RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 PRDM13Q9H4Q3 707 aa5.23□□□□□ -1.57
SCN1A-212ENST00000636194 DNAJC4Q9NNZ3 241 aa5.23□□□□□ -1.57
SCN1A-212ENST00000636194 PIEZO1Q92508 2521 aa5.23□□□□□ -1.57
SCN1A-212ENST00000636194 LOC105371242A0A075B767 164 aa5.23□□□□□ -1.57
SCN1A-212ENST00000636194 A0A0A6YYD4 124 aa5.23□□□□□ -1.57
SCN1A-212ENST00000636194 FZD5Q13467 585 aa5.23□□□□□ -1.57
SCN1A-212ENST00000636194 ANXA2RQ3ZCQ2 193 aa5.23□□□□□ -1.57
SCN1A-212ENST00000636194 LDLRAD2Q5SZI1 272 aa5.23□□□□□ -1.57
SCN1A-212ENST00000636194 ZNF880Q6PDB4 577 aa5.23□□□□□ -1.57
SCN1A-212ENST00000636194 GCSAMQ8N6F7 178 aa5.23□□□□□ -1.57
SCN1A-212ENST00000636194 TTC9BQ8N6N2 239 aa5.23□□□□□ -1.57
SCN1A-212ENST00000636194 PLA2G3Q9NZ20 509 aa5.23□□□□□ -1.57
SCN1A-212ENST00000636194 RNF115Q9Y4L5 304 aa5.23□□□□□ -1.57
SCN1A-212ENST00000636194 CLDN16Q9Y5I7 305 aa5.23□□□□□ -1.57
SCN1A-212ENST00000636194 TMEM131LA2VDJ0 1609 aa5.23□□□□□ -1.57
SCN1A-212ENST00000636194 ANAPC1Q9H1A4 1944 aa5.23□□□□□ -1.57
SCN1A-212ENST00000636194 GREB1LQ9C091 1923 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-212ENST00000636194 TMEM238C9JI98 176 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 PYCARD-AS1I3L0S3 204 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 HBDP02042 147 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 VEGFBP49765 207 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 SMN1Q16637 294 aaKnown RBP5.22□□□□□ -1.57
SCN1A-212ENST00000636194 FGF11Q92914 225 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 TRAV8-1A0A0A6YYK1 113 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 ADARB2-AS1A8MUL3 147 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 LEPROTO15243 131 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 IL11P20809 199 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 OTX1P32242 354 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-212ENST00000636194 RIPPLY3P57055 190 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 NIT1Q86X76 327 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 TAF15Q92804 592 aaKnown RBP eCLIP5.22□□□□□ -1.57
SCN1A-212ENST00000636194 ABHD17AQ96GS6 310 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 R4GN57 208 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 TCRBV5S2A0A599 114 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 RNF222A6NCQ9 220 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 C22orf46C9J442 243 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 SP9P0CG40 484 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 CD68P34810 354 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-212ENST00000636194 C4orf48Q5BLP8 95 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 THAP8Q8NA92 274 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 SIGMAR1Q99720 223 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 CEP192Q8TEP8 1941 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 CXorf65A6NEN9 183 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 SMAD7O15105 426 aaKnown RBP5.22□□□□□ -1.57
SCN1A-212ENST00000636194 PAX4O43316 350 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 NDUFA3O95167 84 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 RAE1P78406 368 aaKnown RBP5.22□□□□□ -1.57
SCN1A-212ENST00000636194 TMEM91Q6ZNR0 172 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 RTN4RL2Q86UN3 420 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 MRGPRFQ96AM1 343 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 HSPB9Q9BQS6 159 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 KCPQ6ZWJ8 1503 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 ACANP16112 2415 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 DSPPQ9NZW4 1301 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 UPK2O00526 184 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 PLPP2O43688 288 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 PFN3P60673 137 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 ZNF645Q8N7E2 425 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 AJAP1Q9UKB5 411 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-212ENST00000636194 COL2A1P02458 1487 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-212ENST00000636194 NPIPB11E5RHQ5 1161 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 ZNF117Q03924 483 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 AWAT1Q58HT5 328 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 IGHV3-21A0A0B4J1V1 117 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 PPYP01298 95 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 IFITM2Q01629 132 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 PRSS36Q5K4E3 855 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 C8orf31Q8N9H6 132 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 OR10S1Q8NGN2 331 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 C1QTNF4Q9BXJ3 329 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 CLEC7AQ9BXN2 247 aa5.22□□□□□ -1.57
SCN1A-212ENST00000636194 TRGV3P03979 118 aa5.21□□□□□ -1.57
SCN1A-212ENST00000636194 OR52E5Q8NH55 327 aa5.21□□□□□ -1.57
SCN1A-212ENST00000636194 CACNG8Q8WXS5 425 aa5.21□□□□□ -1.57
SCN1A-212ENST00000636194 SIRT4Q9Y6E7 314 aaPredicted RBP5.21□□□□□ -1.57
SCN1A-212ENST00000636194 WNT1P04628 370 aa5.21□□□□□ -1.58
SCN1A-212ENST00000636194 CA7P43166 264 aa5.21□□□□□ -1.58
SCN1A-212ENST00000636194 UNC119Q13432 240 aa5.21□□□□□ -1.58
SCN1A-212ENST00000636194 NT5CQ8TCD5 201 aa5.21□□□□□ -1.58
SCN1A-212ENST00000636194 TMEM186Q96B77 213 aa5.21□□□□□ -1.58
SCN1A-212ENST00000636194 SCN7AQ01118 1682 aa5.21□□□□□ -1.58
SCN1A-212ENST00000636194 A0A1W2PR80 420 aa5.21□□□□□ -1.58
SCN1A-212ENST00000636194 M0R381 172 aa5.21□□□□□ -1.58
SCN1A-212ENST00000636194 BCL2P10415 239 aa5.21□□□□□ -1.58
SCN1A-212ENST00000636194 ST3GAL2Q16842 350 aa5.21□□□□□ -1.58
SCN1A-212ENST00000636194 DCAF10Q5QP82 559 aa5.21□□□□□ -1.58
SCN1A-212ENST00000636194 BHLHA9Q7RTU4 235 aa5.21□□□□□ -1.58
SCN1A-212ENST00000636194 RREB1Q92766 1687 aa5.21□□□□□ -1.58
SCN1A-212ENST00000636194 ANKRD39Q53RE8 183 aa5.21□□□□□ -1.58
SCN1A-212ENST00000636194 SPINK14Q6IE38 97 aa5.21□□□□□ -1.58
SCN1A-212ENST00000636194 HS3ST3B1Q9Y662 390 aa5.21□□□□□ -1.58
SCN1A-212ENST00000636194 PRSS21Q9Y6M0 314 aa5.21□□□□□ -1.58
SCN1A-212ENST00000636194 HCRTO43612 131 aa5.21□□□□□ -1.58
SCN1A-212ENST00000636194 DEFB103AP81534 67 aa5.21□□□□□ -1.58
SCN1A-212ENST00000636194 TMEM179BQ7Z7N9 219 aa5.21□□□□□ -1.58
SCN1A-212ENST00000636194 ZNF784Q8NCA9 323 aaPredicted RBP5.21□□□□□ -1.58
SCN1A-212ENST00000636194 FAM168AQ92567 244 aa5.21□□□□□ -1.58
SCN1A-212ENST00000636194 FMC1Q96HJ9 113 aa5.21□□□□□ -1.58
SCN1A-212ENST00000636194 BCL2L10Q9HD36 194 aa5.21□□□□□ -1.58
SCN1A-212ENST00000636194 TRGV11A0A075B6L2 103 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms