RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 PRR7Q8TB68 274 aa12.31□□□□□ -0.44
CACNA1A-220ENST00000635988 MRGPRDQ8TDS7 321 aa12.31□□□□□ -0.44
CACNA1A-220ENST00000635988 SLC35E1Q96K37 410 aa12.31□□□□□ -0.44
CACNA1A-220ENST00000635988 UQCR10Q9UDW1 63 aa12.31□□□□□ -0.44
CACNA1A-220ENST00000635988 ESPL1Q14674 2120 aa12.31□□□□□ -0.44
CACNA1A-220ENST00000635988 PRSS46E5RG02 174 aa12.31□□□□□ -0.44
CACNA1A-220ENST00000635988 RRHO14718 337 aa12.31□□□□□ -0.44
CACNA1A-220ENST00000635988 REG1AP05451 166 aa12.31□□□□□ -0.44
CACNA1A-220ENST00000635988 ADH4P08319 380 aa12.31□□□□□ -0.44
CACNA1A-220ENST00000635988 CELA3AP09093 270 aa12.31□□□□□ -0.44
CACNA1A-220ENST00000635988 CEBPDP49716 269 aaPredicted RBP12.31□□□□□ -0.44
CACNA1A-220ENST00000635988 PSG7Q13046 419 aa12.31□□□□□ -0.44
CACNA1A-220ENST00000635988 RAB31Q13636 194 aa12.31□□□□□ -0.44
CACNA1A-220ENST00000635988 TRAT1Q6PIZ9 186 aa12.31□□□□□ -0.44
CACNA1A-220ENST00000635988 FAM216AQ8WUB2 273 aa12.31□□□□□ -0.44
CACNA1A-220ENST00000635988 GNB4Q9HAV0 340 aa12.31□□□□□ -0.44
CACNA1A-220ENST00000635988 FSCN3Q9NQT6 498 aa12.31□□□□□ -0.44
CACNA1A-220ENST00000635988 FBXL7Q9UJT9 491 aa12.31□□□□□ -0.44
CACNA1A-220ENST00000635988 DOCK11Q5JSL3 2073 aa12.31□□□□□ -0.44
CACNA1A-220ENST00000635988 IQCF6A8MYZ5 107 aa12.3□□□□□ -0.44
CACNA1A-220ENST00000635988 SMPD2O60906 423 aa12.3□□□□□ -0.44
CACNA1A-220ENST00000635988 TNFSF15O95150 251 aa12.3□□□□□ -0.44
CACNA1A-220ENST00000635988 VDAC2P45880 294 aaPredicted RBP12.3□□□□□ -0.44
CACNA1A-220ENST00000635988 ERVK-16P61578 105 aa12.3□□□□□ -0.44
CACNA1A-220ENST00000635988 DMRTA1Q5VZB9 504 aa12.3□□□□□ -0.44
CACNA1A-220ENST00000635988 COQ2Q96H96 371 aa12.3□□□□□ -0.44
CACNA1A-220ENST00000635988 PSG11Q9UQ72 335 aa12.3□□□□□ -0.44
CACNA1A-220ENST00000635988 LSM4Q9Y4Z0 139 aaKnown RBP12.3□□□□□ -0.44
CACNA1A-220ENST00000635988 V9GYV3 84 aa12.3□□□□□ -0.44
CACNA1A-220ENST00000635988 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.3□□□□□ -0.44
CACNA1A-220ENST00000635988 AQP7O14520 342 aa12.3□□□□□ -0.44
CACNA1A-220ENST00000635988 SPINT2O43291 252 aa12.3□□□□□ -0.44
CACNA1A-220ENST00000635988 ZNF253O75346 499 aa12.3□□□□□ -0.44
CACNA1A-220ENST00000635988 OR5G3P0C626 314 aa12.3□□□□□ -0.44
CACNA1A-220ENST00000635988 CTRLP40313 264 aa12.3□□□□□ -0.44
CACNA1A-220ENST00000635988 CX3CL1P78423 397 aa12.3□□□□□ -0.44
CACNA1A-220ENST00000635988 EFNB3Q15768 340 aa12.3□□□□□ -0.44
CACNA1A-220ENST00000635988 FBXW9Q5XUX1 488 aa12.3□□□□□ -0.44
CACNA1A-220ENST00000635988 KCNS1Q96KK3 526 aa12.3□□□□□ -0.44
CACNA1A-220ENST00000635988 MSL2Q9HCI7 577 aa12.3□□□□□ -0.44
CACNA1A-220ENST00000635988 NAT8BQ9UHF3 227 aa12.3□□□□□ -0.44
CACNA1A-220ENST00000635988 TBL2Q9Y4P3 447 aaKnown RBP12.3□□□□□ -0.44
CACNA1A-220ENST00000635988 SPEGQ15772 3267 aa12.29□□□□□ -0.44
CACNA1A-220ENST00000635988 SIAH2O43255 324 aa12.29□□□□□ -0.44
CACNA1A-220ENST00000635988 GFRA3O60609 400 aa12.29□□□□□ -0.44
CACNA1A-220ENST00000635988 CHRNB4P30926 498 aa12.29□□□□□ -0.44
CACNA1A-220ENST00000635988 FOXF2Q12947 444 aa12.29□□□□□ -0.44
CACNA1A-220ENST00000635988 SPATA45Q537H7 98 aa12.29□□□□□ -0.44
CACNA1A-220ENST00000635988 FAM53AQ6NSI3 398 aaPredicted RBP12.29□□□□□ -0.44
CACNA1A-220ENST00000635988 GCNT2Q8N0V5 402 aa12.29□□□□□ -0.44
CACNA1A-220ENST00000635988 NRN1Q9NPD7 142 aa12.29□□□□□ -0.44
CACNA1A-220ENST00000635988 DUTP33316 252 aaKnown RBP12.29□□□□□ -0.44
CACNA1A-220ENST00000635988 AMTP48728 403 aa12.29□□□□□ -0.44
CACNA1A-220ENST00000635988 ZXDAP98168 799 aa12.29□□□□□ -0.44
CACNA1A-220ENST00000635988 OR8I2Q8N0Y5 310 aa12.29□□□□□ -0.44
CACNA1A-220ENST00000635988 C11orf42Q8N5U0 333 aa12.29□□□□□ -0.44
CACNA1A-220ENST00000635988 KLHDC1Q8N7A1 406 aa12.29□□□□□ -0.44
CACNA1A-220ENST00000635988 Q8N976 141 aa12.29□□□□□ -0.44
CACNA1A-220ENST00000635988 PILRBQ9UKJ0 227 aa12.29□□□□□ -0.44
CACNA1A-220ENST00000635988 LOXL2Q9Y4K0 774 aa12.29□□□□□ -0.44
CACNA1A-220ENST00000635988 F2Z2F3 143 aa12.28□□□□□ -0.44
CACNA1A-220ENST00000635988 FCGR3BO75015 233 aa12.28□□□□□ -0.44
CACNA1A-220ENST00000635988 MAGEA5P43359 124 aa12.28□□□□□ -0.44
CACNA1A-220ENST00000635988 GPR12P47775 334 aa12.28□□□□□ -0.44
CACNA1A-220ENST00000635988 GNG4P50150 75 aa12.28□□□□□ -0.44
CACNA1A-220ENST00000635988 ABHD17BQ5VST6 288 aa12.28□□□□□ -0.44
CACNA1A-220ENST00000635988 TEPPQ6URK8 271 aa12.28□□□□□ -0.44
CACNA1A-220ENST00000635988 STARD4Q96DR4 205 aa12.28□□□□□ -0.44
CACNA1A-220ENST00000635988 FAM103A1Q9BTL3 118 aaKnown RBP12.28□□□□□ -0.44
CACNA1A-220ENST00000635988 TTTY12Q9BZ98 90 aa12.28□□□□□ -0.44
CACNA1A-220ENST00000635988 OSTCQ9NRP0 149 aa12.28□□□□□ -0.44
CACNA1A-220ENST00000635988 R4GN57 208 aa12.28□□□□□ -0.44
CACNA1A-220ENST00000635988 MED12LQ86YW9 2145 aa12.28□□□□□ -0.44
CACNA1A-220ENST00000635988 TRGV8A0A0C4DH27 118 aa12.28□□□□□ -0.44
CACNA1A-220ENST00000635988 FAM166BA8MTA8 275 aa12.28□□□□□ -0.44
CACNA1A-220ENST00000635988 COTL1Q14019 142 aa12.28□□□□□ -0.44
CACNA1A-220ENST00000635988 ST6GALNAC3Q8NDV1 305 aa12.28□□□□□ -0.44
CACNA1A-220ENST00000635988 CORO2AQ92828 525 aa12.28□□□□□ -0.44
CACNA1A-220ENST00000635988 C12orf49Q9H741 205 aa12.28□□□□□ -0.44
CACNA1A-220ENST00000635988 DNAJC4Q9NNZ3 241 aa12.28□□□□□ -0.44
CACNA1A-220ENST00000635988 ABI3Q9P2A4 366 aa12.28□□□□□ -0.44
CACNA1A-220ENST00000635988 SLC25A10Q9UBX3 287 aaPredicted RBP12.28□□□□□ -0.44
CACNA1A-220ENST00000635988 HELTA6NFD8 242 aa12.27□□□□□ -0.45
CACNA1A-220ENST00000635988 SSTR5P35346 364 aa12.27□□□□□ -0.45
CACNA1A-220ENST00000635988 ACP7Q6ZNF0 438 aa12.27□□□□□ -0.45
CACNA1A-220ENST00000635988 STPG3Q8N7X2 389 aa12.27□□□□□ -0.45
CACNA1A-220ENST00000635988 SLC25A40Q8TBP6 338 aa12.27□□□□□ -0.45
CACNA1A-220ENST00000635988 CT55Q8WUE5 264 aa12.27□□□□□ -0.45
CACNA1A-220ENST00000635988 SSMEM1Q8WWF3 244 aa12.27□□□□□ -0.45
CACNA1A-220ENST00000635988 TXN2Q99757 166 aa12.27□□□□□ -0.45
CACNA1A-220ENST00000635988 SEPSECSQ9HD40 501 aaKnown RBP12.27□□□□□ -0.45
CACNA1A-220ENST00000635988 TMEM167BQ9NRX6 74 aa12.27□□□□□ -0.45
CACNA1A-220ENST00000635988 USF3Q68DE3 2245 aa12.27□□□□□ -0.45
CACNA1A-220ENST00000635988 HLA-DQA1P01909 254 aa12.27□□□□□ -0.45
CACNA1A-220ENST00000635988 IGLC2P0DOY2 106 aa12.27□□□□□ -0.45
CACNA1A-220ENST00000635988 IGLC3P0DOY3 106 aa12.27□□□□□ -0.45
CACNA1A-220ENST00000635988 IGFBP4P22692 258 aa12.27□□□□□ -0.45
CACNA1A-220ENST00000635988 LINC00205P59089 165 aa12.27□□□□□ -0.45
CACNA1A-220ENST00000635988 C6orf15Q6UXA7 325 aaPredicted RBP12.27□□□□□ -0.45
CACNA1A-220ENST00000635988 C19orf35Q6ZS72 473 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms