RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 TAS2R19P59542 299 aa12.09□□□□□ -0.47
LINC00339-209ENST00000635450 SSBP2P81877 361 aaPredicted RBP12.09□□□□□ -0.47
LINC00339-209ENST00000635450 SSBP1Q04837 148 aaKnown RBP12.09□□□□□ -0.47
LINC00339-209ENST00000635450 VKORC1L1Q8N0U8 176 aa12.09□□□□□ -0.47
LINC00339-209ENST00000635450 SRSF12Q8WXF0 261 aaKnown RBP12.09□□□□□ -0.47
LINC00339-209ENST00000635450 RHOVQ96L33 236 aa12.09□□□□□ -0.47
LINC00339-209ENST00000635450 OR2A7Q96R45 310 aa12.09□□□□□ -0.47
LINC00339-209ENST00000635450 ZNF430Q9H8G1 570 aaPredicted RBP12.09□□□□□ -0.47
LINC00339-209ENST00000635450 RAMP3O60896 148 aa12.08□□□□□ -0.48
LINC00339-209ENST00000635450 KBTBD11O94819 623 aa12.08□□□□□ -0.48
LINC00339-209ENST00000635450 RLN1P04808 185 aa12.08□□□□□ -0.48
LINC00339-209ENST00000635450 BRWD1-AS2P59051 145 aa12.08□□□□□ -0.48
LINC00339-209ENST00000635450 TPPP2P59282 170 aa12.08□□□□□ -0.48
LINC00339-209ENST00000635450 DGCR2P98153 550 aa12.08□□□□□ -0.48
LINC00339-209ENST00000635450 SSX9Q7RTT3 188 aa12.08□□□□□ -0.48
LINC00339-209ENST00000635450 ARRDC1Q8N5I2 433 aa12.08□□□□□ -0.48
LINC00339-209ENST00000635450 TMEM229BQ8NBD8 167 aa12.08□□□□□ -0.48
LINC00339-209ENST00000635450 OR5T1Q8NG75 326 aa12.08□□□□□ -0.48
LINC00339-209ENST00000635450 CASTOR1Q8WTX7 329 aa12.08□□□□□ -0.48
LINC00339-209ENST00000635450 MS4A10Q96PG2 267 aa12.08□□□□□ -0.48
LINC00339-209ENST00000635450 SPIN2AQ99865 258 aa12.08□□□□□ -0.48
LINC00339-209ENST00000635450 SPIN2BQ9BPZ2 258 aa12.08□□□□□ -0.48
LINC00339-209ENST00000635450 GNB4Q9HAV0 340 aa12.08□□□□□ -0.48
LINC00339-209ENST00000635450 MSGN1A6NI15 193 aa12.07□□□□□ -0.48
LINC00339-209ENST00000635450 H3BUA1 57 aa12.07□□□□□ -0.48
LINC00339-209ENST00000635450 CTDSPLO15194 276 aa12.07□□□□□ -0.48
LINC00339-209ENST00000635450 PGLYRP1O75594 196 aaPredicted RBP12.07□□□□□ -0.48
LINC00339-209ENST00000635450 TRGV3P03979 118 aa12.07□□□□□ -0.48
LINC00339-209ENST00000635450 CD3DP04234 171 aa12.07□□□□□ -0.48
LINC00339-209ENST00000635450 NQO2P16083 231 aa12.07□□□□□ -0.48
LINC00339-209ENST00000635450 F2RP25116 425 aa12.07□□□□□ -0.48
LINC00339-209ENST00000635450 MAS1LP35410 378 aa12.07□□□□□ -0.48
LINC00339-209ENST00000635450 UCP3P55916 312 aa12.07□□□□□ -0.48
LINC00339-209ENST00000635450 TAS2R31P59538 309 aa12.07□□□□□ -0.48
LINC00339-209ENST00000635450 KIAA0141Q14154 515 aaPredicted RBP12.07□□□□□ -0.48
LINC00339-209ENST00000635450 MRGPRG-AS1Q2M3A8 158 aa12.07□□□□□ -0.48
LINC00339-209ENST00000635450 DEFB121Q5J5C9 76 aa12.07□□□□□ -0.48
LINC00339-209ENST00000635450 ASPHD1Q5U4P2 390 aa12.07□□□□□ -0.48
LINC00339-209ENST00000635450 SLC38A6Q8IZM9 456 aa12.07□□□□□ -0.48
LINC00339-209ENST00000635450 PUSL1Q8N0Z8 303 aaKnown RBP12.07□□□□□ -0.48
LINC00339-209ENST00000635450 DMBX1Q8NFW5 382 aa12.07□□□□□ -0.48
LINC00339-209ENST00000635450 OR11H1Q8NG94 326 aa12.07□□□□□ -0.48
LINC00339-209ENST00000635450 TMEM167AQ8TBQ9 72 aa12.07□□□□□ -0.48
LINC00339-209ENST00000635450 SMIM4Q8WVI0 70 aa12.07□□□□□ -0.48
LINC00339-209ENST00000635450 OR5B12Q96R08 314 aa12.07□□□□□ -0.48
LINC00339-209ENST00000635450 MCRIP2Q9BUT9 160 aaKnown RBP12.07□□□□□ -0.48
LINC00339-209ENST00000635450 GPR61Q9BZJ8 451 aa12.07□□□□□ -0.48
LINC00339-209ENST00000635450 TINAGL1Q9GZM7 467 aaPredicted RBP12.07□□□□□ -0.48
LINC00339-209ENST00000635450 NXF2Q9GZY0 626 aaKnown RBP12.07□□□□□ -0.48
LINC00339-209ENST00000635450 HRASLSQ9HDD0 168 aa12.07□□□□□ -0.48
LINC00339-209ENST00000635450 FABP12A6NFH5 140 aa12.06□□□□□ -0.48
LINC00339-209ENST00000635450 ZNF701M0R085 212 aaPredicted RBP12.06□□□□□ -0.48
LINC00339-209ENST00000635450 RAB3DO95716 219 aa12.06□□□□□ -0.48
LINC00339-209ENST00000635450 APELAP0DMC3 54 aa12.06□□□□□ -0.48
LINC00339-209ENST00000635450 PGAM2P15259 253 aa12.06□□□□□ -0.48
LINC00339-209ENST00000635450 TNFSF8P32971 234 aa12.06□□□□□ -0.48
LINC00339-209ENST00000635450 ERVK-16P61578 105 aa12.06□□□□□ -0.48
LINC00339-209ENST00000635450 RUNX1Q01196 453 aa12.06□□□□□ -0.48
LINC00339-209ENST00000635450 PHLDA2Q53GA4 152 aa12.06□□□□□ -0.48
LINC00339-209ENST00000635450 OR4A47Q6IF82 309 aa12.06□□□□□ -0.48
LINC00339-209ENST00000635450 STEAP1BQ6NZ63 245 aa12.06□□□□□ -0.48
LINC00339-209ENST00000635450 OR4A5Q8NH83 315 aa12.06□□□□□ -0.48
LINC00339-209ENST00000635450 DPF1Q92782 380 aa12.06□□□□□ -0.48
LINC00339-209ENST00000635450 DGCR14Q96DF8 476 aaKnown RBP12.06□□□□□ -0.48
LINC00339-209ENST00000635450 RSRP1Q9BUV0 290 aa12.06□□□□□ -0.48
LINC00339-209ENST00000635450 PLEKHA2Q9HB19 425 aa12.06□□□□□ -0.48
LINC00339-209ENST00000635450 COA4Q9NYJ1 87 aa12.06□□□□□ -0.48
LINC00339-209ENST00000635450 BET1LQ9NYM9 111 aa12.06□□□□□ -0.48
LINC00339-209ENST00000635450 COMMD9Q9P000 198 aa12.06□□□□□ -0.48
LINC00339-209ENST00000635450 KMT2CQ8NEZ4 4911 aaKnown RBP12.05□□□□□ -0.48
LINC00339-209ENST00000635450 NBEAL2Q6ZNJ1 2754 aa12.05□□□□□ -0.48
LINC00339-209ENST00000635450 I3L521 148 aa12.05□□□□□ -0.48
LINC00339-209ENST00000635450 S1PR2O95136 353 aa12.05□□□□□ -0.48
LINC00339-209ENST00000635450 S100A5P33763 92 aa12.05□□□□□ -0.48
LINC00339-209ENST00000635450 RPL27AP46776 148 aaKnown RBP12.05□□□□□ -0.48
LINC00339-209ENST00000635450 RPL8P62917 257 aaKnown RBP12.05□□□□□ -0.48
LINC00339-209ENST00000635450 ZNF616Q08AN1 781 aa12.05□□□□□ -0.48
LINC00339-209ENST00000635450 FHL3Q13643 280 aa12.05□□□□□ -0.48
LINC00339-209ENST00000635450 MEF2DQ14814 521 aa12.05□□□□□ -0.48
LINC00339-209ENST00000635450 OR1N2Q8NGR9 330 aa12.05□□□□□ -0.48
LINC00339-209ENST00000635450 RBM38Q9H0Z9 239 aaKnown RBP12.05□□□□□ -0.48
LINC00339-209ENST00000635450 A0A0G2JLM5 398 aa12.04□□□□□ -0.48
LINC00339-209ENST00000635450 C13orf42A0A1B0GVH6 325 aa12.04□□□□□ -0.48
LINC00339-209ENST00000635450 DPPA5A6NC42 116 aa12.04□□□□□ -0.48
LINC00339-209ENST00000635450 CD74P04233 296 aa12.04□□□□□ -0.48
LINC00339-209ENST00000635450 LGALS1P09382 135 aaKnown RBP12.04□□□□□ -0.48
LINC00339-209ENST00000635450 OR8U8P0C7N1 319 aa12.04□□□□□ -0.48
LINC00339-209ENST00000635450 OR9G9P0C7N8 305 aa12.04□□□□□ -0.48
LINC00339-209ENST00000635450 LPAR6P43657 344 aa12.04□□□□□ -0.48
LINC00339-209ENST00000635450 POU2AF1Q16633 256 aa12.04□□□□□ -0.48
LINC00339-209ENST00000635450 SCGB2B2Q4G0G5 96 aa12.04□□□□□ -0.48
LINC00339-209ENST00000635450 SLC25A42Q86VD7 318 aa12.04□□□□□ -0.48
LINC00339-209ENST00000635450 ZNF486Q96H40 463 aaPredicted RBP12.04□□□□□ -0.48
LINC00339-209ENST00000635450 FYTTD1Q96QD9 318 aaKnown RBP12.04□□□□□ -0.48
LINC00339-209ENST00000635450 PRR25Q96S07 402 aa12.04□□□□□ -0.48
LINC00339-209ENST00000635450 ALX4Q9H161 411 aaPredicted RBP12.04□□□□□ -0.48
LINC00339-209ENST00000635450 SORL1Q92673 2214 aa12.03□□□□□ -0.48
LINC00339-209ENST00000635450 TENM3Q9P273 2699 aa12.03□□□□□ -0.48
LINC00339-209ENST00000635450 DISC1C4P0D8 188 aa12.03□□□□□ -0.48
LINC00339-209ENST00000635450 BRI3O95415 125 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms