RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 FZD2Q14332 565 aa3.81□□□□□ -1.8
SDCBP-213ENST00000630925 Q6ZSN1 163 aa3.81□□□□□ -1.8
SDCBP-213ENST00000630925 OR51T1Q8NGJ9 327 aa3.81□□□□□ -1.8
SDCBP-213ENST00000630925 C11orf52Q96A22 123 aa3.81□□□□□ -1.8
SDCBP-213ENST00000630925 SIGLEC12Q96PQ1 595 aa3.81□□□□□ -1.8
SDCBP-213ENST00000630925 PARP11Q9NR21 331 aa3.81□□□□□ -1.8
SDCBP-213ENST00000630925 XCL2Q9UBD3 114 aa3.81□□□□□ -1.8
SDCBP-213ENST00000630925 KLF13Q9Y2Y9 288 aaPredicted RBP3.81□□□□□ -1.8
SDCBP-213ENST00000630925 NEUROG3Q9Y4Z2 214 aa3.81□□□□□ -1.8
SDCBP-213ENST00000630925 V9GY05 133 aa3.81□□□□□ -1.8
SDCBP-213ENST00000630925 TECTAO75443 2155 aa3.81□□□□□ -1.8
SDCBP-213ENST00000630925 ZNF106Q9H2Y7 1883 aaKnown RBP3.81□□□□□ -1.8
SDCBP-213ENST00000630925 ZZEF1O43149 2961 aa3.81□□□□□ -1.8
SDCBP-213ENST00000630925 MYH7P12883 1935 aa3.81□□□□□ -1.8
SDCBP-213ENST00000630925 ZNFX1Q9P2E3 1918 aaKnown RBP3.81□□□□□ -1.8
SDCBP-213ENST00000630925 HLA-DRB1P01911 266 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 LINC00694P0DN24 101 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 TAF6P49848 677 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 GNG4P50150 75 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 TMEM267Q0VDI3 215 aaPredicted RBP3.8□□□□□ -1.8
SDCBP-213ENST00000630925 MMDQ15546 238 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 FAM222AQ5U5X8 452 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 TMEM236Q5W0B7 351 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 UFSP1Q6NVU6 142 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 CLEC19AQ6UXS0 136 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 FBXW12Q6X9E4 464 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 NOTCH2NLQ7Z3S9 236 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 ANKRD29Q8N6D5 301 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 LINC00337Q8N6G1 96 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 ZNF114Q8NC26 417 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 NUP35Q8NFH5 326 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 TMEM106AQ96A25 262 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 GALNT14Q96FL9 552 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 DERL3Q96Q80 235 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 SLC25A31Q9H0C2 315 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 TMEM133Q9H2Q1 129 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 NAT8Q9UHE5 227 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 V9GYS6 101 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 COL4A4P53420 1690 aaPredicted RBP3.8□□□□□ -1.8
SDCBP-213ENST00000630925 hCG_1818297A0A087WSY0 165 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 TRAV4A0A0B4J268 109 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 A0A0B4J2A0 478 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 IGHV3-20A0A0C4DH32 117 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 A8MT66 165 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 RFXAPO00287 272 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 UBFD1O14562 309 aaKnown RBP3.8□□□□□ -1.8
SDCBP-213ENST00000630925 OVOL1O14753 267 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 PAX4O43316 350 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 RPS4Y1P22090 263 aaKnown RBP3.8□□□□□ -1.8
SDCBP-213ENST00000630925 BTCP35070 178 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 RPS23P62266 143 aaKnown RBP3.8□□□□□ -1.8
SDCBP-213ENST00000630925 C16orf72Q14CZ0 275 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 Q499Y3 187 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 GLT8D1Q68CQ7 371 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 C11orf71Q6IPW1 123 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 SBSNQ6UWP8 590 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 VN1R4Q7Z5H5 301 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 LHFPL1Q86WI0 220 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 LY6G5BQ8NDX9 201 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 OR11G2Q8NGC1 345 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 ZNF420Q8TAQ5 688 aaPredicted RBP3.8□□□□□ -1.8
SDCBP-213ENST00000630925 LRRC29Q8WV35 223 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 PP6455Q8WZ26 134 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 FXYD5Q96DB9 178 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 SLC35E1Q96K37 410 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 F2RL3Q96RI0 385 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 ZNF696Q9H7X3 374 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 KCNIP2Q9NS61 270 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 DEPPQ9NTK1 212 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 SHPKQ9UHJ6 478 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 SIGLEC7Q9Y286 467 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 PXMP4Q9Y6I8 212 aa3.8□□□□□ -1.8
SDCBP-213ENST00000630925 SIPA1L3O60292 1781 aaPredicted RBP3.8□□□□□ -1.8
SDCBP-213ENST00000630925 PLXNB2O15031 1838 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 GBF1Q92538 1859 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 DHRS12A0PJE2 317 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 C1orf196B1AJZ1 125 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 KLLNB2CW77 178 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 ZNF780AO75290 641 aaPredicted RBP3.79□□□□□ -1.8
SDCBP-213ENST00000630925 GYPCP04921 128 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 CT45A10P0DMU9 189 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 LPAR6P43657 344 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 TMEM241Q24JQ0 296 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 WDR59Q6PJI9 974 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 Q6ZPA2 131 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 LCNL1Q6ZST4 164 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 CLEC20AQ6ZU45 233 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.79□□□□□ -1.8
SDCBP-213ENST00000630925 OR52R1Q8NGF1 315 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 OR51A4Q8NGJ6 313 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 RBPMSQ93062 196 aaKnown RBP3.79□□□□□ -1.8
SDCBP-213ENST00000630925 SLAMF6Q96DU3 332 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 IGF2BP2-AS1Q96M15 143 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 SAMD10Q9BYL1 202 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 RNF122Q9H9V4 155 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 HEBP1Q9NRV9 189 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 MED9Q9NWA0 146 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 MARCH5Q9NX47 278 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 NUP98P52948 1817 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 PRRC2BQ5JSZ5 2229 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms