RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 C19orf35Q6ZS72 473 aa11.93□□□□□ -0.5
ERCC1-201ENST00000013807 CADM3Q8N126 398 aa11.93□□□□□ -0.5
ERCC1-201ENST00000013807 GVQW1Q8N7I0 195 aa11.93□□□□□ -0.5
ERCC1-201ENST00000013807 OR13F1Q8NGS4 319 aa11.93□□□□□ -0.5
ERCC1-201ENST00000013807 DYNLRB2Q8TF09 96 aa11.93□□□□□ -0.5
ERCC1-201ENST00000013807 EEF1AKMT3Q96AZ1 226 aa11.93□□□□□ -0.5
ERCC1-201ENST00000013807 CXorf58Q96LI9 332 aa11.93□□□□□ -0.5
ERCC1-201ENST00000013807 GPHA2Q96T91 129 aa11.93□□□□□ -0.5
ERCC1-201ENST00000013807 AUNIPQ9H7T9 357 aa11.93□□□□□ -0.5
ERCC1-201ENST00000013807 TRAV18A0A075B6X5 111 aa11.92□□□□□ -0.5
ERCC1-201ENST00000013807 EDN2P20800 178 aa11.92□□□□□ -0.5
ERCC1-201ENST00000013807 CLEC19AQ6UXS0 136 aa11.92□□□□□ -0.5
ERCC1-201ENST00000013807 SPAG16Q8N0X2 631 aa11.92□□□□□ -0.5
ERCC1-201ENST00000013807 DEFB125Q8N687 156 aa11.92□□□□□ -0.5
ERCC1-201ENST00000013807 OR5AP2Q8NGF4 316 aa11.92□□□□□ -0.5
ERCC1-201ENST00000013807 SECTM1Q8WVN6 248 aa11.92□□□□□ -0.5
ERCC1-201ENST00000013807 Q9H521 79 aa11.92□□□□□ -0.5
ERCC1-201ENST00000013807 PLEKHA2Q9HB19 425 aa11.92□□□□□ -0.5
ERCC1-201ENST00000013807 GAR1Q9NY12 217 aaKnown RBP11.92□□□□□ -0.5
ERCC1-201ENST00000013807 IGLC7A0M8Q6 106 aa11.91□□□□□ -0.5
ERCC1-201ENST00000013807 UPK2O00526 184 aa11.91□□□□□ -0.5
ERCC1-201ENST00000013807 ATP6V1G2O95670 118 aa11.91□□□□□ -0.5
ERCC1-201ENST00000013807 CLEC2LP0C7M8 214 aa11.91□□□□□ -0.5
ERCC1-201ENST00000013807 NQO2P16083 231 aa11.91□□□□□ -0.5
ERCC1-201ENST00000013807 CBX5P45973 191 aa11.91□□□□□ -0.5
ERCC1-201ENST00000013807 ELLP55199 621 aaPredicted RBP11.91□□□□□ -0.5
ERCC1-201ENST00000013807 CATR1Q13166 79 aa11.91□□□□□ -0.5
ERCC1-201ENST00000013807 SSX9Q7RTT3 188 aa11.91□□□□□ -0.5
ERCC1-201ENST00000013807 CD300LFQ8TDQ1 290 aa11.91□□□□□ -0.5
ERCC1-201ENST00000013807 MARC2Q969Z3 335 aa11.91□□□□□ -0.5
ERCC1-201ENST00000013807 WDR89Q96FK6 387 aaPredicted RBP11.91□□□□□ -0.5
ERCC1-201ENST00000013807 RNF167Q9H6Y7 350 aa11.91□□□□□ -0.5
ERCC1-201ENST00000013807 DIABLOQ9NR28 239 aa11.91□□□□□ -0.5
ERCC1-201ENST00000013807 TRAV25A0A0B4J276 109 aa11.9□□□□□ -0.5
ERCC1-201ENST00000013807 TNFSF12O43508 249 aa11.9□□□□□ -0.5
ERCC1-201ENST00000013807 CLEC3BP05452 202 aa11.9□□□□□ -0.5
ERCC1-201ENST00000013807 PTHLHP12272 177 aa11.9□□□□□ -0.5
ERCC1-201ENST00000013807 PTBP1P26599 531 aaKnown RBP eCLIP11.9□□□□□ -0.5
ERCC1-201ENST00000013807 MXD1Q05195 221 aa11.9□□□□□ -0.5
ERCC1-201ENST00000013807 IDNKQ5T6J7 187 aa11.9□□□□□ -0.5
ERCC1-201ENST00000013807 ZNF57Q68EA5 555 aaPredicted RBP11.9□□□□□ -0.5
ERCC1-201ENST00000013807 THOC7Q6I9Y2 204 aaKnown RBP11.9□□□□□ -0.5
ERCC1-201ENST00000013807 DHRS11Q6UWP2 260 aa11.9□□□□□ -0.5
ERCC1-201ENST00000013807 SLC16A13Q7RTY0 426 aa11.9□□□□□ -0.5
ERCC1-201ENST00000013807 TMEM61Q8N0U2 210 aa11.9□□□□□ -0.5
ERCC1-201ENST00000013807 ZNF502Q8TBZ5 544 aa11.9□□□□□ -0.5
ERCC1-201ENST00000013807 BORCS5Q969J3 196 aa11.9□□□□□ -0.5
ERCC1-201ENST00000013807 ATP6V0BQ99437 205 aa11.9□□□□□ -0.5
ERCC1-201ENST00000013807 SLC5A7Q9GZV3 580 aa11.9□□□□□ -0.5
ERCC1-201ENST00000013807 SRD5A3Q9H8P0 318 aa11.9□□□□□ -0.5
ERCC1-201ENST00000013807 RETNQ9HD89 108 aa11.9□□□□□ -0.5
ERCC1-201ENST00000013807 THYN1Q9P016 225 aa11.9□□□□□ -0.5
ERCC1-201ENST00000013807 MLXQ9UH92 298 aa11.9□□□□□ -0.5
ERCC1-201ENST00000013807 MFSD2BA6NFX1 497 aa11.89□□□□□ -0.51
ERCC1-201ENST00000013807 SULT1C2O00338 296 aa11.89□□□□□ -0.51
ERCC1-201ENST00000013807 XRCC3O43542 346 aa11.89□□□□□ -0.51
ERCC1-201ENST00000013807 IGHV3-23P01764 117 aa11.89□□□□□ -0.51
ERCC1-201ENST00000013807 DEFA4P12838 97 aa11.89□□□□□ -0.51
ERCC1-201ENST00000013807 MYOD1P15172 320 aa11.89□□□□□ -0.51
ERCC1-201ENST00000013807 GNRHRP30968 328 aa11.89□□□□□ -0.51
ERCC1-201ENST00000013807 GUCA2BQ16661 112 aa11.89□□□□□ -0.51
ERCC1-201ENST00000013807 ANKRD55Q3KP44 614 aa11.89□□□□□ -0.51
ERCC1-201ENST00000013807 ZNF818PQ6ZRF7 136 aa11.89□□□□□ -0.51
ERCC1-201ENST00000013807 HSD17B13Q7Z5P4 300 aaPredicted RBP11.89□□□□□ -0.51
ERCC1-201ENST00000013807 UXS1Q8NBZ7 420 aa11.89□□□□□ -0.51
ERCC1-201ENST00000013807 VN1R17PQ8TDU5 208 aa11.89□□□□□ -0.51
ERCC1-201ENST00000013807 ZNF436Q9C0F3 470 aaPredicted RBP11.89□□□□□ -0.51
ERCC1-201ENST00000013807 WFDC10AQ9H1F0 79 aa11.89□□□□□ -0.51
ERCC1-201ENST00000013807 HRASLSQ9HDD0 168 aa11.89□□□□□ -0.51
ERCC1-201ENST00000013807 COMMD9Q9P000 198 aa11.89□□□□□ -0.51
ERCC1-201ENST00000013807 MRPL27Q9P0M9 148 aaKnown RBP11.89□□□□□ -0.51
ERCC1-201ENST00000013807 ANAPC10Q9UM13 185 aa11.89□□□□□ -0.51
ERCC1-201ENST00000013807 TRAV3A0A0B4J244 114 aa11.88□□□□□ -0.51
ERCC1-201ENST00000013807 REG1AP05451 166 aa11.88□□□□□ -0.51
ERCC1-201ENST00000013807 CROCCP3Q8IVE0 287 aa11.88□□□□□ -0.51
ERCC1-201ENST00000013807 CACNG8Q8WXS5 425 aa11.88□□□□□ -0.51
ERCC1-201ENST00000013807 COMMD5Q9GZQ3 224 aa11.88□□□□□ -0.51
ERCC1-201ENST00000013807 TMEM140Q9NV12 185 aa11.88□□□□□ -0.51
ERCC1-201ENST00000013807 LOC100506127A0A0U1RQW1 187 aa11.87□□□□□ -0.51
ERCC1-201ENST00000013807 ZNF320A2RRD8 509 aa11.87□□□□□ -0.51
ERCC1-201ENST00000013807 SERPINE2P07093 398 aa11.87□□□□□ -0.51
ERCC1-201ENST00000013807 NAT1P18440 290 aa11.87□□□□□ -0.51
ERCC1-201ENST00000013807 UNQ9165/PRO28630Q6UXU0 137 aa11.87□□□□□ -0.51
ERCC1-201ENST00000013807 QTRT1Q9BXR0 403 aaKnown RBP11.87□□□□□ -0.51
ERCC1-201ENST00000013807 C5orf66Q9H5L9 145 aa11.87□□□□□ -0.51
ERCC1-201ENST00000013807 S4R3C0 116 aa11.87□□□□□ -0.51
ERCC1-201ENST00000013807 F2RP25116 425 aa11.86□□□□□ -0.51
ERCC1-201ENST00000013807 KCTD21Q4G0X4 260 aa11.86□□□□□ -0.51
ERCC1-201ENST00000013807 TM4SF20Q53R12 229 aa11.86□□□□□ -0.51
ERCC1-201ENST00000013807 GDPD1Q8N9F7 314 aa11.86□□□□□ -0.51
ERCC1-201ENST00000013807 OR52B4Q8NGK2 314 aa11.86□□□□□ -0.51
ERCC1-201ENST00000013807 MOB3AQ96BX8 217 aa11.86□□□□□ -0.51
ERCC1-201ENST00000013807 S100A16Q96FQ6 103 aaKnown RBP11.86□□□□□ -0.51
ERCC1-201ENST00000013807 FAM110AQ9BQ89 295 aa11.86□□□□□ -0.51
ERCC1-201ENST00000013807 UFC1Q9Y3C8 167 aa11.86□□□□□ -0.51
ERCC1-201ENST00000013807 EPPK1P58107 5090 aaKnown RBP11.85□□□□□ -0.51
ERCC1-201ENST00000013807 TEX50A0A1B0GTY4 177 aa11.85□□□□□ -0.51
ERCC1-201ENST00000013807 CYB5BO43169 146 aa11.85□□□□□ -0.51
ERCC1-201ENST00000013807 S1PR2O95136 353 aa11.85□□□□□ -0.51
ERCC1-201ENST00000013807 TRAPPC2P0DI81 140 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms