RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 RBMY1BA6NDE4 496 aaKnown RBP8.93□□□□□ -0.98
TRPS1-201ENST00000220888 RBMY1EA6NEQ0 496 aaKnown RBP8.93□□□□□ -0.98
TRPS1-201ENST00000220888 RBMY1DP0C7P1 496 aaKnown RBP8.93□□□□□ -0.98
TRPS1-201ENST00000220888 RBMY1A1P0DJD3 496 aaKnown RBP8.93□□□□□ -0.98
TRPS1-201ENST00000220888 RBMY1CP0DJD4 496 aa8.93□□□□□ -0.98
TRPS1-201ENST00000220888 LOC390937A0A1W2PQ73 354 aa8.93□□□□□ -0.98
TRPS1-201ENST00000220888 TMEM8BA6NDV4 472 aa8.93□□□□□ -0.98
TRPS1-201ENST00000220888 CA7P43166 264 aa8.93□□□□□ -0.98
TRPS1-201ENST00000220888 IGLV3-21P80748 117 aaPredicted RBP8.93□□□□□ -0.98
TRPS1-201ENST00000220888 FAM90A1Q86YD7 464 aa8.93□□□□□ -0.98
TRPS1-201ENST00000220888 OR10AG1Q8NH19 301 aa8.93□□□□□ -0.98
TRPS1-201ENST00000220888 B4DSR2 109 aa8.93□□□□□ -0.98
TRPS1-201ENST00000220888 EFNA4P52798 201 aa8.93□□□□□ -0.98
TRPS1-201ENST00000220888 TMEM91Q6ZNR0 172 aa8.93□□□□□ -0.98
TRPS1-201ENST00000220888 NUDT11Q96G61 164 aa8.93□□□□□ -0.98
TRPS1-201ENST00000220888 Q96M66 194 aa8.93□□□□□ -0.98
TRPS1-201ENST00000220888 BEX4Q9NWD9 120 aaPredicted RBP8.93□□□□□ -0.98
TRPS1-201ENST00000220888 RNF114Q9Y508 228 aa8.93□□□□□ -0.98
TRPS1-201ENST00000220888 WDR82Q6UXN9 313 aa8.93□□□□□ -0.98
TRPS1-201ENST00000220888 POC1AQ8NBT0 407 aa8.93□□□□□ -0.98
TRPS1-201ENST00000220888 OR5AN1Q8NGI8 311 aa8.93□□□□□ -0.98
TRPS1-201ENST00000220888 KCNS1Q96KK3 526 aa8.93□□□□□ -0.98
TRPS1-201ENST00000220888 IFI27L2Q9H2X8 130 aa8.93□□□□□ -0.98
TRPS1-201ENST00000220888 BCORQ6W2J9 1755 aa8.93□□□□□ -0.98
TRPS1-201ENST00000220888 KLF4O43474 513 aa8.92□□□□□ -0.98
TRPS1-201ENST00000220888 EIF3GO75821 320 aaKnown RBP eCLIP8.92□□□□□ -0.98
TRPS1-201ENST00000220888 SMIM10L1P0DMW3 83 aa8.92□□□□□ -0.98
TRPS1-201ENST00000220888 KIR3DL3Q8N743 410 aa8.92□□□□□ -0.98
TRPS1-201ENST00000220888 APCDD1LQ8NCL9 501 aa8.92□□□□□ -0.98
TRPS1-201ENST00000220888 SMIM10Q96HG1 83 aa8.92□□□□□ -0.98
TRPS1-201ENST00000220888 PAM16Q9Y3D7 125 aa8.92□□□□□ -0.98
TRPS1-201ENST00000220888 VIRMAQ69YN4 1812 aaKnown RBP8.92□□□□□ -0.98
TRPS1-201ENST00000220888 TRBV5-5A0A0J9YX44 114 aa8.92□□□□□ -0.98
TRPS1-201ENST00000220888 MSGN1A6NI15 193 aa8.92□□□□□ -0.98
TRPS1-201ENST00000220888 IGF2P01344 180 aa8.92□□□□□ -0.98
TRPS1-201ENST00000220888 DMRTA2Q96SC8 542 aa8.92□□□□□ -0.98
TRPS1-201ENST00000220888 GPHA2Q96T91 129 aa8.92□□□□□ -0.98
TRPS1-201ENST00000220888 MRPL20Q9BYC9 149 aaKnown RBP8.92□□□□□ -0.98
TRPS1-201ENST00000220888 WNT10AQ9GZT5 417 aa8.92□□□□□ -0.98
TRPS1-201ENST00000220888 SMDT1Q9H4I9 107 aa8.92□□□□□ -0.98
TRPS1-201ENST00000220888 TRBV7-9A0A0J9YWB2 115 aa8.92□□□□□ -0.98
TRPS1-201ENST00000220888 LIMS1P48059 325 aa8.92□□□□□ -0.98
TRPS1-201ENST00000220888 C1orf100Q5SVJ3 147 aa8.92□□□□□ -0.98
TRPS1-201ENST00000220888 SCN1AP35498 2009 aa8.92□□□□□ -0.98
TRPS1-201ENST00000220888 HLA-DRB1P01911 266 aa8.92□□□□□ -0.98
TRPS1-201ENST00000220888 ERVK11-1P61568 191 aa8.92□□□□□ -0.98
TRPS1-201ENST00000220888 NCMAPQ5T1S8 102 aa8.92□□□□□ -0.98
TRPS1-201ENST00000220888 RFLNBQ8N5W9 214 aa8.92□□□□□ -0.98
TRPS1-201ENST00000220888 CYB561D1Q8N8Q1 229 aa8.92□□□□□ -0.98
TRPS1-201ENST00000220888 ALX4Q9H161 411 aaPredicted RBP8.92□□□□□ -0.98
TRPS1-201ENST00000220888 MRPS18AQ9NVS2 196 aaKnown RBP8.92□□□□□ -0.98
TRPS1-201ENST00000220888 TRIP11Q15643 1979 aa8.92□□□□□ -0.98
TRPS1-201ENST00000220888 UBE2V2Q15819 145 aa8.91□□□□□ -0.98
TRPS1-201ENST00000220888 ABLIM2Q6H8Q1 611 aa8.91□□□□□ -0.98
TRPS1-201ENST00000220888 AKIRIN1Q9H9L7 192 aaPredicted RBP8.91□□□□□ -0.98
TRPS1-201ENST00000220888 ABCA4P78363 2273 aa8.91□□□□□ -0.98
TRPS1-201ENST00000220888 C12orf77C9JDV5 145 aa8.91□□□□□ -0.98
TRPS1-201ENST00000220888 NBEAP1P0C6P0 100 aa8.91□□□□□ -0.98
TRPS1-201ENST00000220888 GPR132Q9UNW8 380 aa8.91□□□□□ -0.98
TRPS1-201ENST00000220888 TRAV14DV4A0A0A6YYC5 116 aa8.91□□□□□ -0.98
TRPS1-201ENST00000220888 IGHMP01871 453 aa8.91□□□□□ -0.98
TRPS1-201ENST00000220888 CD7P09564 240 aa8.91□□□□□ -0.98
TRPS1-201ENST00000220888 PSG7Q13046 419 aa8.91□□□□□ -0.98
TRPS1-201ENST00000220888 PRSS53Q2L4Q9 553 aa8.91□□□□□ -0.98
TRPS1-201ENST00000220888 HIST1H2BAQ96A08 127 aa8.91□□□□□ -0.98
TRPS1-201ENST00000220888 PLAC1Q9HBJ0 212 aa8.91□□□□□ -0.98
TRPS1-201ENST00000220888 A0A087WX48 190 aa8.91□□□□□ -0.98
TRPS1-201ENST00000220888 A0A0G2JMM0 328 aa8.91□□□□□ -0.98
TRPS1-201ENST00000220888 A0A1W2PPB8 328 aa8.91□□□□□ -0.98
TRPS1-201ENST00000220888 A0A1W2PRS3 328 aa8.91□□□□□ -0.98
TRPS1-201ENST00000220888 KIR3DP1A8MWS1 328 aa8.91□□□□□ -0.98
TRPS1-201ENST00000220888 LYNX1G3V0Z9 82 aa8.91□□□□□ -0.98
TRPS1-201ENST00000220888 GREM1O60565 184 aa8.91□□□□□ -0.98
TRPS1-201ENST00000220888 LYNX1P0DP58 116 aa8.91□□□□□ -0.98
TRPS1-201ENST00000220888 SMIM8Q96KF7 97 aa8.91□□□□□ -0.98
TRPS1-201ENST00000220888 NPIPB13A6NJU9 1138 aa8.91□□□□□ -0.98
TRPS1-201ENST00000220888 OR11H12B2RN74 326 aa8.91□□□□□ -0.98
TRPS1-201ENST00000220888 IGLV3-19P01714 112 aa8.91□□□□□ -0.98
TRPS1-201ENST00000220888 ZNF818PQ6ZRF7 136 aa8.91□□□□□ -0.98
TRPS1-201ENST00000220888 OR11H1Q8NG94 326 aa8.91□□□□□ -0.98
TRPS1-201ENST00000220888 OR11H2Q8NH07 326 aa8.91□□□□□ -0.98
TRPS1-201ENST00000220888 MRPS18CQ9Y3D5 142 aaKnown RBP8.91□□□□□ -0.98
TRPS1-201ENST00000220888 FABP2P12104 132 aa8.9□□□□□ -0.98
TRPS1-201ENST00000220888 CD59P13987 128 aa8.9□□□□□ -0.98
TRPS1-201ENST00000220888 ZNF345Q14585 488 aa8.9□□□□□ -0.98
TRPS1-201ENST00000220888 CTHRC1Q96CG8 243 aa8.9□□□□□ -0.98
TRPS1-201ENST00000220888 IMMP1LQ96LU5 166 aa8.9□□□□□ -0.98
TRPS1-201ENST00000220888 CHCHD5Q9BSY4 110 aa8.9□□□□□ -0.98
TRPS1-201ENST00000220888 REPIN1Q9BWE0 567 aaKnown RBP8.9□□□□□ -0.98
TRPS1-201ENST00000220888 RRHO14718 337 aa8.9□□□□□ -0.98
TRPS1-201ENST00000220888 PRSS23O95084 383 aa8.9□□□□□ -0.98
TRPS1-201ENST00000220888 RHOGP84095 191 aa8.9□□□□□ -0.98
TRPS1-201ENST00000220888 SRSF7Q16629 238 aaKnown RBP eCLIP8.9□□□□□ -0.98
TRPS1-201ENST00000220888 J3QKU1 62 aa8.9□□□□□ -0.98
TRPS1-201ENST00000220888 HSPB1P04792 205 aaKnown RBP8.9□□□□□ -0.98
TRPS1-201ENST00000220888 HOXA5P20719 270 aa8.9□□□□□ -0.98
TRPS1-201ENST00000220888 ASCL4Q6XD76 172 aa8.9□□□□□ -0.98
TRPS1-201ENST00000220888 STPG2Q8N412 459 aa8.9□□□□□ -0.98
TRPS1-201ENST00000220888 GLMPQ8WWB7 406 aa8.9□□□□□ -0.98
TRPS1-201ENST00000220888 TMEM133Q9H2Q1 129 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms