RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 UBE2V1Q13404 147 aa9.6□□□□□ -0.87
CLN6-217ENST00000636964 SRSF7Q16629 238 aaKnown RBP eCLIP9.6□□□□□ -0.87
CLN6-217ENST00000636964 ZNF880Q6PDB4 577 aa9.6□□□□□ -0.87
CLN6-217ENST00000636964 TBC1D26Q86UD7 250 aa9.6□□□□□ -0.87
CLN6-217ENST00000636964 ZCCHC24Q8N2G6 241 aaKnown RBP9.6□□□□□ -0.87
CLN6-217ENST00000636964 ITLN1Q8WWA0 313 aa9.6□□□□□ -0.87
CLN6-217ENST00000636964 STRAPQ9Y3F4 350 aaKnown RBP9.6□□□□□ -0.87
CLN6-217ENST00000636964 K7ERU9 68 aa9.6□□□□□ -0.87
CLN6-217ENST00000636964 CD55P08174 381 aa9.6□□□□□ -0.87
CLN6-217ENST00000636964 ID1P41134 155 aa9.6□□□□□ -0.87
CLN6-217ENST00000636964 RAB31Q13636 194 aa9.6□□□□□ -0.87
CLN6-217ENST00000636964 TMEM183AQ8IXX5 376 aa9.6□□□□□ -0.87
CLN6-217ENST00000636964 C1orf174Q8IYL3 243 aa9.6□□□□□ -0.87
CLN6-217ENST00000636964 OR4X1Q8NH49 305 aa9.6□□□□□ -0.87
CLN6-217ENST00000636964 RPUSD4Q96CM3 377 aaKnown RBP9.6□□□□□ -0.87
CLN6-217ENST00000636964 MEMO1Q9Y316 297 aa9.6□□□□□ -0.87
CLN6-217ENST00000636964 YLPM1P49750 1951 aaKnown RBP9.6□□□□□ -0.87
CLN6-217ENST00000636964 C3orf85A0A1B0GTC6 90 aa9.59□□□□□ -0.87
CLN6-217ENST00000636964 GNG7O60262 68 aa9.59□□□□□ -0.87
CLN6-217ENST00000636964 TUSC2O75896 110 aa9.59□□□□□ -0.87
CLN6-217ENST00000636964 BRI3O95415 125 aa9.59□□□□□ -0.87
CLN6-217ENST00000636964 GABRA2P47869 451 aa9.59□□□□□ -0.87
CLN6-217ENST00000636964 BSPH1Q075Z2 132 aa9.59□□□□□ -0.87
CLN6-217ENST00000636964 PRSS8Q16651 343 aa9.59□□□□□ -0.87
CLN6-217ENST00000636964 CD177Q8N6Q3 437 aa9.59□□□□□ -0.87
CLN6-217ENST00000636964 PLEKHA2Q9HB19 425 aa9.59□□□□□ -0.87
CLN6-217ENST00000636964 NGBQ9NPG2 151 aa9.59□□□□□ -0.87
CLN6-217ENST00000636964 ELOVL5Q9NYP7 299 aa9.59□□□□□ -0.87
CLN6-217ENST00000636964 TRBV6-6A0A0A6YYG2 114 aa9.59□□□□□ -0.87
CLN6-217ENST00000636964 CLEC18AA5D8T8 446 aa9.59□□□□□ -0.87
CLN6-217ENST00000636964 MDH2P40926 338 aaKnown RBP9.59□□□□□ -0.87
CLN6-217ENST00000636964 C5orf64Q2M2E5 130 aa9.59□□□□□ -0.87
CLN6-217ENST00000636964 TMEM177Q53S58 311 aa9.59□□□□□ -0.87
CLN6-217ENST00000636964 CCDC71LQ8N9Z2 235 aa9.59□□□□□ -0.87
CLN6-217ENST00000636964 CLEC18CQ8NCF0 446 aa9.59□□□□□ -0.87
CLN6-217ENST00000636964 MSI2Q96DH6 328 aaKnown RBP9.59□□□□□ -0.87
CLN6-217ENST00000636964 TVP23CQ96ET8 276 aa9.59□□□□□ -0.87
CLN6-217ENST00000636964 DCTN5Q9BTE1 182 aa9.59□□□□□ -0.87
CLN6-217ENST00000636964 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.59□□□□□ -0.87
CLN6-217ENST00000636964 EDDM3AQ14507 147 aa9.59□□□□□ -0.87
CLN6-217ENST00000636964 LIAT1Q6ZQX7 453 aa9.59□□□□□ -0.87
CLN6-217ENST00000636964 TGIF2LYQ8IUE0 185 aa9.59□□□□□ -0.87
CLN6-217ENST00000636964 GCSAMQ8N6F7 178 aa9.59□□□□□ -0.87
CLN6-217ENST00000636964 OR1L1Q8NH94 360 aa9.59□□□□□ -0.87
CLN6-217ENST00000636964 COQ2Q96H96 371 aa9.59□□□□□ -0.87
CLN6-217ENST00000636964 PGPEP1Q9NXJ5 209 aa9.59□□□□□ -0.87
CLN6-217ENST00000636964 UBE2J1Q9Y385 318 aaPredicted RBP9.59□□□□□ -0.87
CLN6-217ENST00000636964 OR2W1Q9Y3N9 320 aa9.59□□□□□ -0.87
CLN6-217ENST00000636964 IGLV3-9A0A075B6K5 115 aa9.58□□□□□ -0.88
CLN6-217ENST00000636964 GPR137BO60478 399 aa9.58□□□□□ -0.88
CLN6-217ENST00000636964 RND2P52198 227 aa9.58□□□□□ -0.88
CLN6-217ENST00000636964 H1FOOQ8IZA3 346 aaPredicted RBP9.58□□□□□ -0.88
CLN6-217ENST00000636964 RFESDQ8TAC1 157 aa9.58□□□□□ -0.88
CLN6-217ENST00000636964 JKAMPQ9P055 326 aa9.58□□□□□ -0.88
CLN6-217ENST00000636964 PITPNC1Q9UKF7 332 aa9.58□□□□□ -0.88
CLN6-217ENST00000636964 E5RGE8 158 aa9.58□□□□□ -0.88
CLN6-217ENST00000636964 PSG2P11465 335 aa9.58□□□□□ -0.88
CLN6-217ENST00000636964 UCP1P25874 307 aa9.58□□□□□ -0.88
CLN6-217ENST00000636964 PRDX2P32119 198 aa9.58□□□□□ -0.88
CLN6-217ENST00000636964 ATP5J2P56134 94 aa9.58□□□□□ -0.88
CLN6-217ENST00000636964 LY6DQ14210 128 aa9.58□□□□□ -0.88
CLN6-217ENST00000636964 SLC35E3Q7Z769 313 aa9.58□□□□□ -0.88
CLN6-217ENST00000636964 ODF3L1Q8IXM7 274 aa9.58□□□□□ -0.88
CLN6-217ENST00000636964 SLC35G3Q8N808 338 aa9.58□□□□□ -0.88
CLN6-217ENST00000636964 OR51H1Q8NH63 302 aa9.58□□□□□ -0.88
CLN6-217ENST00000636964 CST9LQ9H4G1 147 aa9.58□□□□□ -0.88
CLN6-217ENST00000636964 NSG2Q9Y328 171 aa9.58□□□□□ -0.88
CLN6-217ENST00000636964 TACC2O95359 2948 aa9.58□□□□□ -0.88
CLN6-217ENST00000636964 CNIH1O95406 144 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 ATP6V0CP27449 155 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 C3orf36Q3SXR2 165 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 FAM90A2PQ658T7 463 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 LGI3Q8N145 548 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 LFNGQ8NES3 379 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 RNF150Q9ULK6 438 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 WIPI2Q9Y4P8 454 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 BORCS7-ASMTA0A0B4J1R7 106 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 TMEM30CPA0ZSE6 113 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 IGHV1-46P01743 117 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 RAB9AP51151 201 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 CCL8P80075 99 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 KLRB1Q12918 225 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 ZNRF1Q8ND25 227 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 DEFB108BQ8NET1 73 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 CLDND2Q8NHS1 167 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 VKORC1Q9BQB6 163 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 SMDT1Q9H4I9 107 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 C11orf1Q9H5F2 150 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 SMPXQ9UHP9 88 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 WSB1Q9Y6I7 421 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 ZFYVE26Q68DK2 2539 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 CACNA1AO00555 2505 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 SPG11Q96JI7 2443 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 IGKV1D-17A0A075B6S4 117 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 TRAV34A0A0B4J273 112 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 FAM90A27PA6NNH2 459 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 C12orf77C9JDV5 145 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 PGLYRP1O75594 196 aaPredicted RBP9.57□□□□□ -0.88
CLN6-217ENST00000636964 DFFBO76075 338 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 TNFAIP6P98066 277 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms