RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 HRASLSQ9HDD0 168 aa12.17□□□□□ -0.46
LINC00339-207ENST00000634712 SCOCQ9UIL1 159 aa12.17□□□□□ -0.46
LINC00339-207ENST00000634712 SEC14L6B5MCN3 397 aa12.16□□□□□ -0.46
LINC00339-207ENST00000634712 GPR31O00270 319 aa12.16□□□□□ -0.46
LINC00339-207ENST00000634712 RAMP3O60896 148 aa12.16□□□□□ -0.46
LINC00339-207ENST00000634712 HSPB1P04792 205 aaKnown RBP12.16□□□□□ -0.46
LINC00339-207ENST00000634712 OR9G9P0C7N8 305 aa12.16□□□□□ -0.46
LINC00339-207ENST00000634712 MAS1LP35410 378 aa12.16□□□□□ -0.46
LINC00339-207ENST00000634712 TAS2R31P59538 309 aa12.16□□□□□ -0.46
LINC00339-207ENST00000634712 ASPHD1Q5U4P2 390 aa12.16□□□□□ -0.46
LINC00339-207ENST00000634712 PUSL1Q8N0Z8 303 aaKnown RBP12.16□□□□□ -0.46
LINC00339-207ENST00000634712 TMEM167AQ8TBQ9 72 aa12.16□□□□□ -0.46
LINC00339-207ENST00000634712 FCAMRQ8WWV6 532 aa12.16□□□□□ -0.46
LINC00339-207ENST00000634712 TNCP24821 2201 aa12.15□□□□□ -0.46
LINC00339-207ENST00000634712 DPPA5A6NC42 116 aa12.15□□□□□ -0.46
LINC00339-207ENST00000634712 CTDSP2O14595 271 aa12.15□□□□□ -0.46
LINC00339-207ENST00000634712 PGLYRP1O75594 196 aaPredicted RBP12.15□□□□□ -0.46
LINC00339-207ENST00000634712 RLN1P04808 185 aa12.15□□□□□ -0.46
LINC00339-207ENST00000634712 NQO2P16083 231 aa12.15□□□□□ -0.46
LINC00339-207ENST00000634712 SLC25A42Q86VD7 318 aa12.15□□□□□ -0.46
LINC00339-207ENST00000634712 DMBX1Q8NFW5 382 aa12.15□□□□□ -0.46
LINC00339-207ENST00000634712 OR52I2Q8NH67 350 aa12.15□□□□□ -0.46
LINC00339-207ENST00000634712 OR4A5Q8NH83 315 aa12.15□□□□□ -0.46
LINC00339-207ENST00000634712 FYTTD1Q96QD9 318 aaKnown RBP12.15□□□□□ -0.46
LINC00339-207ENST00000634712 TINAGL1Q9GZM7 467 aaPredicted RBP12.15□□□□□ -0.46
LINC00339-207ENST00000634712 CCDC59Q9P031 241 aaKnown RBP12.15□□□□□ -0.46
LINC00339-207ENST00000634712 KLK11Q9UBX7 282 aa12.15□□□□□ -0.46
LINC00339-207ENST00000634712 IGHV4OR15-8A0A075B7B6 117 aa12.14□□□□□ -0.47
LINC00339-207ENST00000634712 A0A087WW49 117 aa12.14□□□□□ -0.47
LINC00339-207ENST00000634712 OVOL1O14753 267 aa12.14□□□□□ -0.47
LINC00339-207ENST00000634712 RPL27AP46776 148 aaKnown RBP12.14□□□□□ -0.47
LINC00339-207ENST00000634712 KRTAP10-11P60412 298 aa12.14□□□□□ -0.47
LINC00339-207ENST00000634712 ERVK-16P61578 105 aa12.14□□□□□ -0.47
LINC00339-207ENST00000634712 RPL8P62917 257 aaKnown RBP12.14□□□□□ -0.47
LINC00339-207ENST00000634712 EGFEM1PQ0D2K5 195 aa12.14□□□□□ -0.47
LINC00339-207ENST00000634712 RNASE10Q5GAN6 216 aaKnown RBP12.14□□□□□ -0.47
LINC00339-207ENST00000634712 C10orf55Q5SWW7 151 aa12.14□□□□□ -0.47
LINC00339-207ENST00000634712 OR4A47Q6IF82 309 aa12.14□□□□□ -0.47
LINC00339-207ENST00000634712 LAX1Q8IWV1 398 aa12.14□□□□□ -0.47
LINC00339-207ENST00000634712 DYNC2LI1Q8TCX1 351 aa12.14□□□□□ -0.47
LINC00339-207ENST00000634712 DCUN1D4Q92564 292 aa12.14□□□□□ -0.47
LINC00339-207ENST00000634712 DIRAS2Q96HU8 199 aa12.14□□□□□ -0.47
LINC00339-207ENST00000634712 USMG5Q96IX5 58 aa12.14□□□□□ -0.47
LINC00339-207ENST00000634712 ABHD1Q96SE0 405 aa12.14□□□□□ -0.47
LINC00339-207ENST00000634712 FXYD6Q9H0Q3 95 aa12.14□□□□□ -0.47
LINC00339-207ENST00000634712 MIXL1Q9H2W2 232 aa12.14□□□□□ -0.47
LINC00339-207ENST00000634712 PLEKHA2Q9HB19 425 aa12.14□□□□□ -0.47
LINC00339-207ENST00000634712 RANGRFQ9HD47 186 aaPredicted RBP12.14□□□□□ -0.47
LINC00339-207ENST00000634712 BET1LQ9NYM9 111 aa12.14□□□□□ -0.47
LINC00339-207ENST00000634712 CCDC160A6NGH7 325 aa12.13□□□□□ -0.47
LINC00339-207ENST00000634712 M0QYG6 137 aa12.13□□□□□ -0.47
LINC00339-207ENST00000634712 BRI3O95415 125 aa12.13□□□□□ -0.47
LINC00339-207ENST00000634712 F2RP25116 425 aa12.13□□□□□ -0.47
LINC00339-207ENST00000634712 SLURP1P55000 103 aa12.13□□□□□ -0.47
LINC00339-207ENST00000634712 DGCR2P98153 550 aa12.13□□□□□ -0.47
LINC00339-207ENST00000634712 PHLDA2Q53GA4 152 aa12.13□□□□□ -0.47
LINC00339-207ENST00000634712 VAX1Q5SQQ9 334 aa12.13□□□□□ -0.47
LINC00339-207ENST00000634712 TTC9CQ8N5M4 171 aa12.13□□□□□ -0.47
LINC00339-207ENST00000634712 ADAD2Q8NCV1 583 aaKnown RBP12.13□□□□□ -0.47
LINC00339-207ENST00000634712 ISOC1Q96CN7 298 aa12.13□□□□□ -0.47
LINC00339-207ENST00000634712 DGCR14Q96DF8 476 aaKnown RBP12.13□□□□□ -0.47
LINC00339-207ENST00000634712 C6orf62Q9GZU0 229 aaPredicted RBP12.13□□□□□ -0.47
LINC00339-207ENST00000634712 MTFP1Q9UDX5 166 aa12.13□□□□□ -0.47
LINC00339-207ENST00000634712 ANKRD34BA5PLL1 514 aa12.12□□□□□ -0.47
LINC00339-207ENST00000634712 HMX3A6NHT5 357 aa12.12□□□□□ -0.47
LINC00339-207ENST00000634712 H3BMQ9 156 aa12.12□□□□□ -0.47
LINC00339-207ENST00000634712 S1PR2O95136 353 aa12.12□□□□□ -0.47
LINC00339-207ENST00000634712 CD3DP04234 171 aa12.12□□□□□ -0.47
LINC00339-207ENST00000634712 HLA-GP17693 338 aa12.12□□□□□ -0.47
LINC00339-207ENST00000634712 TBPP20226 339 aa12.12□□□□□ -0.47
LINC00339-207ENST00000634712 LPAR6P43657 344 aa12.12□□□□□ -0.47
LINC00339-207ENST00000634712 INSL3P51460 131 aa12.12□□□□□ -0.47
LINC00339-207ENST00000634712 MRPS10P82664 201 aaKnown RBP12.12□□□□□ -0.47
LINC00339-207ENST00000634712 IL18Q14116 193 aa12.12□□□□□ -0.47
LINC00339-207ENST00000634712 DEFB121Q5J5C9 76 aa12.12□□□□□ -0.47
LINC00339-207ENST00000634712 SLC38A6Q8IZM9 456 aa12.12□□□□□ -0.47
LINC00339-207ENST00000634712 DLX4Q92988 240 aaPredicted RBP12.12□□□□□ -0.47
LINC00339-207ENST00000634712 COMMD9Q9P000 198 aa12.12□□□□□ -0.47
LINC00339-207ENST00000634712 RABL2AQ9UBK7 228 aaPredicted RBP12.12□□□□□ -0.47
LINC00339-207ENST00000634712 RABL2BQ9UNT1 228 aa12.12□□□□□ -0.47
LINC00339-207ENST00000634712 GABARAPH6UMI1 98 aa12.11□□□□□ -0.47
LINC00339-207ENST00000634712 DHFRP00374 187 aa12.11□□□□□ -0.47
LINC00339-207ENST00000634712 PGAM2P15259 253 aa12.11□□□□□ -0.47
LINC00339-207ENST00000634712 RPA2P15927 270 aa12.11□□□□□ -0.47
LINC00339-207ENST00000634712 ZP3P21754 424 aa12.11□□□□□ -0.47
LINC00339-207ENST00000634712 UCP3P55916 312 aa12.11□□□□□ -0.47
LINC00339-207ENST00000634712 TAS2R19P59542 299 aa12.11□□□□□ -0.47
LINC00339-207ENST00000634712 RHOGP84095 191 aa12.11□□□□□ -0.47
LINC00339-207ENST00000634712 ATP5G2Q06055 141 aa12.11□□□□□ -0.47
LINC00339-207ENST00000634712 POU2AF1Q16633 256 aa12.11□□□□□ -0.47
LINC00339-207ENST00000634712 TMEM229BQ8NBD8 167 aa12.11□□□□□ -0.47
LINC00339-207ENST00000634712 RSRP1Q9BUV0 290 aa12.11□□□□□ -0.47
LINC00339-207ENST00000634712 COMMD5Q9GZQ3 224 aa12.11□□□□□ -0.47
LINC00339-207ENST00000634712 SLC2A9Q9NRM0 540 aa12.11□□□□□ -0.47
LINC00339-207ENST00000634712 TMEM140Q9NV12 185 aa12.11□□□□□ -0.47
LINC00339-207ENST00000634712 FAM223BA6NKX1 122 aa12.1□□□□□ -0.47
LINC00339-207ENST00000634712 UPK2O00526 184 aa12.1□□□□□ -0.47
LINC00339-207ENST00000634712 SAP30O75446 220 aa12.1□□□□□ -0.47
LINC00339-207ENST00000634712 PRH1P02810 166 aa12.1□□□□□ -0.47
LINC00339-207ENST00000634712 IL6RP08887 468 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 191.3 ms