RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 TGIF2LYQ8IUE0 185 aa11.64□□□□□ -0.55
CACNA1A-228ENST00000636610 CTDSP1Q9GZU7 261 aa11.64□□□□□ -0.55
CACNA1A-228ENST00000636610 ZNF318Q5VUA4 2279 aa11.64□□□□□ -0.55
CACNA1A-228ENST00000636610 TRBV20OR9-2A0A075B6H5 130 aa11.63□□□□□ -0.55
CACNA1A-228ENST00000636610 IGKV1D-17A0A075B6S4 117 aa11.63□□□□□ -0.55
CACNA1A-228ENST00000636610 SPAARA0A1B0GVQ0 90 aa11.63□□□□□ -0.55
CACNA1A-228ENST00000636610 NUPR1O60356 82 aa11.63□□□□□ -0.55
CACNA1A-228ENST00000636610 DUTP33316 252 aaKnown RBP11.63□□□□□ -0.55
CACNA1A-228ENST00000636610 ACOT6Q3I5F7 207 aaPredicted RBP11.63□□□□□ -0.55
CACNA1A-228ENST00000636610 ZNF600Q6ZNG1 722 aa11.63□□□□□ -0.55
CACNA1A-228ENST00000636610 SGMS2Q8NHU3 365 aa11.63□□□□□ -0.55
CACNA1A-228ENST00000636610 ZDHHC11Q9H8X9 412 aa11.63□□□□□ -0.55
CACNA1A-228ENST00000636610 M0R1B8 84 aa11.63□□□□□ -0.55
CACNA1A-228ENST00000636610 RAB29O14966 203 aa11.63□□□□□ -0.55
CACNA1A-228ENST00000636610 IL3RAP26951 378 aa11.63□□□□□ -0.55
CACNA1A-228ENST00000636610 SLC35B1P78383 322 aa11.63□□□□□ -0.55
CACNA1A-228ENST00000636610 ZNF718Q3SXZ3 478 aa11.63□□□□□ -0.55
CACNA1A-228ENST00000636610 TREML4Q6UXN2 200 aa11.63□□□□□ -0.55
CACNA1A-228ENST00000636610 DMRTC2Q8IXT2 367 aaPredicted RBP11.63□□□□□ -0.55
CACNA1A-228ENST00000636610 ZNF664Q8N3J9 261 aa11.63□□□□□ -0.55
CACNA1A-228ENST00000636610 IER2Q9BTL4 223 aa11.63□□□□□ -0.55
CACNA1A-228ENST00000636610 HES4Q9HCC6 221 aa11.63□□□□□ -0.55
CACNA1A-228ENST00000636610 SEPSECSQ9HD40 501 aaKnown RBP11.63□□□□□ -0.55
CACNA1A-228ENST00000636610 CEP295Q9C0D2 2601 aa11.63□□□□□ -0.55
CACNA1A-228ENST00000636610 NAV3Q8IVL0 2385 aa11.63□□□□□ -0.55
CACNA1A-228ENST00000636610 DVL1O14640 695 aa11.62□□□□□ -0.55
CACNA1A-228ENST00000636610 INO80CQ6PI98 192 aaPredicted RBP11.62□□□□□ -0.55
CACNA1A-228ENST00000636610 LINC01551Q86U37 167 aa11.62□□□□□ -0.55
CACNA1A-228ENST00000636610 TAAR6Q96RI8 345 aa11.62□□□□□ -0.55
CACNA1A-228ENST00000636610 SVEP1Q4LDE5 3571 aa11.62□□□□□ -0.55
CACNA1A-228ENST00000636610 DSCAMO60469 2012 aa11.62□□□□□ -0.55
CACNA1A-228ENST00000636610 IGHV2OR16-5A0A0B4J2B6 119 aa11.62□□□□□ -0.55
CACNA1A-228ENST00000636610 C17orf112F2Z3M2 114 aa11.62□□□□□ -0.55
CACNA1A-228ENST00000636610 TMEM250H0YL14 139 aa11.62□□□□□ -0.55
CACNA1A-228ENST00000636610 SCGB1D1O95968 90 aa11.62□□□□□ -0.55
CACNA1A-228ENST00000636610 IGHV3-48P01763 117 aa11.62□□□□□ -0.55
CACNA1A-228ENST00000636610 OR4A8P0C604 315 aa11.62□□□□□ -0.55
CACNA1A-228ENST00000636610 NDUFB7P17568 137 aa11.62□□□□□ -0.55
CACNA1A-228ENST00000636610 EIF4EBP1Q13541 118 aaPredicted RBP11.62□□□□□ -0.55
CACNA1A-228ENST00000636610 PRR31Q5SQ13 230 aa11.62□□□□□ -0.55
CACNA1A-228ENST00000636610 ZCCHC24Q8N2G6 241 aaKnown RBP11.62□□□□□ -0.55
CACNA1A-228ENST00000636610 OR2V2Q96R30 315 aa11.62□□□□□ -0.55
CACNA1A-228ENST00000636610 PXMP4Q9Y6I8 212 aa11.62□□□□□ -0.55
CACNA1A-228ENST00000636610 PIGBOS1A0A0B4J2F0 54 aa11.62□□□□□ -0.55
CACNA1A-228ENST00000636610 IGHV1-18A0A0C4DH31 117 aa11.62□□□□□ -0.55
CACNA1A-228ENST00000636610 MLANAQ16655 118 aa11.62□□□□□ -0.55
CACNA1A-228ENST00000636610 Q8N7P7 452 aa11.62□□□□□ -0.55
CACNA1A-228ENST00000636610 CIB3Q96Q77 187 aaPredicted RBP11.62□□□□□ -0.55
CACNA1A-228ENST00000636610 MGST2Q99735 147 aa11.62□□□□□ -0.55
CACNA1A-228ENST00000636610 HIPK2Q9H2X6 1198 aa11.62□□□□□ -0.55
CACNA1A-228ENST00000636610 DCAF16Q9NXF7 216 aa11.62□□□□□ -0.55
CACNA1A-228ENST00000636610 CLCF1Q9UBD9 225 aa11.62□□□□□ -0.55
CACNA1A-228ENST00000636610 TRAPPC1Q9Y5R8 145 aa11.62□□□□□ -0.55
CACNA1A-228ENST00000636610 MED13LQ71F56 2210 aa11.61□□□□□ -0.55
CACNA1A-228ENST00000636610 TMEM210A6NLX4 147 aa11.61□□□□□ -0.55
CACNA1A-228ENST00000636610 MBP02144 154 aa11.61□□□□□ -0.55
CACNA1A-228ENST00000636610 OR5I1Q13606 314 aa11.61□□□□□ -0.55
CACNA1A-228ENST00000636610 ATP6V1FQ16864 119 aa11.61□□□□□ -0.55
CACNA1A-228ENST00000636610 MORN2Q502X0 79 aa11.61□□□□□ -0.55
CACNA1A-228ENST00000636610 LURAP1LQ8IV03 231 aa11.61□□□□□ -0.55
CACNA1A-228ENST00000636610 LYG1Q8N1E2 194 aa11.61□□□□□ -0.55
CACNA1A-228ENST00000636610 TMEM170AQ8WVE7 144 aa11.61□□□□□ -0.55
CACNA1A-228ENST00000636610 TMEM140Q9NV12 185 aa11.61□□□□□ -0.55
CACNA1A-228ENST00000636610 TIMM9Q9Y5J7 89 aa11.61□□□□□ -0.55
CACNA1A-228ENST00000636610 ABCA4P78363 2273 aa11.61□□□□□ -0.55
CACNA1A-228ENST00000636610 C15orf65H3BRN8 121 aa11.61□□□□□ -0.55
CACNA1A-228ENST00000636610 DEFB109BQ30KR1 87 aa11.61□□□□□ -0.55
CACNA1A-228ENST00000636610 COL27A1Q8IZC6 1860 aaPredicted RBP11.61□□□□□ -0.55
CACNA1A-228ENST00000636610 RND1Q92730 232 aa11.61□□□□□ -0.55
CACNA1A-228ENST00000636610 MISP3Q96FF7 219 aa11.61□□□□□ -0.55
CACNA1A-228ENST00000636610 S1PR3Q99500 378 aa11.61□□□□□ -0.55
CACNA1A-228ENST00000636610 HSD17B10Q99714 261 aaKnown RBP11.61□□□□□ -0.55
CACNA1A-228ENST00000636610 ATG101Q9BSB4 218 aa11.61□□□□□ -0.55
CACNA1A-228ENST00000636610 MANBALQ9NQG1 85 aa11.61□□□□□ -0.55
CACNA1A-228ENST00000636610 APC2O95996 2303 aa11.61□□□□□ -0.55
CACNA1A-228ENST00000636610 IGKV3-15P01624 115 aa11.6□□□□□ -0.55
CACNA1A-228ENST00000636610 CBLN1P23435 193 aa11.6□□□□□ -0.55
CACNA1A-228ENST00000636610 ERVK-16P61578 105 aa11.6□□□□□ -0.55
CACNA1A-228ENST00000636610 PKIAP61925 76 aa11.6□□□□□ -0.55
CACNA1A-228ENST00000636610 HLA-DRB5Q30154 266 aa11.6□□□□□ -0.55
CACNA1A-228ENST00000636610 ZGRF1Q86YA3 2104 aa11.6□□□□□ -0.55
CACNA1A-228ENST00000636610 AHRRA9YTQ3 701 aa11.6□□□□□ -0.55
CACNA1A-228ENST00000636610 ZBTB34Q8NCN2 500 aa11.6□□□□□ -0.55
CACNA1A-228ENST00000636610 FAM216AQ8WUB2 273 aa11.6□□□□□ -0.55
CACNA1A-228ENST00000636610 YTHDF2Q9Y5A9 579 aaKnown RBP11.6□□□□□ -0.55
CACNA1A-228ENST00000636610 TRIP6Q15654 476 aaKnown RBP11.6□□□□□ -0.55
CACNA1A-228ENST00000636610 GCSAMQ8N6F7 178 aa11.6□□□□□ -0.55
CACNA1A-228ENST00000636610 DEFB124Q8NES8 71 aa11.6□□□□□ -0.55
CACNA1A-228ENST00000636610 OR4P4Q8NGL7 312 aa11.6□□□□□ -0.55
CACNA1A-228ENST00000636610 OCC1Q8TAD7 63 aa11.6□□□□□ -0.55
CACNA1A-228ENST00000636610 LRFN3Q9BTN0 628 aa11.6□□□□□ -0.55
CACNA1A-228ENST00000636610 WDR83OSQ9Y284 106 aa11.6□□□□□ -0.55
CACNA1A-228ENST00000636610 GATCO43716 136 aaKnown RBP11.59□□□□□ -0.55
CACNA1A-228ENST00000636610 ITLN1Q8WWA0 313 aa11.59□□□□□ -0.55
CACNA1A-228ENST00000636610 TCF19Q9Y242 345 aa11.59□□□□□ -0.55
CACNA1A-228ENST00000636610 F6UZH7 168 aa11.59□□□□□ -0.55
CACNA1A-228ENST00000636610 OR10J4P0C629 311 aa11.59□□□□□ -0.55
CACNA1A-228ENST00000636610 JOSD1Q15040 202 aaPredicted RBP11.59□□□□□ -0.55
CACNA1A-228ENST00000636610 TANC2Q9HCD6 1990 aa11.59□□□□□ -0.55
CACNA1A-228ENST00000636610 GFRA3O60609 400 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms