RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 RNF24Q9Y225 148 aa16.7■□□□□ 0.26
PPP1R3F-201ENST00000055335 LOXL2Q9Y4K0 774 aa16.7■□□□□ 0.26
PPP1R3F-201ENST00000055335 HELTA6NFD8 242 aa16.69■□□□□ 0.26
PPP1R3F-201ENST00000055335 PATE3B3GLJ2 98 aa16.69■□□□□ 0.26
PPP1R3F-201ENST00000055335 HYPMO75409 117 aa16.69■□□□□ 0.26
PPP1R3F-201ENST00000055335 CXCL12P48061 93 aa16.69■□□□□ 0.26
PPP1R3F-201ENST00000055335 C1orf174Q8IYL3 243 aa16.69■□□□□ 0.26
PPP1R3F-201ENST00000055335 PLEKHA3Q9HB20 300 aa16.69■□□□□ 0.26
PPP1R3F-201ENST00000055335 Q56UQ5 140 aa16.69■□□□□ 0.26
PPP1R3F-201ENST00000055335 RPL39P5Q59GN2 51 aa16.69■□□□□ 0.26
PPP1R3F-201ENST00000055335 Q6ZR03 302 aa16.69■□□□□ 0.26
PPP1R3F-201ENST00000055335 SLC25A40Q8TBP6 338 aa16.69■□□□□ 0.26
PPP1R3F-201ENST00000055335 LEAP2Q969E1 77 aa16.69■□□□□ 0.26
PPP1R3F-201ENST00000055335 ASCL3Q9NQ33 180 aa16.69■□□□□ 0.26
PPP1R3F-201ENST00000055335 UQCR10Q9UDW1 63 aa16.69■□□□□ 0.26
PPP1R3F-201ENST00000055335 TIMM8BQ9Y5J9 83 aaPredicted RBP16.69■□□□□ 0.26
PPP1R3F-201ENST00000055335 DPRXA6NFQ7 191 aa16.68■□□□□ 0.26
PPP1R3F-201ENST00000055335 PPP1R32Q7Z5V6 425 aa16.68■□□□□ 0.26
PPP1R3F-201ENST00000055335 ST6GALNAC6Q969X2 333 aa16.68■□□□□ 0.26
PPP1R3F-201ENST00000055335 HCFC1P51610 2035 aa16.68■□□□□ 0.26
PPP1R3F-201ENST00000055335 ZFHX4Q86UP3 3567 aa16.68■□□□□ 0.26
PPP1R3F-201ENST00000055335 CCL25O15444 150 aa16.68■□□□□ 0.26
PPP1R3F-201ENST00000055335 C3orf79P0CE67 100 aa16.68■□□□□ 0.26
PPP1R3F-201ENST00000055335 ZNF83P51522 516 aa16.68■□□□□ 0.26
PPP1R3F-201ENST00000055335 MIR17HGQ75NE6 70 aa16.68■□□□□ 0.26
PPP1R3F-201ENST00000055335 STPG3Q8N7X2 389 aa16.68■□□□□ 0.26
PPP1R3F-201ENST00000055335 CEP250Q9BV73 2442 aa16.68■□□□□ 0.26
PPP1R3F-201ENST00000055335 MYOD1P15172 320 aa16.68■□□□□ 0.26
PPP1R3F-201ENST00000055335 FOXF2Q12947 444 aa16.68■□□□□ 0.26
PPP1R3F-201ENST00000055335 EFNB3Q15768 340 aa16.68■□□□□ 0.26
PPP1R3F-201ENST00000055335 PCED1AQ9H1Q7 454 aa16.68■□□□□ 0.26
PPP1R3F-201ENST00000055335 ZNF576Q9H609 170 aa16.68■□□□□ 0.26
PPP1R3F-201ENST00000055335 CLCF1Q9UBD9 225 aa16.68■□□□□ 0.26
PPP1R3F-201ENST00000055335 TPRP12270 2363 aaKnown RBP16.68■□□□□ 0.26
PPP1R3F-201ENST00000055335 MED13Q9UHV7 2174 aa16.68■□□□□ 0.26
PPP1R3F-201ENST00000055335 A0A1W2PS18 150 aa16.67■□□□□ 0.26
PPP1R3F-201ENST00000055335 OOEPA6NGQ2 149 aa16.67■□□□□ 0.26
PPP1R3F-201ENST00000055335 ERVK-16P61578 105 aa16.67■□□□□ 0.26
PPP1R3F-201ENST00000055335 OR1C1Q15619 314 aa16.67■□□□□ 0.26
PPP1R3F-201ENST00000055335 TP73-AS1Q9UF72 201 aa16.67■□□□□ 0.26
PPP1R3F-201ENST00000055335 RPP30P78346 268 aaKnown RBP16.67■□□□□ 0.26
PPP1R3F-201ENST00000055335 TMEM45BQ96B21 275 aa16.67■□□□□ 0.26
PPP1R3F-201ENST00000055335 ZNF318Q5VUA4 2279 aa16.67■□□□□ 0.26
PPP1R3F-201ENST00000055335 TBC1D28Q2M2D7 210 aa16.67■□□□□ 0.26
PPP1R3F-201ENST00000055335 DEFB127Q9H1M4 99 aa16.67■□□□□ 0.26
PPP1R3F-201ENST00000055335 TRIOBPQ9H2D6 2365 aa16.66■□□□□ 0.26
PPP1R3F-201ENST00000055335 LYZL6O75951 148 aa16.66■□□□□ 0.26
PPP1R3F-201ENST00000055335 NDUFB8O95169 186 aa16.66■□□□□ 0.26
PPP1R3F-201ENST00000055335 P0C879 139 aa16.66■□□□□ 0.26
PPP1R3F-201ENST00000055335 FABP6P51161 128 aa16.66■□□□□ 0.26
PPP1R3F-201ENST00000055335 CLDN18P56856 261 aa16.66■□□□□ 0.26
PPP1R3F-201ENST00000055335 Q8IYB0 196 aa16.66■□□□□ 0.26
PPP1R3F-201ENST00000055335 GCNT2Q8N0V5 402 aa16.66■□□□□ 0.26
PPP1R3F-201ENST00000055335 COQ2Q96H96 371 aa16.66■□□□□ 0.26
PPP1R3F-201ENST00000055335 OPRK1P41145 380 aa16.66■□□□□ 0.26
PPP1R3F-201ENST00000055335 TIGITQ495A1 244 aa16.66■□□□□ 0.26
PPP1R3F-201ENST00000055335 SLC35D1Q9NTN3 355 aa16.66■□□□□ 0.26
PPP1R3F-201ENST00000055335 HEATR1Q9H583 2144 aaKnown RBP16.66■□□□□ 0.26
PPP1R3F-201ENST00000055335 ADAMTS20P59510 1910 aa16.66■□□□□ 0.26
PPP1R3F-201ENST00000055335 IGLC2P0DOY2 106 aa16.66■□□□□ 0.26
PPP1R3F-201ENST00000055335 IGLC3P0DOY3 106 aa16.66■□□□□ 0.26
PPP1R3F-201ENST00000055335 IGFBP2P18065 325 aa16.66■□□□□ 0.26
PPP1R3F-201ENST00000055335 RHOBP62745 196 aa16.66■□□□□ 0.26
PPP1R3F-201ENST00000055335 PRR27Q6MZM9 219 aa16.66■□□□□ 0.26
PPP1R3F-201ENST00000055335 MOB3BQ86TA1 216 aa16.66■□□□□ 0.26
PPP1R3F-201ENST00000055335 ZBTB34Q8NCN2 500 aa16.66■□□□□ 0.26
PPP1R3F-201ENST00000055335 AHRRA9YTQ3 701 aa16.65■□□□□ 0.26
PPP1R3F-201ENST00000055335 VWC2Q2TAL6 325 aa16.65■□□□□ 0.26
PPP1R3F-201ENST00000055335 B4GALT7Q9UBV7 327 aa16.65■□□□□ 0.26
PPP1R3F-201ENST00000055335 MT-CO2P00403 227 aa16.65■□□□□ 0.26
PPP1R3F-201ENST00000055335 ARG2P78540 354 aa16.65■□□□□ 0.26
PPP1R3F-201ENST00000055335 ABHD17BQ5VST6 288 aa16.65■□□□□ 0.26
PPP1R3F-201ENST00000055335 V9GYV3 84 aa16.65■□□□□ 0.26
PPP1R3F-201ENST00000055335 LINC00470Q9BZP3 86 aa16.64■□□□□ 0.25
PPP1R3F-201ENST00000055335 CEP192Q8TEP8 1941 aa16.64■□□□□ 0.25
PPP1R3F-201ENST00000055335 LOC400499M0QZD8 3231 aa16.64■□□□□ 0.25
PPP1R3F-201ENST00000055335 LOC102724200A0A096LPH7 203 aaPredicted RBP16.64■□□□□ 0.25
PPP1R3F-201ENST00000055335 GPR6P46095 362 aaPredicted RBP16.64■□□□□ 0.25
PPP1R3F-201ENST00000055335 CAMPP49913 170 aa16.64■□□□□ 0.25
PPP1R3F-201ENST00000055335 RELBQ01201 579 aa16.64■□□□□ 0.25
PPP1R3F-201ENST00000055335 ZNF146Q15072 292 aa16.64■□□□□ 0.25
PPP1R3F-201ENST00000055335 NRN1LQ496H8 165 aa16.64■□□□□ 0.25
PPP1R3F-201ENST00000055335 RAB1CQ92928 201 aa16.64■□□□□ 0.25
PPP1R3F-201ENST00000055335 KCNS1Q96KK3 526 aa16.64■□□□□ 0.25
PPP1R3F-201ENST00000055335 ZNF324O75467 553 aaPredicted RBP16.64■□□□□ 0.25
PPP1R3F-201ENST00000055335 HSBP1O75506 76 aa16.64■□□□□ 0.25
PPP1R3F-201ENST00000055335 CER1O95813 267 aa16.64■□□□□ 0.25
PPP1R3F-201ENST00000055335 RPL19P84098 196 aaKnown RBP16.64■□□□□ 0.25
PPP1R3F-201ENST00000055335 LEMD1Q68G75 181 aa16.64■□□□□ 0.25
PPP1R3F-201ENST00000055335 SPEM1Q8N4L4 309 aa16.64■□□□□ 0.25
PPP1R3F-201ENST00000055335 NPVFQ9HCQ7 196 aa16.64■□□□□ 0.25
PPP1R3F-201ENST00000055335 SLC45A2Q9UMX9 530 aa16.64■□□□□ 0.25
PPP1R3F-201ENST00000055335 SPINT2O43291 252 aa16.63■□□□□ 0.25
PPP1R3F-201ENST00000055335 ERVK11-1P61568 191 aa16.63■□□□□ 0.25
PPP1R3F-201ENST00000055335 VAMP3Q15836 100 aa16.63■□□□□ 0.25
PPP1R3F-201ENST00000055335 ZNF718Q3SXZ3 478 aa16.63■□□□□ 0.25
PPP1R3F-201ENST00000055335 HES3Q5TGS1 186 aa16.63■□□□□ 0.25
PPP1R3F-201ENST00000055335 TEPPQ6URK8 271 aa16.63■□□□□ 0.25
PPP1R3F-201ENST00000055335 GMPPAQ96IJ6 420 aaPredicted RBP16.63■□□□□ 0.25
PPP1R3F-201ENST00000055335 SGK494Q96LW2 274 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms