RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 COX6A1P12074 109 aa11.87□□□□□ -0.51
SHPK-201ENST00000225519 TNFSF4P23510 183 aa11.87□□□□□ -0.51
SHPK-201ENST00000225519 CRYBB3P26998 211 aa11.87□□□□□ -0.51
SHPK-201ENST00000225519 ARR3P36575 388 aa11.87□□□□□ -0.51
SHPK-201ENST00000225519 CTRLP40313 264 aa11.87□□□□□ -0.51
SHPK-201ENST00000225519 ERVK-16P61578 105 aa11.87□□□□□ -0.51
SHPK-201ENST00000225519 MRPL14Q6P1L8 145 aaKnown RBP11.87□□□□□ -0.51
SHPK-201ENST00000225519 LYG1Q8N1E2 194 aa11.87□□□□□ -0.51
SHPK-201ENST00000225519 APCSP02743 223 aa11.87□□□□□ -0.51
SHPK-201ENST00000225519 LTBRP36941 435 aa11.87□□□□□ -0.51
SHPK-201ENST00000225519 VWC2Q2TAL6 325 aa11.87□□□□□ -0.51
SHPK-201ENST00000225519 ABHD12Q8N2K0 398 aa11.87□□□□□ -0.51
SHPK-201ENST00000225519 ZNF439Q8NDP4 499 aa11.87□□□□□ -0.51
SHPK-201ENST00000225519 CLCF1Q9UBD9 225 aa11.87□□□□□ -0.51
SHPK-201ENST00000225519 CA2P00918 260 aa11.86□□□□□ -0.51
SHPK-201ENST00000225519 CGAP01215 116 aa11.86□□□□□ -0.51
SHPK-201ENST00000225519 USF1P22415 310 aaPredicted RBP11.86□□□□□ -0.51
SHPK-201ENST00000225519 OR10J3Q5JRS4 329 aa11.86□□□□□ -0.51
SHPK-201ENST00000225519 C19orf35Q6ZS72 473 aa11.86□□□□□ -0.51
SHPK-201ENST00000225519 IMMP1LQ96LU5 166 aa11.86□□□□□ -0.51
SHPK-201ENST00000225519 GGTLC1Q9BX51 225 aa11.86□□□□□ -0.51
SHPK-201ENST00000225519 M0R2Z0 102 aa11.86□□□□□ -0.51
SHPK-201ENST00000225519 PSG5Q15238 335 aa11.86□□□□□ -0.51
SHPK-201ENST00000225519 DCAF12Q5T6F0 453 aa11.86□□□□□ -0.51
SHPK-201ENST00000225519 CXorf67Q86X51 503 aaPredicted RBP11.86□□□□□ -0.51
SHPK-201ENST00000225519 Q8IYB0 196 aa11.86□□□□□ -0.51
SHPK-201ENST00000225519 TPRX1Q8N7U7 411 aa11.86□□□□□ -0.51
SHPK-201ENST00000225519 SCCPDHQ8NBX0 429 aa11.86□□□□□ -0.51
SHPK-201ENST00000225519 MGST2Q99735 147 aa11.86□□□□□ -0.51
SHPK-201ENST00000225519 SFXN3Q9BWM7 321 aa11.86□□□□□ -0.51
SHPK-201ENST00000225519 PMCHL1Q16048 86 aa11.86□□□□□ -0.51
SHPK-201ENST00000225519 RNASEKQ6P5S7 137 aaKnown RBP11.86□□□□□ -0.51
SHPK-201ENST00000225519 SLC24A4Q8NFF2 622 aa11.86□□□□□ -0.51
SHPK-201ENST00000225519 SEPSECSQ9HD40 501 aaKnown RBP11.86□□□□□ -0.51
SHPK-201ENST00000225519 ZNF503-AS2A6NEH8 195 aa11.85□□□□□ -0.51
SHPK-201ENST00000225519 OR7C2O60412 319 aa11.85□□□□□ -0.51
SHPK-201ENST00000225519 HAND1O96004 215 aa11.85□□□□□ -0.51
SHPK-201ENST00000225519 HLA-DQA1P01909 254 aa11.85□□□□□ -0.51
SHPK-201ENST00000225519 CDKN1BP46527 198 aa11.85□□□□□ -0.51
SHPK-201ENST00000225519 Q8N976 141 aa11.85□□□□□ -0.51
SHPK-201ENST00000225519 OR2M7Q8NG81 312 aa11.85□□□□□ -0.51
SHPK-201ENST00000225519 FOXH1O75593 365 aa11.85□□□□□ -0.51
SHPK-201ENST00000225519 OR9G9P0C7N8 305 aa11.85□□□□□ -0.51
SHPK-201ENST00000225519 COX19Q49B96 90 aa11.85□□□□□ -0.51
SHPK-201ENST00000225519 V9GYV3 84 aa11.85□□□□□ -0.51
SHPK-201ENST00000225519 LOC102724200A0A096LPH7 203 aaPredicted RBP11.85□□□□□ -0.51
SHPK-201ENST00000225519 AMY1AP04745 511 aa11.85□□□□□ -0.51
SHPK-201ENST00000225519 RELBQ01201 579 aa11.85□□□□□ -0.51
SHPK-201ENST00000225519 VKORC1L1Q8N0U8 176 aa11.85□□□□□ -0.51
SHPK-201ENST00000225519 ZNF596Q8TC21 504 aa11.85□□□□□ -0.51
SHPK-201ENST00000225519 ST6GALNAC6Q969X2 333 aa11.85□□□□□ -0.51
SHPK-201ENST00000225519 POM121L2Q96KW2 1035 aa11.85□□□□□ -0.51
SHPK-201ENST00000225519 CLEC7AQ9BXN2 247 aa11.85□□□□□ -0.51
SHPK-201ENST00000225519 ENY2Q9NPA8 101 aa11.85□□□□□ -0.51
SHPK-201ENST00000225519 YLPM1P49750 1951 aaKnown RBP11.84□□□□□ -0.51
SHPK-201ENST00000225519 FOLR3P41439 243 aa11.84□□□□□ -0.51
SHPK-201ENST00000225519 CX3CL1P78423 397 aa11.84□□□□□ -0.51
SHPK-201ENST00000225519 TMEM136Q6ZRR5 245 aa11.84□□□□□ -0.51
SHPK-201ENST00000225519 OR2D3Q8NGH3 330 aa11.84□□□□□ -0.51
SHPK-201ENST00000225519 TSKUQ8WUA8 353 aa11.84□□□□□ -0.51
SHPK-201ENST00000225519 SH2D2AQ9NP31 389 aa11.84□□□□□ -0.51
SHPK-201ENST00000225519 MMP23AO75900 390 aa11.84□□□□□ -0.51
SHPK-201ENST00000225519 MT-CO3P00414 261 aa11.84□□□□□ -0.51
SHPK-201ENST00000225519 GPR12P47775 334 aa11.84□□□□□ -0.51
SHPK-201ENST00000225519 TMEM249Q2WGJ8 235 aa11.84□□□□□ -0.51
SHPK-201ENST00000225519 SMIM15Q7Z3B0 74 aa11.84□□□□□ -0.51
SHPK-201ENST00000225519 LOXL4Q96JB6 756 aa11.84□□□□□ -0.51
SHPK-201ENST00000225519 HSD17B10Q99714 261 aaKnown RBP11.84□□□□□ -0.51
SHPK-201ENST00000225519 C12orf49Q9H741 205 aa11.84□□□□□ -0.51
SHPK-201ENST00000225519 TRGV10A0A0A0MS01 117 aa11.84□□□□□ -0.51
SHPK-201ENST00000225519 LINC00473A8K010 186 aa11.84□□□□□ -0.51
SHPK-201ENST00000225519 C9JCJ5 164 aa11.84□□□□□ -0.51
SHPK-201ENST00000225519 ZNF718Q3SXZ3 478 aa11.84□□□□□ -0.51
SHPK-201ENST00000225519 STPG3Q8N7X2 389 aa11.84□□□□□ -0.51
SHPK-201ENST00000225519 NPVFQ9HCQ7 196 aa11.84□□□□□ -0.51
SHPK-201ENST00000225519 MBNL3Q9NUK0 354 aaKnown RBP11.84□□□□□ -0.51
SHPK-201ENST00000225519 GNG12Q9UBI6 72 aa11.84□□□□□ -0.51
SHPK-201ENST00000225519 IGHV2OR16-5A0A0B4J2B6 119 aa11.83□□□□□ -0.52
SHPK-201ENST00000225519 OOEPA6NGQ2 149 aa11.83□□□□□ -0.52
SHPK-201ENST00000225519 M0QZ24 198 aa11.83□□□□□ -0.52
SHPK-201ENST00000225519 BMPR1BO00238 502 aa11.83□□□□□ -0.52
SHPK-201ENST00000225519 IGHV3-13P01766 116 aa11.83□□□□□ -0.52
SHPK-201ENST00000225519 IGHV3-7P01780 117 aa11.83□□□□□ -0.52
SHPK-201ENST00000225519 EFNB3Q15768 340 aa11.83□□□□□ -0.52
SHPK-201ENST00000225519 IBA57Q5T440 356 aaKnown RBP11.83□□□□□ -0.52
SHPK-201ENST00000225519 C5orf30Q96GV9 206 aa11.83□□□□□ -0.52
SHPK-201ENST00000225519 WDR54Q9H977 334 aa11.83□□□□□ -0.52
SHPK-201ENST00000225519 IL19Q9UHD0 177 aa11.83□□□□□ -0.52
SHPK-201ENST00000225519 MRPS16Q9Y3D3 137 aaKnown RBP11.83□□□□□ -0.52
SHPK-201ENST00000225519 ARL2-SNX15V9GYD0 113 aa11.83□□□□□ -0.52
SHPK-201ENST00000225519 LOC102723996A0A087X1L8 192 aa11.83□□□□□ -0.52
SHPK-201ENST00000225519 S100A7P31151 101 aa11.83□□□□□ -0.52
SHPK-201ENST00000225519 CXCL12P48061 93 aa11.83□□□□□ -0.52
SHPK-201ENST00000225519 EDDM3AQ14507 147 aa11.83□□□□□ -0.52
SHPK-201ENST00000225519 NIT1Q86X76 327 aa11.83□□□□□ -0.52
SHPK-201ENST00000225519 OBP2BQ9NPH6 170 aa11.83□□□□□ -0.52
SHPK-201ENST00000225519 CDC42EP3Q9UKI2 254 aa11.83□□□□□ -0.52
SHPK-201ENST00000225519 WASHC3Q9Y3C0 194 aa11.83□□□□□ -0.52
SHPK-201ENST00000225519 CA1P00915 261 aaPredicted RBP11.83□□□□□ -0.52
SHPK-201ENST00000225519 P0C879 139 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms