RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 RRHO14718 337 aa15.53■□□□□ 0.08
CLIP2-201ENST00000223398 MEF2CQ06413 473 aaPredicted RBP15.53■□□□□ 0.08
CLIP2-201ENST00000223398 TMEM177Q53S58 311 aa15.53■□□□□ 0.08
CLIP2-201ENST00000223398 LINC00305Q7Z4B0 112 aa15.53■□□□□ 0.08
CLIP2-201ENST00000223398 TRAV40A0A0B4J280 105 aa15.52■□□□□ 0.08
CLIP2-201ENST00000223398 SHISA3A0PJX4 238 aa15.52■□□□□ 0.08
CLIP2-201ENST00000223398 CRYBB3P26998 211 aa15.52■□□□□ 0.08
CLIP2-201ENST00000223398 COX19Q49B96 90 aa15.52■□□□□ 0.08
CLIP2-201ENST00000223398 OSR1Q8TAX0 266 aaPredicted RBP15.52■□□□□ 0.08
CLIP2-201ENST00000223398 A0A1B0GTI1 187 aa15.52■□□□□ 0.08
CLIP2-201ENST00000223398 TMEM183BQ1AE95 376 aa15.52■□□□□ 0.08
CLIP2-201ENST00000223398 C11orf91Q3C1V1 193 aa15.52■□□□□ 0.08
CLIP2-201ENST00000223398 TSPOP30536 169 aa15.52■□□□□ 0.07
CLIP2-201ENST00000223398 WDR82Q6UXN9 313 aa15.52■□□□□ 0.07
CLIP2-201ENST00000223398 PQLC2LA1A4F0 135 aa15.52■□□□□ 0.07
CLIP2-201ENST00000223398 DMRTA2Q96SC8 542 aa15.52■□□□□ 0.07
CLIP2-201ENST00000223398 MSGN1A6NI15 193 aa15.52■□□□□ 0.07
CLIP2-201ENST00000223398 C9JCJ5 164 aa15.52■□□□□ 0.07
CLIP2-201ENST00000223398 ZNF250P15622 560 aa15.52■□□□□ 0.07
CLIP2-201ENST00000223398 EMP1P54849 157 aa15.52■□□□□ 0.07
CLIP2-201ENST00000223398 C17orf82Q86X59 251 aaPredicted RBP15.52■□□□□ 0.07
CLIP2-201ENST00000223398 SRSF12Q8WXF0 261 aaKnown RBP15.52■□□□□ 0.07
CLIP2-201ENST00000223398 A0A0G2JLM5 398 aa15.51■□□□□ 0.07
CLIP2-201ENST00000223398 SIAH2O43255 324 aa15.51■□□□□ 0.07
CLIP2-201ENST00000223398 EFNA2O43921 213 aa15.51■□□□□ 0.07
CLIP2-201ENST00000223398 CKS2P33552 79 aa15.51■□□□□ 0.07
CLIP2-201ENST00000223398 IGLV3-32A0A0A0MS00 114 aa15.51■□□□□ 0.07
CLIP2-201ENST00000223398 SRSF9Q13242 221 aaKnown RBP eCLIP15.51■□□□□ 0.07
CLIP2-201ENST00000223398 ZNF502Q8TBZ5 544 aa15.51■□□□□ 0.07
CLIP2-201ENST00000223398 ARHGEF17Q96PE2 2063 aaPredicted RBP15.51■□□□□ 0.07
CLIP2-201ENST00000223398 ZNF646O15015 1829 aaPredicted RBP15.51■□□□□ 0.07
CLIP2-201ENST00000223398 A0A087WV48 116 aa15.51■□□□□ 0.07
CLIP2-201ENST00000223398 VDAC2P45880 294 aaPredicted RBP15.51■□□□□ 0.07
CLIP2-201ENST00000223398 DLX6P56179 175 aa15.51■□□□□ 0.07
CLIP2-201ENST00000223398 MEOX2P50222 304 aa15.51■□□□□ 0.07
CLIP2-201ENST00000223398 SULT1A2P50226 295 aa15.51■□□□□ 0.07
CLIP2-201ENST00000223398 UCP3P55916 312 aa15.51■□□□□ 0.07
CLIP2-201ENST00000223398 FAM3BP58499 235 aaPredicted RBP15.51■□□□□ 0.07
CLIP2-201ENST00000223398 MEF2BQ02080 365 aaPredicted RBP15.51■□□□□ 0.07
CLIP2-201ENST00000223398 TBX15Q96SF7 602 aa15.51■□□□□ 0.07
CLIP2-201ENST00000223398 NPFFR1Q9GZQ6 430 aa15.51■□□□□ 0.07
CLIP2-201ENST00000223398 NPIPB6E9PJ23 425 aa15.5■□□□□ 0.07
CLIP2-201ENST00000223398 CD69Q07108 199 aa15.5■□□□□ 0.07
CLIP2-201ENST00000223398 CFDP00746 253 aaPredicted RBP15.5■□□□□ 0.07
CLIP2-201ENST00000223398 HTN3P15516 51 aa15.5■□□□□ 0.07
CLIP2-201ENST00000223398 ZNF56Q15929 161 aa15.5■□□□□ 0.07
CLIP2-201ENST00000223398 SMIM8Q96KF7 97 aa15.5■□□□□ 0.07
CLIP2-201ENST00000223398 IGHV1-46P01743 117 aa15.5■□□□□ 0.07
CLIP2-201ENST00000223398 TIMP3P35625 211 aa15.5■□□□□ 0.07
CLIP2-201ENST00000223398 LYZL4Q96KX0 146 aa15.5■□□□□ 0.07
CLIP2-201ENST00000223398 C21orf62Q9NYP8 219 aa15.5■□□□□ 0.07
CLIP2-201ENST00000223398 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.5■□□□□ 0.07
CLIP2-201ENST00000223398 OR4C46A6NHA9 309 aa15.5■□□□□ 0.07
CLIP2-201ENST00000223398 FAM74A7A6NL05 159 aa15.5■□□□□ 0.07
CLIP2-201ENST00000223398 ZNF324O75467 553 aaPredicted RBP15.5■□□□□ 0.07
CLIP2-201ENST00000223398 C2orf83Q53S99 150 aa15.5■□□□□ 0.07
CLIP2-201ENST00000223398 DHRS11Q6UWP2 260 aa15.5■□□□□ 0.07
CLIP2-201ENST00000223398 GGNQ86UU5 652 aa15.5■□□□□ 0.07
CLIP2-201ENST00000223398 NSUN5P1Q3KNT7 163 aa15.49■□□□□ 0.07
CLIP2-201ENST00000223398 TM2D1Q9BX74 207 aa15.49■□□□□ 0.07
CLIP2-201ENST00000223398 NYNRINQ9P2P1 1898 aaKnown RBP15.49■□□□□ 0.07
CLIP2-201ENST00000223398 SIGIRRQ6IA17 410 aa15.49■□□□□ 0.07
CLIP2-201ENST00000223398 NEU1Q99519 415 aa15.49■□□□□ 0.07
CLIP2-201ENST00000223398 LINC00527Q9UJ94 153 aa15.49■□□□□ 0.07
CLIP2-201ENST00000223398 A0A0G2JNJ9 132 aa15.49■□□□□ 0.07
CLIP2-201ENST00000223398 M0R3E3 92 aa15.49■□□□□ 0.07
CLIP2-201ENST00000223398 H2BFSP57053 126 aa15.49■□□□□ 0.07
CLIP2-201ENST00000223398 RELBQ01201 579 aa15.49■□□□□ 0.07
CLIP2-201ENST00000223398 FAM159AQ6UWV7 190 aa15.49■□□□□ 0.07
CLIP2-201ENST00000223398 OR1N2Q8NGR9 330 aa15.49■□□□□ 0.07
CLIP2-201ENST00000223398 Q9UFV3 132 aa15.49■□□□□ 0.07
CLIP2-201ENST00000223398 CD74P04233 296 aa15.49■□□□□ 0.07
CLIP2-201ENST00000223398 ICAM4Q14773 271 aa15.49■□□□□ 0.07
CLIP2-201ENST00000223398 SAA2-SAA4A0A096LPE2 208 aa15.49■□□□□ 0.07
CLIP2-201ENST00000223398 SAA2P0DJI9 122 aaPredicted RBP15.49■□□□□ 0.07
CLIP2-201ENST00000223398 ZNF672Q499Z4 452 aaPredicted RBP15.49■□□□□ 0.07
CLIP2-201ENST00000223398 CYP2G1PQ6ZSU1 146 aa15.49■□□□□ 0.07
CLIP2-201ENST00000223398 MSRB2Q9Y3D2 182 aa15.49■□□□□ 0.07
CLIP2-201ENST00000223398 RALGAPA1Q6GYQ0 2036 aa15.48■□□□□ 0.07
CLIP2-201ENST00000223398 SIGLEC5O15389 551 aa15.48■□□□□ 0.07
CLIP2-201ENST00000223398 WNT10AQ9GZT5 417 aa15.48■□□□□ 0.07
CLIP2-201ENST00000223398 IFI27L2Q9H2X8 130 aa15.48■□□□□ 0.07
CLIP2-201ENST00000223398 C5orf52A6NGY3 159 aa15.48■□□□□ 0.07
CLIP2-201ENST00000223398 CD99P14209 185 aa15.48■□□□□ 0.07
CLIP2-201ENST00000223398 RAB9AP51151 201 aa15.48■□□□□ 0.07
CLIP2-201ENST00000223398 NUTF2P61970 127 aaKnown RBP15.48■□□□□ 0.07
CLIP2-201ENST00000223398 RPS11P62280 158 aaKnown RBP eCLIP15.48■□□□□ 0.07
CLIP2-201ENST00000223398 ZNF343Q6P1L6 599 aa15.48■□□□□ 0.07
CLIP2-201ENST00000223398 RARRES2Q99969 163 aa15.48■□□□□ 0.07
CLIP2-201ENST00000223398 TMEM262E9PQX1 116 aa15.47■□□□□ 0.07
CLIP2-201ENST00000223398 SBF1O95248 1867 aa15.47■□□□□ 0.07
CLIP2-201ENST00000223398 FAM90A1Q86YD7 464 aa15.47■□□□□ 0.07
CLIP2-201ENST00000223398 TMEM133Q9H2Q1 129 aa15.47■□□□□ 0.07
CLIP2-201ENST00000223398 KLK15Q9H2R5 256 aa15.47■□□□□ 0.07
CLIP2-201ENST00000223398 HSPB8Q9UJY1 196 aa15.47■□□□□ 0.07
CLIP2-201ENST00000223398 MED12Q93074 2177 aa15.47■□□□□ 0.07
CLIP2-201ENST00000223398 ELOA3CA0A087WX78 387 aaPredicted RBP15.47■□□□□ 0.07
CLIP2-201ENST00000223398 MIEN1Q9BRT3 115 aa15.47■□□□□ 0.07
CLIP2-201ENST00000223398 SMAGPQ0VAQ4 97 aa15.47■□□□□ 0.07
CLIP2-201ENST00000223398 PACRGQ96M98 296 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms