RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 SMIM21Q3B7S5 101 aa13.72□□□□□ -0.21
HNRNPU-228ENST00000640306 FAM201AQ5SY85 155 aa13.72□□□□□ -0.21
HNRNPU-228ENST00000640306 SPATA31B1PQ5VZV4 182 aa13.72□□□□□ -0.21
HNRNPU-228ENST00000640306 TMEM18Q96B42 140 aa13.72□□□□□ -0.21
HNRNPU-228ENST00000640306 IMMP2LQ96T52 175 aa13.72□□□□□ -0.21
HNRNPU-228ENST00000640306 PRDX2P32119 198 aa13.71□□□□□ -0.21
HNRNPU-228ENST00000640306 ZNF134P52741 427 aa13.71□□□□□ -0.21
HNRNPU-228ENST00000640306 SPRNQ5BIV9 151 aa13.71□□□□□ -0.21
HNRNPU-228ENST00000640306 RNASEH2CQ8TDP1 164 aaKnown RBP13.71□□□□□ -0.21
HNRNPU-228ENST00000640306 ACY3Q96HD9 319 aa13.71□□□□□ -0.21
HNRNPU-228ENST00000640306 MGST2Q99735 147 aa13.71□□□□□ -0.21
HNRNPU-228ENST00000640306 RYDENQ9NUL5 291 aaKnown RBP13.71□□□□□ -0.21
HNRNPU-228ENST00000640306 PXMP4Q9Y6I8 212 aa13.71□□□□□ -0.21
HNRNPU-228ENST00000640306 TET2Q6N021 2002 aaPredicted RBP13.71□□□□□ -0.21
HNRNPU-228ENST00000640306 TNCP24821 2201 aa13.71□□□□□ -0.21
HNRNPU-228ENST00000640306 C15orf65H3BRN8 121 aa13.71□□□□□ -0.21
HNRNPU-228ENST00000640306 SRP14P37108 136 aaKnown RBP13.71□□□□□ -0.21
HNRNPU-228ENST00000640306 Q6ZT83 130 aa13.71□□□□□ -0.21
HNRNPU-228ENST00000640306 CISD2Q8N5K1 135 aaKnown RBP13.71□□□□□ -0.21
HNRNPU-228ENST00000640306 WDR31Q8NA23 367 aa13.71□□□□□ -0.21
HNRNPU-228ENST00000640306 SLC17A3O00476 420 aa13.7□□□□□ -0.22
HNRNPU-228ENST00000640306 SLC31A2O15432 143 aa13.7□□□□□ -0.22
HNRNPU-228ENST00000640306 VENTXO95231 258 aa13.7□□□□□ -0.22
HNRNPU-228ENST00000640306 COA6Q5JTJ3 125 aaKnown RBP13.7□□□□□ -0.22
HNRNPU-228ENST00000640306 INO80CQ6PI98 192 aaPredicted RBP13.7□□□□□ -0.22
HNRNPU-228ENST00000640306 C1orf229Q6ZS94 237 aaPredicted RBP13.7□□□□□ -0.22
HNRNPU-228ENST00000640306 FAM122AQ96E09 287 aa13.7□□□□□ -0.22
HNRNPU-228ENST00000640306 MGAQ8IWI9 3026 aa13.7□□□□□ -0.22
HNRNPU-228ENST00000640306 F6UZH7 168 aa13.7□□□□□ -0.22
HNRNPU-228ENST00000640306 PAX5Q02548 391 aa13.7□□□□□ -0.22
HNRNPU-228ENST00000640306 VHLLQ6RSH7 139 aa13.7□□□□□ -0.22
HNRNPU-228ENST00000640306 C9orf106Q8NAJ2 232 aa13.7□□□□□ -0.22
HNRNPU-228ENST00000640306 SFRP2Q96HF1 295 aa13.7□□□□□ -0.22
HNRNPU-228ENST00000640306 ATG101Q9BSB4 218 aa13.7□□□□□ -0.22
HNRNPU-228ENST00000640306 ZDHHC11Q9H8X9 412 aa13.7□□□□□ -0.22
HNRNPU-228ENST00000640306 J3QW42 95 aa13.7□□□□□ -0.22
HNRNPU-228ENST00000640306 FOXH1O75593 365 aa13.7□□□□□ -0.22
HNRNPU-228ENST00000640306 DEFB124Q8NES8 71 aa13.7□□□□□ -0.22
HNRNPU-228ENST00000640306 GGTLC1Q9BX51 225 aa13.7□□□□□ -0.22
HNRNPU-228ENST00000640306 SEPSECSQ9HD40 501 aaKnown RBP13.7□□□□□ -0.22
HNRNPU-228ENST00000640306 MDFIC2A0A1B0GVS7 189 aa13.69□□□□□ -0.22
HNRNPU-228ENST00000640306 PDE6DO43924 150 aa13.69□□□□□ -0.22
HNRNPU-228ENST00000640306 ACTL6BO94805 426 aa13.69□□□□□ -0.22
HNRNPU-228ENST00000640306 TRIP6Q15654 476 aaKnown RBP13.69□□□□□ -0.22
HNRNPU-228ENST00000640306 TMEM178AQ8NBL3 297 aa13.69□□□□□ -0.22
HNRNPU-228ENST00000640306 OCC1Q8TAD7 63 aa13.69□□□□□ -0.22
HNRNPU-228ENST00000640306 LURAP1Q96LR2 239 aa13.69□□□□□ -0.22
HNRNPU-228ENST00000640306 YTHDF2Q9Y5A9 579 aaKnown RBP13.69□□□□□ -0.22
HNRNPU-228ENST00000640306 ARFGEF3Q5TH69 2177 aa13.69□□□□□ -0.22
HNRNPU-228ENST00000640306 IGKV1D-17A0A075B6S4 117 aa13.69□□□□□ -0.22
HNRNPU-228ENST00000640306 SPAARA0A1B0GVQ0 90 aa13.69□□□□□ -0.22
HNRNPU-228ENST00000640306 EREGO14944 169 aa13.69□□□□□ -0.22
HNRNPU-228ENST00000640306 NKX2-8O15522 239 aa13.69□□□□□ -0.22
HNRNPU-228ENST00000640306 FRMD6-AS1P0C7T7 363 aa13.69□□□□□ -0.22
HNRNPU-228ENST00000640306 CBLN1P23435 193 aa13.69□□□□□ -0.22
HNRNPU-228ENST00000640306 KIR2DL2P43627 348 aaPredicted RBP13.69□□□□□ -0.22
HNRNPU-228ENST00000640306 MORN2Q502X0 79 aa13.69□□□□□ -0.22
HNRNPU-228ENST00000640306 TEX38Q6PEX7 206 aa13.69□□□□□ -0.22
HNRNPU-228ENST00000640306 TGIF2LXQ8IUE1 241 aa13.69□□□□□ -0.22
HNRNPU-228ENST00000640306 TMEM140Q9NV12 185 aa13.69□□□□□ -0.22
HNRNPU-228ENST00000640306 CLCF1Q9UBD9 225 aa13.69□□□□□ -0.22
HNRNPU-228ENST00000640306 KITLGP21583 273 aa13.68□□□□□ -0.22
HNRNPU-228ENST00000640306 RPL15P61313 204 aaKnown RBP13.68□□□□□ -0.22
HNRNPU-228ENST00000640306 HLA-DRB5Q30154 266 aa13.68□□□□□ -0.22
HNRNPU-228ENST00000640306 DNLZQ5SXM8 178 aa13.68□□□□□ -0.22
HNRNPU-228ENST00000640306 GBGT1Q8N5D6 347 aa13.68□□□□□ -0.22
HNRNPU-228ENST00000640306 OPN3Q9H1Y3 402 aaPredicted RBP13.68□□□□□ -0.22
HNRNPU-228ENST00000640306 CBLN4Q9NTU7 201 aa13.68□□□□□ -0.22
HNRNPU-228ENST00000640306 MUC6Q6W4X9 2439 aa13.68□□□□□ -0.22
HNRNPU-228ENST00000640306 SPINK4O60575 86 aa13.68□□□□□ -0.22
HNRNPU-228ENST00000640306 GFRA3O60609 400 aa13.68□□□□□ -0.22
HNRNPU-228ENST00000640306 HPRT1P00492 218 aa13.68□□□□□ -0.22
HNRNPU-228ENST00000640306 IGKV3-15P01624 115 aa13.68□□□□□ -0.22
HNRNPU-228ENST00000640306 ADMP35318 185 aa13.68□□□□□ -0.22
HNRNPU-228ENST00000640306 PDLIM4P50479 330 aa13.68□□□□□ -0.22
HNRNPU-228ENST00000640306 TNFSF10P50591 281 aa13.68□□□□□ -0.22
HNRNPU-228ENST00000640306 ERVK-16P61578 105 aa13.68□□□□□ -0.22
HNRNPU-228ENST00000640306 MSMPQ1L6U9 139 aa13.68□□□□□ -0.22
HNRNPU-228ENST00000640306 ZNF718Q3SXZ3 478 aa13.68□□□□□ -0.22
HNRNPU-228ENST00000640306 KCNIP2Q9NS61 270 aa13.68□□□□□ -0.22
HNRNPU-228ENST00000640306 MKRN2OSH3BPM6 223 aa13.67□□□□□ -0.22
HNRNPU-228ENST00000640306 GCGP01275 180 aa13.67□□□□□ -0.22
HNRNPU-228ENST00000640306 TYMSP04818 313 aa13.67□□□□□ -0.22
HNRNPU-228ENST00000640306 SPCS3P61009 180 aa13.67□□□□□ -0.22
HNRNPU-228ENST00000640306 TCF15Q12870 199 aa13.67□□□□□ -0.22
HNRNPU-228ENST00000640306 S1PR3Q99500 378 aa13.67□□□□□ -0.22
HNRNPU-228ENST00000640306 PLCE1Q9P212 2302 aa13.67□□□□□ -0.22
HNRNPU-228ENST00000640306 DUX4L9Q6RFH8 374 aaPredicted RBP13.67□□□□□ -0.22
HNRNPU-228ENST00000640306 FKBP11Q9NYL4 201 aa13.67□□□□□ -0.22
HNRNPU-228ENST00000640306 ELOVL5Q9NYP7 299 aa13.67□□□□□ -0.22
HNRNPU-228ENST00000640306 TCF19Q9Y242 345 aa13.67□□□□□ -0.22
HNRNPU-228ENST00000640306 DMXL2Q8TDJ6 3036 aa13.67□□□□□ -0.22
HNRNPU-228ENST00000640306 PTPRBP23467 1997 aa13.67□□□□□ -0.22
HNRNPU-228ENST00000640306 TAS2R60P59551 318 aa13.67□□□□□ -0.22
HNRNPU-228ENST00000640306 FDCSPQ8NFU4 85 aa13.67□□□□□ -0.22
HNRNPU-228ENST00000640306 PRR7Q8TB68 274 aa13.67□□□□□ -0.22
HNRNPU-228ENST00000640306 NDUFAF3Q9BU61 184 aa13.67□□□□□ -0.22
HNRNPU-228ENST00000640306 ZNF705FA8MVS1 300 aaPredicted RBP13.66□□□□□ -0.22
HNRNPU-228ENST00000640306 ADH4P08319 380 aa13.66□□□□□ -0.22
HNRNPU-228ENST00000640306 ZNF705DP0CH99 300 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms