RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 ANKRD20A5PA0PJZ0 165 aa20.75■□□□□ 0.91
VEGFA-231ENST00000640499 HRASP01112 189 aa20.75■□□□□ 0.91
VEGFA-231ENST00000640499 MYOD1P15172 320 aa20.75■□□□□ 0.91
VEGFA-231ENST00000640499 PI3P19957 117 aa20.75■□□□□ 0.91
VEGFA-231ENST00000640499 TAS2R31P59538 309 aa20.75■□□□□ 0.91
VEGFA-231ENST00000640499 OR4A47Q6IF82 309 aa20.75■□□□□ 0.91
VEGFA-231ENST00000640499 MMD2Q8IY49 270 aa20.75■□□□□ 0.91
VEGFA-231ENST00000640499 OR5T1Q8NG75 326 aa20.75■□□□□ 0.91
VEGFA-231ENST00000640499 OR4C16Q8NGL9 310 aa20.75■□□□□ 0.91
VEGFA-231ENST00000640499 TERB2Q8NHR7 220 aa20.75■□□□□ 0.91
VEGFA-231ENST00000640499 SRSF12Q8WXF0 261 aaKnown RBP20.75■□□□□ 0.91
VEGFA-231ENST00000640499 P2RX4Q99571 388 aa20.75■□□□□ 0.91
VEGFA-231ENST00000640499 PLEKHA2Q9HB19 425 aa20.75■□□□□ 0.91
VEGFA-231ENST00000640499 NDUFA13Q9P0J0 144 aa20.75■□□□□ 0.91
VEGFA-231ENST00000640499 TRAV3A0A0B4J244 114 aa20.74■□□□□ 0.91
VEGFA-231ENST00000640499 NUDT19A8MXV4 375 aa20.74■□□□□ 0.91
VEGFA-231ENST00000640499 APELAP0DMC3 54 aa20.74■□□□□ 0.91
VEGFA-231ENST00000640499 DEFB136Q30KP8 78 aa20.74■□□□□ 0.91
VEGFA-231ENST00000640499 TBC1D26Q86UD7 250 aa20.74■□□□□ 0.91
VEGFA-231ENST00000640499 OR5M8Q8NGP6 311 aa20.74■□□□□ 0.91
VEGFA-231ENST00000640499 OR6Q1Q8NGQ2 317 aa20.74■□□□□ 0.91
VEGFA-231ENST00000640499 CD300LFQ8TDQ1 290 aa20.74■□□□□ 0.91
VEGFA-231ENST00000640499 UBE2E2Q96LR5 201 aa20.74■□□□□ 0.91
VEGFA-231ENST00000640499 THAP7Q9BT49 309 aaPredicted RBP20.74■□□□□ 0.91
VEGFA-231ENST00000640499 SLC2A9Q9NRM0 540 aa20.74■□□□□ 0.91
VEGFA-231ENST00000640499 NOTCH3Q9UM47 2321 aa20.74■□□□□ 0.91
VEGFA-231ENST00000640499 SLC6A1P30531 599 aa20.73■□□□□ 0.91
VEGFA-231ENST00000640499 LPAR6P43657 344 aa20.73■□□□□ 0.91
VEGFA-231ENST00000640499 TMEM65Q6PI78 240 aa20.73■□□□□ 0.91
VEGFA-231ENST00000640499 MRPL41Q8IXM3 137 aaKnown RBP20.73■□□□□ 0.91
VEGFA-231ENST00000640499 LINC00482Q8N8I6 264 aa20.73■□□□□ 0.91
VEGFA-231ENST00000640499 VSTM2AQ8TAG5 236 aa20.73■□□□□ 0.91
VEGFA-231ENST00000640499 TRIM63Q969Q1 353 aa20.73■□□□□ 0.91
VEGFA-231ENST00000640499 BET1LQ9NYM9 111 aa20.73■□□□□ 0.91
VEGFA-231ENST00000640499 I3L521 148 aa20.72■□□□□ 0.91
VEGFA-231ENST00000640499 AKAIN1P0CW23 69 aa20.72■□□□□ 0.91
VEGFA-231ENST00000640499 NQO2P16083 231 aa20.72■□□□□ 0.91
VEGFA-231ENST00000640499 S100A5P33763 92 aa20.72■□□□□ 0.91
VEGFA-231ENST00000640499 ETV6P41212 452 aa20.72■□□□□ 0.91
VEGFA-231ENST00000640499 PPP5CP53041 499 aa20.72■□□□□ 0.91
VEGFA-231ENST00000640499 RND3P61587 244 aa20.72■□□□□ 0.91
VEGFA-231ENST00000640499 MEF2DQ14814 521 aa20.72■□□□□ 0.91
VEGFA-231ENST00000640499 C4orf3Q8WVX3 66 aa20.72■□□□□ 0.91
VEGFA-231ENST00000640499 MS4A10Q96PG2 267 aa20.72■□□□□ 0.91
VEGFA-231ENST00000640499 CGB1A6NKQ9 187 aa20.71■□□□□ 0.91
VEGFA-231ENST00000640499 G3V4G9 280 aa20.71■□□□□ 0.91
VEGFA-231ENST00000640499 RPA2P15927 270 aa20.71■□□□□ 0.91
VEGFA-231ENST00000640499 MYCNOSP40205 109 aa20.71■□□□□ 0.91
VEGFA-231ENST00000640499 SCGB2B2Q4G0G5 96 aa20.71■□□□□ 0.91
VEGFA-231ENST00000640499 POC5Q8NA72 575 aa20.71■□□□□ 0.91
VEGFA-231ENST00000640499 OR13C8Q8NGS7 320 aa20.71■□□□□ 0.91
VEGFA-231ENST00000640499 COMMD9Q9P000 198 aa20.71■□□□□ 0.91
VEGFA-231ENST00000640499 VSIG4Q9Y279 399 aa20.71■□□□□ 0.91
VEGFA-231ENST00000640499 TEX22C9J3V5 150 aa20.7■□□□□ 0.9
VEGFA-231ENST00000640499 CCL24O00175 119 aa20.7■□□□□ 0.9
VEGFA-231ENST00000640499 UPK2O00526 184 aa20.7■□□□□ 0.9
VEGFA-231ENST00000640499 MPPED1O15442 326 aa20.7■□□□□ 0.9
VEGFA-231ENST00000640499 RBMXL2O75526 392 aaKnown RBP20.7■□□□□ 0.9
VEGFA-231ENST00000640499 IGKV1-39P01597 117 aa20.7■□□□□ 0.9
VEGFA-231ENST00000640499 PF4P02776 101 aa20.7■□□□□ 0.9
VEGFA-231ENST00000640499 IGKV1D-39P04432 117 aa20.7■□□□□ 0.9
VEGFA-231ENST00000640499 PGAM2P15259 253 aa20.7■□□□□ 0.9
VEGFA-231ENST00000640499 PYDC2Q56P42 97 aa20.7■□□□□ 0.9
VEGFA-231ENST00000640499 C1QL4Q86Z23 238 aa20.7■□□□□ 0.9
VEGFA-231ENST00000640499 OR4A5Q8NH83 315 aa20.7■□□□□ 0.9
VEGFA-231ENST00000640499 MARCH1Q8TCQ1 289 aa20.7■□□□□ 0.9
VEGFA-231ENST00000640499 TMEM68Q96MH6 324 aa20.7■□□□□ 0.9
VEGFA-231ENST00000640499 OR5B12Q96R08 314 aa20.7■□□□□ 0.9
VEGFA-231ENST00000640499 TMEM140Q9NV12 185 aa20.7■□□□□ 0.9
VEGFA-231ENST00000640499 HMX3A6NHT5 357 aa20.69■□□□□ 0.9
VEGFA-231ENST00000640499 PIGPP57054 158 aa20.69■□□□□ 0.9
VEGFA-231ENST00000640499 RUNX1Q01196 453 aa20.69■□□□□ 0.9
VEGFA-231ENST00000640499 KLF9Q13886 244 aaPredicted RBP20.69■□□□□ 0.9
VEGFA-231ENST00000640499 OXLD1Q5BKU9 147 aa20.69■□□□□ 0.9
VEGFA-231ENST00000640499 SAMD5Q5TGI4 173 aa20.69■□□□□ 0.9
VEGFA-231ENST00000640499 ADAD2Q8NCV1 583 aaKnown RBP20.69■□□□□ 0.9
VEGFA-231ENST00000640499 ZNF486Q96H40 463 aaPredicted RBP20.69■□□□□ 0.9
VEGFA-231ENST00000640499 ALX4Q9H161 411 aaPredicted RBP20.69■□□□□ 0.9
VEGFA-231ENST00000640499 FAM212BQ9NTI7 297 aaPredicted RBP20.69■□□□□ 0.9
VEGFA-231ENST00000640499 CREBL2O60519 120 aaPredicted RBP20.68■□□□□ 0.9
VEGFA-231ENST00000640499 BRI3O95415 125 aa20.68■□□□□ 0.9
VEGFA-231ENST00000640499 PTBP1P26599 531 aaKnown RBP eCLIP20.68■□□□□ 0.9
VEGFA-231ENST00000640499 RPL8P62917 257 aaKnown RBP20.68■□□□□ 0.9
VEGFA-231ENST00000640499 Q8N402 240 aa20.68■□□□□ 0.9
VEGFA-231ENST00000640499 OR51S1Q8NGJ8 323 aa20.68■□□□□ 0.9
VEGFA-231ENST00000640499 PHB2Q99623 299 aa20.68■□□□□ 0.9
VEGFA-231ENST00000640499 AIFM2Q9BRQ8 373 aa20.68■□□□□ 0.9
VEGFA-231ENST00000640499 RTBDNQ9BSG5 229 aaPredicted RBP20.68■□□□□ 0.9
VEGFA-231ENST00000640499 HRASLSQ9HDD0 168 aa20.68■□□□□ 0.9
VEGFA-231ENST00000640499 DNAH3Q8TD57 4116 aa20.68■□□□□ 0.9
VEGFA-231ENST00000640499 DISC1C4P0D8 188 aa20.67■□□□□ 0.9
VEGFA-231ENST00000640499 ACTL6BO94805 426 aa20.67■□□□□ 0.9
VEGFA-231ENST00000640499 HLA-GP17693 338 aa20.67■□□□□ 0.9
VEGFA-231ENST00000640499 MAS1LP35410 378 aa20.67■□□□□ 0.9
VEGFA-231ENST00000640499 G6PCP35575 357 aa20.67■□□□□ 0.9
VEGFA-231ENST00000640499 FHL3Q13643 280 aa20.67■□□□□ 0.9
VEGFA-231ENST00000640499 TP53RKQ96S44 253 aa20.67■□□□□ 0.9
VEGFA-231ENST00000640499 SRRQ9GZT4 340 aa20.67■□□□□ 0.9
VEGFA-231ENST00000640499 SLC2A8Q9NY64 477 aa20.67■□□□□ 0.9
VEGFA-231ENST00000640499 A6NHS1 94 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms