Q9BV40 100 aa10.2□□□□□ -0.78
NUP88-201ENST00000225696 NPVFQ9HCQ7 196 aa10.2□□□□□ -0.78
NUP88-201ENST00000225696 ABI3Q9P2A4 366 aa10.2□□□□□ -0.78
NUP88-201ENST00000225696 GOLT1BQ9Y3E0 138 aa10.2□□□□□ -0.78
NUP88-201ENST00000225696 TECTAO75443 2155 aa10.2□□□□□ -0.78
NUP88-201ENST00000225696 PCNX2A6NKB5 2137 aa10.2□□□□□ -0.78
NUP88-201ENST00000225696 IGKV1OR2-108A0A075B7D4 117 aa10.19□□□□□ -0.78
NUP88-201ENST00000225696 KLRC4-KLRK1H3BQV0 150 aa10.19□□□□□ -0.78
NUP88-201ENST00000225696 TNFSF15O95150 251 aa10.19□□□□□ -0.78
NUP88-201ENST00000225696 CA2P00918 260 aa10.19□□□□□ -0.78
NUP88-201ENST00000225696 GPX1P07203 203 aa10.19□□□□□ -0.78
NUP88-201ENST00000225696 LINC00869P0C866 280 aa10.19□□□□□ -0.78
NUP88-201ENST00000225696 RPEL1Q2QD12 228 aa10.19□□□□□ -0.78
NUP88-201ENST00000225696 TEPPQ6URK8 271 aa10.19□□□□□ -0.78
NUP88-201ENST00000225696 C11orf52Q96A22 123 aa10.19□□□□□ -0.78
NUP88-201ENST00000225696 TRGV10A0A0A0MS01 117 aa10.19□□□□□ -0.78
NUP88-201ENST00000225696 CA1P00915 261 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms