RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 ACTL6BO94805 426 aa13.41□□□□□ -0.26
PHGDH-227ENST00000641811 S1PR2O95136 353 aa13.41□□□□□ -0.26
PHGDH-227ENST00000641811 MYOD1P15172 320 aa13.41□□□□□ -0.26
PHGDH-227ENST00000641811 RPA2P15927 270 aa13.41□□□□□ -0.26
PHGDH-227ENST00000641811 CD40LGP29965 261 aa13.41□□□□□ -0.26
PHGDH-227ENST00000641811 FHL3Q13643 280 aa13.41□□□□□ -0.26
PHGDH-227ENST00000641811 IL18Q14116 193 aa13.41□□□□□ -0.26
PHGDH-227ENST00000641811 PDLIM3Q53GG5 364 aaPredicted RBP13.41□□□□□ -0.26
PHGDH-227ENST00000641811 RNASE10Q5GAN6 216 aaKnown RBP13.41□□□□□ -0.26
PHGDH-227ENST00000641811 OR4A47Q6IF82 309 aa13.41□□□□□ -0.26
PHGDH-227ENST00000641811 OR4D10Q8NGI6 311 aa13.41□□□□□ -0.26
PHGDH-227ENST00000641811 MCFD2Q8NI22 146 aa13.41□□□□□ -0.26
PHGDH-227ENST00000641811 VSTM2AQ8TAG5 236 aa13.41□□□□□ -0.26
PHGDH-227ENST00000641811 RBM38Q9H0Z9 239 aaKnown RBP13.41□□□□□ -0.26
PHGDH-227ENST00000641811 COA4Q9NYJ1 87 aa13.41□□□□□ -0.26
PHGDH-227ENST00000641811 HMX3A6NHT5 357 aa13.4□□□□□ -0.26
PHGDH-227ENST00000641811 E7EUB6 86 aa13.4□□□□□ -0.26
PHGDH-227ENST00000641811 MPPED1O15442 326 aa13.4□□□□□ -0.26
PHGDH-227ENST00000641811 CREBL2O60519 120 aaPredicted RBP13.4□□□□□ -0.26
PHGDH-227ENST00000641811 HPRT1P00492 218 aa13.4□□□□□ -0.26
PHGDH-227ENST00000641811 IFNA6P05013 189 aa13.4□□□□□ -0.26
PHGDH-227ENST00000641811 HOXD3P31249 432 aaPredicted RBP13.4□□□□□ -0.26
PHGDH-227ENST00000641811 TNFSF8P32971 234 aa13.4□□□□□ -0.26
PHGDH-227ENST00000641811 CMTM1Q8IZ96 169 aa13.4□□□□□ -0.26
PHGDH-227ENST00000641811 TMEM68Q96MH6 324 aa13.4□□□□□ -0.26
PHGDH-227ENST00000641811 RSRP1Q9BUV0 290 aa13.4□□□□□ -0.26
PHGDH-227ENST00000641811 NXF2Q9GZY0 626 aaKnown RBP13.4□□□□□ -0.26
PHGDH-227ENST00000641811 SLA2Q9H6Q3 261 aa13.4□□□□□ -0.26
PHGDH-227ENST00000641811 TRAV3A0A0B4J244 114 aa13.39□□□□□ -0.27
PHGDH-227ENST00000641811 A0A1B0GW64 132 aa13.39□□□□□ -0.27
PHGDH-227ENST00000641811 RBMXL2O75526 392 aaKnown RBP13.39□□□□□ -0.27
PHGDH-227ENST00000641811 IL6RP08887 468 aaPredicted RBP13.39□□□□□ -0.27
PHGDH-227ENST00000641811 LGALS1P09382 135 aaKnown RBP13.39□□□□□ -0.27
PHGDH-227ENST00000641811 F2RP25116 425 aa13.39□□□□□ -0.27
PHGDH-227ENST00000641811 LPAR6P43657 344 aa13.39□□□□□ -0.27
PHGDH-227ENST00000641811 TAS2R31P59538 309 aa13.39□□□□□ -0.27
PHGDH-227ENST00000641811 ZNF616Q08AN1 781 aa13.39□□□□□ -0.27
PHGDH-227ENST00000641811 TMEM229BQ8NBD8 167 aa13.39□□□□□ -0.27
PHGDH-227ENST00000641811 ADAD2Q8NCV1 583 aaKnown RBP13.39□□□□□ -0.27
PHGDH-227ENST00000641811 CD300LFQ8TDQ1 290 aa13.39□□□□□ -0.27
PHGDH-227ENST00000641811 SMIM4Q8WVI0 70 aa13.39□□□□□ -0.27
PHGDH-227ENST00000641811 DGCR14Q96DF8 476 aaKnown RBP13.39□□□□□ -0.27
PHGDH-227ENST00000641811 HRASLSQ9HDD0 168 aa13.39□□□□□ -0.27
PHGDH-227ENST00000641811 IGHV4OR15-8A0A075B7B6 117 aa13.38□□□□□ -0.27
PHGDH-227ENST00000641811 A0A087WW49 117 aa13.38□□□□□ -0.27
PHGDH-227ENST00000641811 TEX22C9J3V5 150 aa13.38□□□□□ -0.27
PHGDH-227ENST00000641811 H3BUA1 57 aa13.38□□□□□ -0.27
PHGDH-227ENST00000641811 DUS4LO95620 317 aaKnown RBP13.38□□□□□ -0.27
PHGDH-227ENST00000641811 PRH1P02810 166 aa13.38□□□□□ -0.27
PHGDH-227ENST00000641811 CD74P04233 296 aa13.38□□□□□ -0.27
PHGDH-227ENST00000641811 OR9G9P0C7N8 305 aa13.38□□□□□ -0.27
PHGDH-227ENST00000641811 NQO2P16083 231 aa13.38□□□□□ -0.27
PHGDH-227ENST00000641811 PI3P19957 117 aa13.38□□□□□ -0.27
PHGDH-227ENST00000641811 RPL27AP46776 148 aaKnown RBP13.38□□□□□ -0.27
PHGDH-227ENST00000641811 UCP3P55916 312 aa13.38□□□□□ -0.27
PHGDH-227ENST00000641811 KRTAP10-11P60412 298 aa13.38□□□□□ -0.27
PHGDH-227ENST00000641811 MRPS10P82664 201 aaKnown RBP13.38□□□□□ -0.27
PHGDH-227ENST00000641811 ZNF585BQ52M93 769 aa13.38□□□□□ -0.27
PHGDH-227ENST00000641811 LPCAT3Q6P1A2 487 aa13.38□□□□□ -0.27
PHGDH-227ENST00000641811 C19orf35Q6ZS72 473 aa13.38□□□□□ -0.27
PHGDH-227ENST00000641811 DPF1Q92782 380 aa13.38□□□□□ -0.27
PHGDH-227ENST00000641811 FYTTD1Q96QD9 318 aaKnown RBP13.38□□□□□ -0.27
PHGDH-227ENST00000641811 SPIN2AQ99865 258 aa13.38□□□□□ -0.27
PHGDH-227ENST00000641811 SPIN2BQ9BPZ2 258 aa13.38□□□□□ -0.27
PHGDH-227ENST00000641811 PLEKHA2Q9HB19 425 aa13.38□□□□□ -0.27
PHGDH-227ENST00000641811 BET1LQ9NYM9 111 aa13.38□□□□□ -0.27
PHGDH-227ENST00000641811 RSL24D1Q9UHA3 163 aaKnown RBP13.38□□□□□ -0.27
PHGDH-227ENST00000641811 UPK2O00526 184 aa13.37□□□□□ -0.27
PHGDH-227ENST00000641811 RAB3DO95716 219 aa13.37□□□□□ -0.27
PHGDH-227ENST00000641811 OR8U8P0C7N1 319 aa13.37□□□□□ -0.27
PHGDH-227ENST00000641811 PGAM2P15259 253 aa13.37□□□□□ -0.27
PHGDH-227ENST00000641811 HLA-GP17693 338 aa13.37□□□□□ -0.27
PHGDH-227ENST00000641811 TBPP20226 339 aa13.37□□□□□ -0.27
PHGDH-227ENST00000641811 MAS1LP35410 378 aa13.37□□□□□ -0.27
PHGDH-227ENST00000641811 SLURP1P55000 103 aa13.37□□□□□ -0.27
PHGDH-227ENST00000641811 TAS2R19P59542 299 aa13.37□□□□□ -0.27
PHGDH-227ENST00000641811 RPL8P62917 257 aaKnown RBP13.37□□□□□ -0.27
PHGDH-227ENST00000641811 POU2AF1Q16633 256 aa13.37□□□□□ -0.27
PHGDH-227ENST00000641811 FAAP20Q6NZ36 180 aa13.37□□□□□ -0.27
PHGDH-227ENST00000641811 STEAP1BQ6NZ63 245 aa13.37□□□□□ -0.27
PHGDH-227ENST00000641811 TBC1D26Q86UD7 250 aa13.37□□□□□ -0.27
PHGDH-227ENST00000641811 LHFPL1Q86WI0 220 aa13.37□□□□□ -0.27
PHGDH-227ENST00000641811 SLC38A6Q8IZM9 456 aa13.37□□□□□ -0.27
PHGDH-227ENST00000641811 ARRDC1Q8N5I2 433 aa13.37□□□□□ -0.27
PHGDH-227ENST00000641811 DMBX1Q8NFW5 382 aa13.37□□□□□ -0.27
PHGDH-227ENST00000641811 DCUN1D4Q92564 292 aa13.37□□□□□ -0.27
PHGDH-227ENST00000641811 SOSTQ9BQB4 213 aa13.37□□□□□ -0.27
PHGDH-227ENST00000641811 AIFM2Q9BRQ8 373 aa13.37□□□□□ -0.27
PHGDH-227ENST00000641811 MCRIP2Q9BUT9 160 aaKnown RBP13.37□□□□□ -0.27
PHGDH-227ENST00000641811 TMEM140Q9NV12 185 aa13.37□□□□□ -0.27
PHGDH-227ENST00000641811 AURKAIP1Q9NWT8 199 aaPredicted RBP13.37□□□□□ -0.27
PHGDH-227ENST00000641811 COMMD9Q9P000 198 aa13.37□□□□□ -0.27
PHGDH-227ENST00000641811 C13orf42A0A1B0GVH6 325 aa13.36□□□□□ -0.27
PHGDH-227ENST00000641811 ANKRD34BA5PLL1 514 aa13.36□□□□□ -0.27
PHGDH-227ENST00000641811 CGB1A6NKQ9 187 aa13.36□□□□□ -0.27
PHGDH-227ENST00000641811 LINC01619G3V211 115 aa13.36□□□□□ -0.27
PHGDH-227ENST00000641811 CTDSPLO15194 276 aa13.36□□□□□ -0.27
PHGDH-227ENST00000641811 KRASP01116 189 aa13.36□□□□□ -0.27
PHGDH-227ENST00000641811 PPP5CP53041 499 aa13.36□□□□□ -0.27
PHGDH-227ENST00000641811 ZNF45Q02386 682 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms