RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 KBTBD11O94819 623 aa13.95□□□□□ -0.18
CLN6-220ENST00000637450 GNG2P59768 71 aa13.95□□□□□ -0.18
CLN6-220ENST00000637450 CD81P60033 236 aa13.95□□□□□ -0.18
CLN6-220ENST00000637450 DEFB114Q30KQ6 69 aa13.95□□□□□ -0.18
CLN6-220ENST00000637450 MFSD4AQ8N468 514 aa13.95□□□□□ -0.18
CLN6-220ENST00000637450 TMEM167AQ8TBQ9 72 aa13.95□□□□□ -0.18
CLN6-220ENST00000637450 TCTEX1D2Q8WW35 142 aa13.95□□□□□ -0.18
CLN6-220ENST00000637450 NEURL2Q9BR09 285 aa13.95□□□□□ -0.18
CLN6-220ENST00000637450 SLC2A9Q9NRM0 540 aa13.95□□□□□ -0.18
CLN6-220ENST00000637450 DAPK2Q9UIK4 370 aa13.95□□□□□ -0.18
CLN6-220ENST00000637450 SPATA2Q9UM82 520 aa13.95□□□□□ -0.18
CLN6-220ENST00000637450 A0A1B0GW64 132 aa13.94□□□□□ -0.18
CLN6-220ENST00000637450 NPIPB5A8MRT5 1133 aa13.94□□□□□ -0.18
CLN6-220ENST00000637450 PPP5D1E7EU14 171 aa13.94□□□□□ -0.18
CLN6-220ENST00000637450 MAS1LP35410 378 aa13.94□□□□□ -0.18
CLN6-220ENST00000637450 KIR2DS2P43631 304 aa13.94□□□□□ -0.18
CLN6-220ENST00000637450 RPL27AP46776 148 aaKnown RBP13.94□□□□□ -0.18
CLN6-220ENST00000637450 ZNF66Q6ZN08 573 aa13.94□□□□□ -0.18
CLN6-220ENST00000637450 C19orf35Q6ZS72 473 aa13.94□□□□□ -0.18
CLN6-220ENST00000637450 SPARTQ8N0X7 666 aa13.94□□□□□ -0.18
CLN6-220ENST00000637450 HIPK2Q9H2X6 1198 aa13.94□□□□□ -0.18
CLN6-220ENST00000637450 PLEKHA3Q9HB20 300 aa13.94□□□□□ -0.18
CLN6-220ENST00000637450 FBXL7Q9UJT9 491 aa13.94□□□□□ -0.18
CLN6-220ENST00000637450 CEPT1Q9Y6K0 416 aa13.94□□□□□ -0.18
CLN6-220ENST00000637450 C2orf70A6NJV1 201 aa13.93□□□□□ -0.18
CLN6-220ENST00000637450 LGALS9O00182 355 aa13.93□□□□□ -0.18
CLN6-220ENST00000637450 GGCTO75223 188 aaKnown RBP13.93□□□□□ -0.18
CLN6-220ENST00000637450 TPPPO94811 219 aa13.93□□□□□ -0.18
CLN6-220ENST00000637450 OR2C1O95371 312 aa13.93□□□□□ -0.18
CLN6-220ENST00000637450 HLA-AP01891 365 aaKnown RBP13.93□□□□□ -0.18
CLN6-220ENST00000637450 CRYGCP07315 174 aa13.93□□□□□ -0.18
CLN6-220ENST00000637450 CD7P09564 240 aa13.93□□□□□ -0.18
CLN6-220ENST00000637450 ZNF735P0CB33 412 aa13.93□□□□□ -0.18
CLN6-220ENST00000637450 FOLR2P14207 255 aa13.93□□□□□ -0.18
CLN6-220ENST00000637450 PSMB9P28065 219 aa13.93□□□□□ -0.18
CLN6-220ENST00000637450 KLK9Q2XQG4 91 aa13.93□□□□□ -0.18
CLN6-220ENST00000637450 SFXN4Q6P4A7 337 aa13.93□□□□□ -0.18
CLN6-220ENST00000637450 GPHB5Q86YW7 130 aa13.93□□□□□ -0.18
CLN6-220ENST00000637450 DYNLRB2Q8TF09 96 aa13.93□□□□□ -0.18
CLN6-220ENST00000637450 FANCD2OSQ96PS1 177 aa13.93□□□□□ -0.18
CLN6-220ENST00000637450 FYTTD1Q96QD9 318 aaKnown RBP13.93□□□□□ -0.18
CLN6-220ENST00000637450 SLC2A8Q9NY64 477 aa13.93□□□□□ -0.18
CLN6-220ENST00000637450 TECRQ9NZ01 308 aaKnown RBP13.93□□□□□ -0.18
CLN6-220ENST00000637450 KLK9Q9UKQ9 250 aa13.93□□□□□ -0.18
CLN6-220ENST00000637450 RRP15Q9Y3B9 282 aaKnown RBP13.93□□□□□ -0.18
CLN6-220ENST00000637450 DPPA5A6NC42 116 aa13.92□□□□□ -0.18
CLN6-220ENST00000637450 NDUFB8O95169 186 aa13.92□□□□□ -0.18
CLN6-220ENST00000637450 EDN2P20800 178 aa13.92□□□□□ -0.18
CLN6-220ENST00000637450 DEFB125Q8N687 156 aa13.92□□□□□ -0.18
CLN6-220ENST00000637450 LGALS14Q8TCE9 139 aa13.92□□□□□ -0.18
CLN6-220ENST00000637450 RETNQ9HD89 108 aa13.92□□□□□ -0.18
CLN6-220ENST00000637450 ZC4H2Q9NQZ6 224 aa13.92□□□□□ -0.18
CLN6-220ENST00000637450 RHBDL2Q9NX52 303 aa13.92□□□□□ -0.18
CLN6-220ENST00000637450 TAS2R8Q9NYW2 309 aa13.92□□□□□ -0.18
CLN6-220ENST00000637450 SSR3Q9UNL2 185 aa13.92□□□□□ -0.18
CLN6-220ENST00000637450 RBMY1BA6NDE4 496 aaKnown RBP13.91□□□□□ -0.18
CLN6-220ENST00000637450 RBMY1EA6NEQ0 496 aaKnown RBP13.91□□□□□ -0.18
CLN6-220ENST00000637450 HRASP01112 189 aa13.91□□□□□ -0.18
CLN6-220ENST00000637450 RBMY1DP0C7P1 496 aaKnown RBP13.91□□□□□ -0.18
CLN6-220ENST00000637450 AREGP15514 252 aa13.91□□□□□ -0.18
CLN6-220ENST00000637450 PSMB6P28072 239 aa13.91□□□□□ -0.18
CLN6-220ENST00000637450 MSMO1Q15800 293 aa13.91□□□□□ -0.18
CLN6-220ENST00000637450 FCGR1BQ92637 280 aa13.91□□□□□ -0.18
CLN6-220ENST00000637450 CCDC140Q96MF4 163 aa13.91□□□□□ -0.18
CLN6-220ENST00000637450 GPHA2Q96T91 129 aa13.91□□□□□ -0.18
CLN6-220ENST00000637450 IGHV3-23P01764 117 aa13.9□□□□□ -0.18
CLN6-220ENST00000637450 CTRB1P17538 263 aa13.9□□□□□ -0.18
CLN6-220ENST00000637450 FCGR2CP31995 323 aa13.9□□□□□ -0.18
CLN6-220ENST00000637450 SDC2P34741 201 aa13.9□□□□□ -0.18
CLN6-220ENST00000637450 ARL3P36405 182 aa13.9□□□□□ -0.18
CLN6-220ENST00000637450 RPL8P62917 257 aaKnown RBP13.9□□□□□ -0.18
CLN6-220ENST00000637450 GUCA2BQ16661 112 aa13.9□□□□□ -0.18
CLN6-220ENST00000637450 CTRB2Q6GPI1 263 aa13.9□□□□□ -0.18
CLN6-220ENST00000637450 SSX9Q7RTT3 188 aa13.9□□□□□ -0.18
CLN6-220ENST00000637450 BEST4Q8NFU0 473 aa13.9□□□□□ -0.18
CLN6-220ENST00000637450 CCL28Q9NRJ3 127 aa13.9□□□□□ -0.18
CLN6-220ENST00000637450 TRAV18A0A075B6X5 111 aa13.89□□□□□ -0.19
CLN6-220ENST00000637450 OR11H12B2RN74 326 aa13.89□□□□□ -0.19
CLN6-220ENST00000637450 DHFRP00374 187 aa13.89□□□□□ -0.19
CLN6-220ENST00000637450 PTHLHP12272 177 aa13.89□□□□□ -0.19
CLN6-220ENST00000637450 HIST1H1BP16401 226 aaKnown RBP13.89□□□□□ -0.19
CLN6-220ENST00000637450 CBLN1P23435 193 aa13.89□□□□□ -0.19
CLN6-220ENST00000637450 ARPC4P59998 168 aa13.89□□□□□ -0.19
CLN6-220ENST00000637450 CLEC19AQ6UXS0 136 aa13.89□□□□□ -0.19
CLN6-220ENST00000637450 HOGA1Q86XE5 327 aa13.89□□□□□ -0.19
CLN6-220ENST00000637450 GVQW1Q8N7I0 195 aa13.89□□□□□ -0.19
CLN6-220ENST00000637450 ZBTB34Q8NCN2 500 aa13.89□□□□□ -0.19
CLN6-220ENST00000637450 OR5H6Q8NGV6 325 aa13.89□□□□□ -0.19
CLN6-220ENST00000637450 OR4A5Q8NH83 315 aa13.89□□□□□ -0.19
CLN6-220ENST00000637450 SECTM1Q8WVN6 248 aa13.89□□□□□ -0.19
CLN6-220ENST00000637450 WDR89Q96FK6 387 aaPredicted RBP13.89□□□□□ -0.19
CLN6-220ENST00000637450 FAM110AQ9BQ89 295 aa13.89□□□□□ -0.19
CLN6-220ENST00000637450 YTHDF1Q9BYJ9 559 aaKnown RBP13.89□□□□□ -0.19
CLN6-220ENST00000637450 WFDC10AQ9H1F0 79 aa13.89□□□□□ -0.19
CLN6-220ENST00000637450 SRD5A3Q9H8P0 318 aa13.89□□□□□ -0.19
CLN6-220ENST00000637450 BET1LQ9NYM9 111 aa13.89□□□□□ -0.19
CLN6-220ENST00000637450 S4R3C0 116 aa13.89□□□□□ -0.19
CLN6-220ENST00000637450 CGB1A6NKQ9 187 aa13.88□□□□□ -0.19
CLN6-220ENST00000637450 TNFSF12O43508 249 aa13.88□□□□□ -0.19
CLN6-220ENST00000637450 CLEC2LP0C7M8 214 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms