RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 C1orf159Q96HA4 380 aa13.89□□□□□ -0.19
PHGDH-223ENST00000641597 CEP295Q9C0D2 2601 aa13.89□□□□□ -0.19
PHGDH-223ENST00000641597 TMEM140Q9NV12 185 aa13.89□□□□□ -0.19
PHGDH-223ENST00000641597 ZGRF1Q86YA3 2104 aa13.89□□□□□ -0.19
PHGDH-223ENST00000641597 H7BYZ3 331 aa13.88□□□□□ -0.19
PHGDH-223ENST00000641597 MMP23AO75900 390 aa13.88□□□□□ -0.19
PHGDH-223ENST00000641597 GNB1P62873 340 aa13.88□□□□□ -0.19
PHGDH-223ENST00000641597 GNB2P62879 340 aa13.88□□□□□ -0.19
PHGDH-223ENST00000641597 ZCCHC24Q8N2G6 241 aaKnown RBP13.88□□□□□ -0.19
PHGDH-223ENST00000641597 OR10A7Q8NGE5 316 aa13.88□□□□□ -0.19
PHGDH-223ENST00000641597 WDR83OSQ9Y284 106 aa13.88□□□□□ -0.19
PHGDH-223ENST00000641597 FAM215AQ9Y5M1 114 aa13.88□□□□□ -0.19
PHGDH-223ENST00000641597 RAI1Q7Z5J4 1906 aaPredicted RBP13.88□□□□□ -0.19
PHGDH-223ENST00000641597 LRBAP50851 2863 aa13.88□□□□□ -0.19
PHGDH-223ENST00000641597 NDUFB4O95168 129 aa13.88□□□□□ -0.19
PHGDH-223ENST00000641597 ADH4P08319 380 aa13.88□□□□□ -0.19
PHGDH-223ENST00000641597 GNG10P50151 68 aa13.88□□□□□ -0.19
PHGDH-223ENST00000641597 RELBQ01201 579 aa13.88□□□□□ -0.19
PHGDH-223ENST00000641597 RHOVQ96L33 236 aa13.88□□□□□ -0.19
PHGDH-223ENST00000641597 WFIKKN1Q96NZ8 548 aa13.88□□□□□ -0.19
PHGDH-223ENST00000641597 CIB3Q96Q77 187 aaPredicted RBP13.88□□□□□ -0.19
PHGDH-223ENST00000641597 MGST2Q99735 147 aa13.88□□□□□ -0.19
PHGDH-223ENST00000641597 PTPRZ1P23471 2315 aaPredicted RBP13.88□□□□□ -0.19
PHGDH-223ENST00000641597 CSMD1Q96PZ7 3565 aa13.87□□□□□ -0.19
PHGDH-223ENST00000641597 GFRA3O60609 400 aa13.87□□□□□ -0.19
PHGDH-223ENST00000641597 GAMTQ14353 236 aa13.87□□□□□ -0.19
PHGDH-223ENST00000641597 CT45A1Q5HYN5 189 aa13.87□□□□□ -0.19
PHGDH-223ENST00000641597 SPATA31B1PQ5VZV4 182 aa13.87□□□□□ -0.19
PHGDH-223ENST00000641597 UNQ6494/PRO21346Q6UXR6 183 aa13.87□□□□□ -0.19
PHGDH-223ENST00000641597 OR13D1Q8NGV5 346 aa13.87□□□□□ -0.19
PHGDH-223ENST00000641597 CT45A3Q8NHU0 189 aa13.87□□□□□ -0.19
PHGDH-223ENST00000641597 HIST1H2BLQ99880 126 aa13.87□□□□□ -0.19
PHGDH-223ENST00000641597 HINT2Q9BX68 163 aa13.87□□□□□ -0.19
PHGDH-223ENST00000641597 CALYQ9NYX4 217 aa13.87□□□□□ -0.19
PHGDH-223ENST00000641597 WASF3Q9UPY6 502 aa13.87□□□□□ -0.19
PHGDH-223ENST00000641597 C1QTNF9P0C862 333 aa13.87□□□□□ -0.19
PHGDH-223ENST00000641597 C17orf58Q2M2W7 97 aa13.87□□□□□ -0.19
PHGDH-223ENST00000641597 MOB3BQ86TA1 216 aa13.87□□□□□ -0.19
PHGDH-223ENST00000641597 TMEM37Q8WXS4 190 aa13.87□□□□□ -0.19
PHGDH-223ENST00000641597 PRDM13Q9H4Q3 707 aa13.87□□□□□ -0.19
PHGDH-223ENST00000641597 GFOD1Q9NXC2 390 aa13.87□□□□□ -0.19
PHGDH-223ENST00000641597 TRBV20OR9-2A0A075B6H5 130 aa13.86□□□□□ -0.19
PHGDH-223ENST00000641597 SAA2-SAA4A0A096LPE2 208 aa13.86□□□□□ -0.19
PHGDH-223ENST00000641597 TMEM250H0YL14 139 aa13.86□□□□□ -0.19
PHGDH-223ENST00000641597 MGST3O14880 152 aa13.86□□□□□ -0.19
PHGDH-223ENST00000641597 HPRT1P00492 218 aa13.86□□□□□ -0.19
PHGDH-223ENST00000641597 SAA2P0DJI9 122 aaPredicted RBP13.86□□□□□ -0.19
PHGDH-223ENST00000641597 ARL14EPLP0DKL9 152 aa13.86□□□□□ -0.19
PHGDH-223ENST00000641597 VDAC2P45880 294 aaPredicted RBP13.86□□□□□ -0.19
PHGDH-223ENST00000641597 FAM27E3Q08E93 113 aa13.86□□□□□ -0.19
PHGDH-223ENST00000641597 NEIL1Q96FI4 390 aaPredicted RBP13.86□□□□□ -0.19
PHGDH-223ENST00000641597 PLXNB1O43157 2135 aa13.86□□□□□ -0.19
PHGDH-223ENST00000641597 FAM216BQ8N7L0 139 aa13.86□□□□□ -0.19
PHGDH-223ENST00000641597 S1PR3Q99500 378 aa13.86□□□□□ -0.19
PHGDH-223ENST00000641597 PRO1933Q9H354 126 aa13.86□□□□□ -0.19
PHGDH-223ENST00000641597 APC2O95996 2303 aa13.86□□□□□ -0.19
PHGDH-223ENST00000641597 DCHS2Q6V1P9 2916 aa13.86□□□□□ -0.19
PHGDH-223ENST00000641597 A0A1B0GUS0 222 aa13.85□□□□□ -0.19
PHGDH-223ENST00000641597 ZNF891A8MT65 544 aaPredicted RBP13.85□□□□□ -0.19
PHGDH-223ENST00000641597 MBP02144 154 aa13.85□□□□□ -0.19
PHGDH-223ENST00000641597 TCF23Q7RTU1 214 aa13.85□□□□□ -0.19
PHGDH-223ENST00000641597 PACRGQ96M98 296 aaPredicted RBP13.85□□□□□ -0.19
PHGDH-223ENST00000641597 CTDSP1Q9GZU7 261 aa13.85□□□□□ -0.19
PHGDH-223ENST00000641597 AHRRA9YTQ3 701 aa13.85□□□□□ -0.19
PHGDH-223ENST00000641597 PRSS46E5RG02 174 aa13.85□□□□□ -0.19
PHGDH-223ENST00000641597 ACOT6Q3I5F7 207 aaPredicted RBP13.85□□□□□ -0.19
PHGDH-223ENST00000641597 LYG1Q8N1E2 194 aa13.85□□□□□ -0.19
PHGDH-223ENST00000641597 CCL13Q99616 98 aa13.85□□□□□ -0.19
PHGDH-223ENST00000641597 SEPSECSQ9HD40 501 aaKnown RBP13.85□□□□□ -0.19
PHGDH-223ENST00000641597 JPT1Q9UK76 154 aa13.85□□□□□ -0.19
PHGDH-223ENST00000641597 FUT9Q9Y231 359 aa13.85□□□□□ -0.19
PHGDH-223ENST00000641597 TCF19Q9Y242 345 aa13.85□□□□□ -0.19
PHGDH-223ENST00000641597 ZNF318Q5VUA4 2279 aa13.85□□□□□ -0.19
PHGDH-223ENST00000641597 A0A1W2PPV4 95 aa13.84□□□□□ -0.19
PHGDH-223ENST00000641597 FOXH1O75593 365 aa13.84□□□□□ -0.19
PHGDH-223ENST00000641597 KLF3P57682 345 aaPredicted RBP13.84□□□□□ -0.19
PHGDH-223ENST00000641597 SPCS3P61009 180 aa13.84□□□□□ -0.19
PHGDH-223ENST00000641597 ARSJQ5FYB0 599 aaPredicted RBP13.84□□□□□ -0.19
PHGDH-223ENST00000641597 GGTLC1Q9BX51 225 aa13.84□□□□□ -0.19
PHGDH-223ENST00000641597 MANBALQ9NQG1 85 aa13.84□□□□□ -0.19
PHGDH-223ENST00000641597 PXMP4Q9Y6I8 212 aa13.84□□□□□ -0.19
PHGDH-223ENST00000641597 TPRP12270 2363 aaKnown RBP13.84□□□□□ -0.19
PHGDH-223ENST00000641597 NAV3Q8IVL0 2385 aa13.84□□□□□ -0.19
PHGDH-223ENST00000641597 TANC2Q9HCD6 1990 aa13.84□□□□□ -0.19
PHGDH-223ENST00000641597 A0A0U1RQK1 487 aa13.84□□□□□ -0.19
PHGDH-223ENST00000641597 A0A1B0GWJ7 208 aa13.84□□□□□ -0.19
PHGDH-223ENST00000641597 C17orf112F2Z3M2 114 aa13.84□□□□□ -0.19
PHGDH-223ENST00000641597 RBFOX2O43251 390 aaKnown RBP eCLIP13.84□□□□□ -0.197e-8■■□□□ 12.4
PHGDH-223ENST00000641597 YPEL1O60688 119 aa13.84□□□□□ -0.19
PHGDH-223ENST00000641597 PMS2P11Q13670 270 aa13.84□□□□□ -0.19
PHGDH-223ENST00000641597 LINC01551Q86U37 167 aa13.84□□□□□ -0.19
PHGDH-223ENST00000641597 YPEL2Q96QA6 119 aa13.84□□□□□ -0.19
PHGDH-223ENST00000641597 PFDN5Q99471 154 aa13.84□□□□□ -0.19
PHGDH-223ENST00000641597 FAM78BQ5VT40 261 aa13.83□□□□□ -0.19
PHGDH-223ENST00000641597 OR4A47Q6IF82 309 aa13.83□□□□□ -0.19
PHGDH-223ENST00000641597 DDB2Q92466 427 aa13.83□□□□□ -0.19
PHGDH-223ENST00000641597 SRD5A3Q9H8P0 318 aa13.83□□□□□ -0.19
PHGDH-223ENST00000641597 DYSFO75923 2080 aa13.83□□□□□ -0.19
PHGDH-223ENST00000641597 CUL9Q8IWT3 2517 aa13.83□□□□□ -0.19
PHGDH-223ENST00000641597 MBD3L4A6NDZ8 208 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms