RNA–Protein interactions for RNA: ENST00000638514.1

KCNMA1-238, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-238	ENST00000638514	USF3	Q68DE3	2245 aa		11.47	□□□□□ -0.57
KCNMA1-238	ENST00000638514	LIF	P15018	202 aa		11.47	□□□□□ -0.57
KCNMA1-238	ENST00000638514	FBLN7	Q53RD9	439 aa		11.47	□□□□□ -0.57
KCNMA1-238	ENST00000638514	TMEM105	Q8N8V8	129 aa		11.47	□□□□□ -0.57
KCNMA1-238	ENST00000638514	HINT2	Q9BX68	163 aa		11.47	□□□□□ -0.57
KCNMA1-238	ENST00000638514	BOK	Q9UMX3	212 aa	Predicted RBP	11.47	□□□□□ -0.57
KCNMA1-238	ENST00000638514	MUC6	Q6W4X9	2439 aa		11.47	□□□□□ -0.57
KCNMA1-238	ENST00000638514	PLCE1	Q9P212	2302 aa		11.47	□□□□□ -0.57
KCNMA1-238	ENST00000638514	TRBV20OR9-2	A0A075B6H5	130 aa		11.47	□□□□□ -0.57
KCNMA1-238	ENST00000638514	TRAV38-1	A0A0B4J264	116 aa		11.47	□□□□□ -0.57
KCNMA1-238	ENST00000638514	RNF212B	A8MTL3	300 aa		11.47	□□□□□ -0.57
KCNMA1-238	ENST00000638514	TUSC5	Q8IXB3	177 aa		11.47	□□□□□ -0.57
KCNMA1-238	ENST00000638514	CT55	Q8WUE5	264 aa		11.47	□□□□□ -0.57
KCNMA1-238	ENST00000638514	APOBEC3D	Q96AK3	386 aa	Predicted RBP	11.47	□□□□□ -0.57
KCNMA1-238	ENST00000638514	QTRT1	Q9BXR0	403 aa	Known RBP	11.47	□□□□□ -0.57
KCNMA1-238	ENST00000638514	ATRX	P46100	2492 aa		11.47	□□□□□ -0.57
KCNMA1-238	ENST00000638514		A0A1W2PPV4	95 aa		11.47	□□□□□ -0.57
KCNMA1-238	ENST00000638514	CIDEA	O60543	219 aa		11.47	□□□□□ -0.57
KCNMA1-238	ENST00000638514	GPX1	P07203	203 aa		11.47	□□□□□ -0.57
KCNMA1-238	ENST00000638514	IER3	P46695	156 aa		11.47	□□□□□ -0.57
KCNMA1-238	ENST00000638514	LDLRAD2	Q5SZI1	272 aa		11.47	□□□□□ -0.57
KCNMA1-238	ENST00000638514		Q8N976	141 aa		11.47	□□□□□ -0.57
KCNMA1-238	ENST00000638514	ZNF738	Q8NE65	137 aa		11.47	□□□□□ -0.57
KCNMA1-238	ENST00000638514	OR2Y1	Q8NGV0	311 aa		11.47	□□□□□ -0.57
KCNMA1-238	ENST00000638514	SEPSECS	Q9HD40	501 aa	Known RBP	11.47	□□□□□ -0.57
KCNMA1-238	ENST00000638514	HYPM	O75409	117 aa		11.46	□□□□□ -0.57
KCNMA1-238	ENST00000638514	MMP23A	O75900	390 aa		11.46	□□□□□ -0.57
KCNMA1-238	ENST00000638514	PMS2CL	Q68D20	193 aa		11.46	□□□□□ -0.57
KCNMA1-238	ENST00000638514	DRAM1	Q8N682	238 aa		11.46	□□□□□ -0.57
KCNMA1-238	ENST00000638514	OCC1	Q8TAD7	63 aa		11.46	□□□□□ -0.57
KCNMA1-238	ENST00000638514	LRFN3	Q9BTN0	628 aa		11.46	□□□□□ -0.57
KCNMA1-238	ENST00000638514	OBP2B	Q9NPH6	170 aa		11.46	□□□□□ -0.57
KCNMA1-238	ENST00000638514	DLL3	Q9NYJ7	618 aa		11.46	□□□□□ -0.57
KCNMA1-238	ENST00000638514	TBL2	Q9Y4P3	447 aa	Known RBP	11.46	□□□□□ -0.57
KCNMA1-238	ENST00000638514	IGHV2-70D	A0A0C4DH43	119 aa		11.46	□□□□□ -0.57
KCNMA1-238	ENST00000638514	SNURFL	B1AK76	121 aa		11.46	□□□□□ -0.57
KCNMA1-238	ENST00000638514	SH2D1B	O14796	132 aa		11.46	□□□□□ -0.57
KCNMA1-238	ENST00000638514	ZG16	O60844	167 aa		11.46	□□□□□ -0.57
KCNMA1-238	ENST00000638514	IGLC2	P0DOY2	106 aa		11.46	□□□□□ -0.57
KCNMA1-238	ENST00000638514	IGLC3	P0DOY3	106 aa		11.46	□□□□□ -0.57
KCNMA1-238	ENST00000638514	TMEM249	Q2WGJ8	235 aa		11.46	□□□□□ -0.57
KCNMA1-238	ENST00000638514	LOXL4	Q96JB6	756 aa		11.46	□□□□□ -0.57
KCNMA1-238	ENST00000638514	SIRPB1	O00241	398 aa		11.46	□□□□□ -0.58
KCNMA1-238	ENST00000638514	RAC3	P60763	192 aa		11.46	□□□□□ -0.58
KCNMA1-238	ENST00000638514	VWC2	Q2TAL6	325 aa		11.46	□□□□□ -0.58
KCNMA1-238	ENST00000638514	KRTCAP3	Q53RY4	240 aa		11.46	□□□□□ -0.58
KCNMA1-238	ENST00000638514	GCSAML	Q5JQS6	135 aa		11.46	□□□□□ -0.58
KCNMA1-238	ENST00000638514	NUDT11	Q96G61	164 aa		11.46	□□□□□ -0.58
KCNMA1-238	ENST00000638514	TXNDC17	Q9BRA2	123 aa		11.46	□□□□□ -0.58
KCNMA1-238	ENST00000638514	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	11.46	□□□□□ -0.58
KCNMA1-238	ENST00000638514	LRRC30	A6NM36	301 aa		11.45	□□□□□ -0.58
KCNMA1-238	ENST00000638514	SLC17A3	O00476	420 aa		11.45	□□□□□ -0.58
KCNMA1-238	ENST00000638514	G6PC	P35575	357 aa		11.45	□□□□□ -0.58
KCNMA1-238	ENST00000638514	HLA-DRB5	Q30154	266 aa		11.45	□□□□□ -0.58
KCNMA1-238	ENST00000638514	C1orf185	Q5T7R7	199 aa		11.45	□□□□□ -0.58
KCNMA1-238	ENST00000638514	RAB1C	Q92928	201 aa		11.45	□□□□□ -0.58
KCNMA1-238	ENST00000638514	NRN1	Q9NPD7	142 aa		11.45	□□□□□ -0.58
KCNMA1-238	ENST00000638514	IGHV2OR16-5	A0A0B4J2B6	119 aa		11.45	□□□□□ -0.58
KCNMA1-238	ENST00000638514	AMT	P48728	403 aa		11.45	□□□□□ -0.58
KCNMA1-238	ENST00000638514	FABP6	P51161	128 aa		11.45	□□□□□ -0.58
KCNMA1-238	ENST00000638514	OR1C1	Q15619	314 aa		11.45	□□□□□ -0.58
KCNMA1-238	ENST00000638514	SLC23A3	Q6PIS1	610 aa		11.45	□□□□□ -0.58
KCNMA1-238	ENST00000638514	SLC24A4	Q8NFF2	622 aa		11.45	□□□□□ -0.58
KCNMA1-238	ENST00000638514	GNB4	Q9HAV0	340 aa		11.45	□□□□□ -0.58
KCNMA1-238	ENST00000638514	KIAA1549	Q9HCM3	1950 aa		11.45	□□□□□ -0.58
KCNMA1-238	ENST00000638514	SCO2	A0A1W2PP80	73 aa		11.45	□□□□□ -0.58
KCNMA1-238	ENST00000638514	ODAM	A1E959	279 aa		11.45	□□□□□ -0.58
KCNMA1-238	ENST00000638514	ZNF253	O75346	499 aa		11.45	□□□□□ -0.58
KCNMA1-238	ENST00000638514	EDDM3A	Q14507	147 aa		11.45	□□□□□ -0.58
KCNMA1-238	ENST00000638514	COLCA1	Q6ZS62	124 aa		11.45	□□□□□ -0.58
KCNMA1-238	ENST00000638514	FAM58A	Q8N1B3	248 aa		11.45	□□□□□ -0.58
KCNMA1-238	ENST00000638514	ZDHHC16	Q969W1	377 aa		11.45	□□□□□ -0.58
KCNMA1-238	ENST00000638514	TMEM204	Q9BSN7	226 aa		11.45	□□□□□ -0.58
KCNMA1-238	ENST00000638514		K7ESF4	209 aa		11.44	□□□□□ -0.58
KCNMA1-238	ENST00000638514	LYZL6	O75951	148 aa		11.44	□□□□□ -0.58
KCNMA1-238	ENST00000638514	LGALS4	P56470	323 aa		11.44	□□□□□ -0.58
KCNMA1-238	ENST00000638514	EDDM3B	P56851	147 aa		11.44	□□□□□ -0.58
KCNMA1-238	ENST00000638514	MOB1B	Q7L9L4	216 aa		11.44	□□□□□ -0.58
KCNMA1-238	ENST00000638514	ZNF716	A6NP11	495 aa		11.44	□□□□□ -0.58
KCNMA1-238	ENST00000638514	DNPH1	O43598	174 aa		11.44	□□□□□ -0.58
KCNMA1-238	ENST00000638514	ZNF816	Q0VGE8	651 aa	Predicted RBP	11.44	□□□□□ -0.58
KCNMA1-238	ENST00000638514	TRIP6	Q15654	476 aa	Known RBP	11.44	□□□□□ -0.58
KCNMA1-238	ENST00000638514	ZNF808	Q8N4W9	903 aa	Predicted RBP	11.44	□□□□□ -0.58
KCNMA1-238	ENST00000638514	NOTCH3	Q9UM47	2321 aa		11.44	□□□□□ -0.58
KCNMA1-238	ENST00000638514	TRBV9	A0A0B4J1U6	114 aa		11.44	□□□□□ -0.58
KCNMA1-238	ENST00000638514	RPEL1	Q2QD12	228 aa		11.44	□□□□□ -0.58
KCNMA1-238	ENST00000638514	KLHDC1	Q8N7A1	406 aa		11.44	□□□□□ -0.58
KCNMA1-238	ENST00000638514	TRAPPC2L	Q9UL33	140 aa		11.44	□□□□□ -0.58
KCNMA1-238	ENST00000638514	IGF2R	P11717	2491 aa		11.43	□□□□□ -0.58
KCNMA1-238	ENST00000638514	NCOR2	Q9Y618	2525 aa		11.43	□□□□□ -0.58
KCNMA1-238	ENST00000638514	RAMP3	O60896	148 aa		11.43	□□□□□ -0.58
KCNMA1-238	ENST00000638514	PMCH	P20382	165 aa		11.43	□□□□□ -0.58
KCNMA1-238	ENST00000638514	CA6	P23280	308 aa		11.43	□□□□□ -0.58
KCNMA1-238	ENST00000638514	RPL19	P84098	196 aa	Known RBP	11.43	□□□□□ -0.58
KCNMA1-238	ENST00000638514	HTD2	P86397	168 aa		11.43	□□□□□ -0.58
KCNMA1-238	ENST00000638514	PCOLCE	Q15113	449 aa		11.43	□□□□□ -0.58
KCNMA1-238	ENST00000638514	OCIAD2	Q56VL3	154 aa		11.43	□□□□□ -0.58
KCNMA1-238	ENST00000638514	CST9L	Q9H4G1	147 aa		11.43	□□□□□ -0.58
KCNMA1-238	ENST00000638514	CREBBP	Q92793	2442 aa		11.43	□□□□□ -0.58
KCNMA1-238	ENST00000638514	ANKRD30BL	A7E2S9	258 aa		11.43	□□□□□ -0.58

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