RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, human

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-222	ENST00000640072	SGMS2	Q8NHU3	365 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	SCGB1C1	Q8TD33	95 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	SLC25A33	Q9BSK2	321 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	PRRG4	Q9BZD6	226 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	MRPL18	Q9H0U6	180 aa	Known RBP	5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	GAGE2D	Q9UEU5	116 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	KLK13	Q9UKR3	277 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	SCN7A	Q01118	1682 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072		A0A0U1RQV1	116 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072		A0A1B0GVT2	93 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072		A0A1B0GX51	115 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	MT-ATP8	P03928	68 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	IGLC6	P0CF74	106 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	CBLN1	P23435	193 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	SRI	P30626	198 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	GPR183	P32249	361 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	WAS	P42768	502 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	LHX2	P50458	406 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	RPL23	P62829	140 aa	Known RBP	5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	FAM27E3	Q08E93	113 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	FAM78A	Q5JUQ0	283 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	FBXL22	Q6P050	247 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	RSPO2	Q6UXX9	243 aa	Predicted RBP	5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	GOLT1A	Q6ZVE7	132 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	MRGPRE	Q86SM8	312 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	GVQW1	Q8N7I0	195 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	OR5D14	Q8NGL3	314 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	GFI1	Q99684	422 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	OARD1	Q9Y530	152 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	BRCA1	P38398	1863 aa	Known RBP	5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	MTCL1	Q9Y4B5	1905 aa	Known RBP	5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	GYPA	P02724	150 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	CRYGD	P07320	174 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	CSN3	P07498	182 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	CSRP1	P21291	193 aa	Known RBP	5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	PSMB3	P49720	205 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	CFHR1	Q03591	330 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	ARFRP1	Q13795	201 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	MORN4	Q8NDC4	146 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	OR4F17	Q8NGA8	305 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	FGF11	Q92914	225 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	SLC25A44	Q96H78	314 aa	Predicted RBP	5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	OR4F4	Q96R69	305 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	TP53TG1	Q9Y2A0	90 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	INSL5	Q9Y5Q6	135 aa		5.17	□□□□□ -1.58
NECAP1-222	ENST00000640072	DOCK11	Q5JSL3	2073 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	SLX4	Q8IY92	1834 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	SLC25A14	O95258	325 aa	Predicted RBP	5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	IFITM1	P13164	125 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	CDA	P32320	146 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	NDUFV3	P56181	108 aa	Known RBP	5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	HSPE1	P61604	102 aa	Known RBP	5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	GGTLC2	Q14390	218 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	VAX1	Q5SQQ9	334 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	STPG1	Q5TH74	334 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	MFSD12	Q6NUT3	480 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	UFSP1	Q6NVU6	142 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	DNM1P46	Q6ZS02	220 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	SSX8	Q7RTT4	187 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	HSD11B1L	Q7Z5J1	315 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	FAM19A2	Q8N3H0	131 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	DDIT4L	Q96D03	193 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	FAM24A	A6NFZ4	105 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	SNURFL	B1AK76	121 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	PTGES	O14684	152 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	KBTBD11	O94819	623 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	MGST1	P10620	155 aa	Known RBP	5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	GATA2	P23769	480 aa	Predicted RBP	5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	OR1D5	P58170	312 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	ETDB	Q3ZM63	59 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	FAM166A	Q6J272	317 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072		Q6ZSR6	202 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	TMEM219	Q86XT9	240 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	C10orf126	Q8N4M7	172 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	FGF13	Q92913	245 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	MCHR1	Q99705	422 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	PRTFDC1	Q9NRG1	225 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	SPANXC	Q9NY87	97 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	CCNL1	Q9UK58	526 aa	Predicted RBP	5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	DDX60L	Q5H9U9	1706 aa	Known RBP	5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	KIAA1551	Q9HCM1	1747 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	DOCK5	Q9H7D0	1870 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	DOCK9	Q9BZ29	2069 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072		H3BRM9	83 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	CXorf1	O96002	111 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	GABRG2	P18507	467 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	RPS11	P62280	158 aa	Known RBP eCLIP	5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	CDC42EP5	Q6NZY7	148 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	FOXI2	Q6ZQN5	318 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	SYT8	Q8NBV8	401 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	ZNF502	Q8TBZ5	544 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072		Q8TCH9	128 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	CT55	Q8WUE5	264 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	ADAT3	Q96EY9	351 aa	Predicted RBP	5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	RPP25	Q9BUL9	199 aa	Known RBP	5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	ZNF442	Q9H7R0	627 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	SLC39A9	Q9NUM3	307 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	TECR	Q9NZ01	308 aa	Known RBP	5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	HILPDA	Q9Y5L2	63 aa		5.16	□□□□□ -1.58
NECAP1-222	ENST00000640072	ZNF646	O15015	1829 aa	Predicted RBP	5.15	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms