RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 IL6RP08887 468 aaPredicted RBP10.86□□□□□ -0.67
PNKP-218ENST00000625299 UCHL1P09936 223 aa10.86□□□□□ -0.67
PNKP-218ENST00000625299 DEFA4P12838 97 aa10.86□□□□□ -0.67
PNKP-218ENST00000625299 GPR183P32249 361 aa10.86□□□□□ -0.67
PNKP-218ENST00000625299 BPIFB6Q8NFQ5 453 aa10.86□□□□□ -0.67
PNKP-218ENST00000625299 OR5B3Q8NH48 314 aa10.86□□□□□ -0.67
PNKP-218ENST00000625299 TMEM203Q969S6 136 aa10.86□□□□□ -0.67
PNKP-218ENST00000625299 MRPL27Q9P0M9 148 aaKnown RBP10.86□□□□□ -0.67
PNKP-218ENST00000625299 PSORS1C1Q9UIG5 152 aa10.86□□□□□ -0.67
PNKP-218ENST00000625299 MRPS7Q9Y2R9 242 aaKnown RBP10.86□□□□□ -0.67
PNKP-218ENST00000625299 UFC1Q9Y3C8 167 aa10.86□□□□□ -0.67
PNKP-218ENST00000625299 KIR2DL5BA0A0G2JN68 375 aa10.85□□□□□ -0.67
PNKP-218ENST00000625299 KIR2DL5BA0A0G2JPC4 375 aa10.85□□□□□ -0.67
PNKP-218ENST00000625299 DENRO43583 198 aaKnown RBP10.85□□□□□ -0.67
PNKP-218ENST00000625299 KBTBD11O94819 623 aa10.85□□□□□ -0.67
PNKP-218ENST00000625299 S1PR2O95136 353 aa10.85□□□□□ -0.67
PNKP-218ENST00000625299 IFNA4P05014 189 aa10.85□□□□□ -0.67
PNKP-218ENST00000625299 C8orf88P0DMB2 117 aa10.85□□□□□ -0.67
PNKP-218ENST00000625299 CD37P11049 281 aa10.85□□□□□ -0.67
PNKP-218ENST00000625299 CRHBPP24387 322 aa10.85□□□□□ -0.67
PNKP-218ENST00000625299 PSMB6P28072 239 aa10.85□□□□□ -0.67
PNKP-218ENST00000625299 PSMD7P51665 324 aa10.85□□□□□ -0.67
PNKP-218ENST00000625299 PLA2G7Q13093 441 aa10.85□□□□□ -0.67
PNKP-218ENST00000625299 RBMS2Q15434 407 aaKnown RBP10.85□□□□□ -0.67
PNKP-218ENST00000625299 ODF3L2Q3SX64 289 aa10.85□□□□□ -0.67
PNKP-218ENST00000625299 KIR2DL5AQ8N109 375 aa10.85□□□□□ -0.67
PNKP-218ENST00000625299 KIR2DL5BQ8NHK3 375 aa10.85□□□□□ -0.67
PNKP-218ENST00000625299 C11orf45Q8TAV5 145 aa10.85□□□□□ -0.67
PNKP-218ENST00000625299 FAM3DQ96BQ1 224 aa10.85□□□□□ -0.67
PNKP-218ENST00000625299 RAB3CQ96E17 227 aa10.85□□□□□ -0.67
PNKP-218ENST00000625299 OR2A7Q96R45 310 aa10.85□□□□□ -0.67
PNKP-218ENST00000625299 MND1Q9BWT6 205 aa10.85□□□□□ -0.67
PNKP-218ENST00000625299 SLC2A9Q9NRM0 540 aa10.85□□□□□ -0.67
PNKP-218ENST00000625299 KCNK7Q9Y2U2 307 aa10.85□□□□□ -0.67
PNKP-218ENST00000625299 PRELID3BQ9Y3B1 194 aa10.85□□□□□ -0.67
PNKP-218ENST00000625299 TRBV7-1A0A0A6YYK4 115 aa10.84□□□□□ -0.67
PNKP-218ENST00000625299 A0A1B0GW64 132 aa10.84□□□□□ -0.67
PNKP-218ENST00000625299 CDK1P06493 297 aa10.84□□□□□ -0.67
PNKP-218ENST00000625299 RPA2P15927 270 aa10.84□□□□□ -0.67
PNKP-218ENST00000625299 HIST1H1BP16401 226 aaKnown RBP10.84□□□□□ -0.67
PNKP-218ENST00000625299 GNB3P16520 340 aa10.84□□□□□ -0.67
PNKP-218ENST00000625299 RPL30P62888 115 aaKnown RBP10.84□□□□□ -0.67
PNKP-218ENST00000625299 C2orf76Q3KRA6 126 aa10.84□□□□□ -0.67
PNKP-218ENST00000625299 LAIR2Q6ISS4 152 aa10.84□□□□□ -0.67
PNKP-218ENST00000625299 H1FOOQ8IZA3 346 aaPredicted RBP10.84□□□□□ -0.67
PNKP-218ENST00000625299 DHRSXQ8N5I4 330 aa10.84□□□□□ -0.67
PNKP-218ENST00000625299 ZNF645Q8N7E2 425 aa10.84□□□□□ -0.67
PNKP-218ENST00000625299 VSTM2AQ8TAG5 236 aa10.84□□□□□ -0.67
PNKP-218ENST00000625299 MFFQ9GZY8 342 aa10.84□□□□□ -0.67
PNKP-218ENST00000625299 C5orf66Q9H5L9 145 aa10.84□□□□□ -0.67
PNKP-218ENST00000625299 TMEM272A0A1B0GTI8 110 aa10.83□□□□□ -0.68
PNKP-218ENST00000625299 DIRAS3O95661 229 aa10.83□□□□□ -0.68
PNKP-218ENST00000625299 CRYGCP07315 174 aa10.83□□□□□ -0.68
PNKP-218ENST00000625299 ZNF735P0CB33 412 aa10.83□□□□□ -0.68
PNKP-218ENST00000625299 MYOD1P15172 320 aa10.83□□□□□ -0.68
PNKP-218ENST00000625299 CD36P16671 472 aa10.83□□□□□ -0.68
PNKP-218ENST00000625299 GALP22466 123 aa10.83□□□□□ -0.68
PNKP-218ENST00000625299 TALDO1P37837 337 aa10.83□□□□□ -0.68
PNKP-218ENST00000625299 ARFRP1Q13795 201 aa10.83□□□□□ -0.68
PNKP-218ENST00000625299 HES5Q5TA89 166 aa10.83□□□□□ -0.68
PNKP-218ENST00000625299 LIPKQ5VXJ0 399 aa10.83□□□□□ -0.68
PNKP-218ENST00000625299 PLET1Q6UQ28 207 aa10.83□□□□□ -0.68
PNKP-218ENST00000625299 SSX9Q7RTT3 188 aa10.83□□□□□ -0.68
PNKP-218ENST00000625299 C8orf59Q8N0T1 100 aaPredicted RBP10.83□□□□□ -0.68
PNKP-218ENST00000625299 OR4S2Q8NH73 311 aa10.83□□□□□ -0.68
PNKP-218ENST00000625299 C2CD4CQ8TF44 421 aa10.83□□□□□ -0.68
PNKP-218ENST00000625299 TCTEX1D2Q8WW35 142 aa10.83□□□□□ -0.68
PNKP-218ENST00000625299 GALNT14Q96FL9 552 aa10.83□□□□□ -0.68
PNKP-218ENST00000625299 CXorf58Q96LI9 332 aa10.83□□□□□ -0.68
PNKP-218ENST00000625299 MAP6D1Q9H9H5 199 aa10.83□□□□□ -0.68
PNKP-218ENST00000625299 IGLV11-55A0A075B6I3 123 aa10.82□□□□□ -0.68
PNKP-218ENST00000625299 IGKV1D-8A0A087WSZ0 117 aa10.82□□□□□ -0.68
PNKP-218ENST00000625299 TSPAN4O14817 238 aa10.82□□□□□ -0.68
PNKP-218ENST00000625299 XRCC3O43542 346 aa10.82□□□□□ -0.68
PNKP-218ENST00000625299 GNAO1P09471 354 aa10.82□□□□□ -0.68
PNKP-218ENST00000625299 MAS1LP35410 378 aa10.82□□□□□ -0.68
PNKP-218ENST00000625299 ELLP55199 621 aaPredicted RBP10.82□□□□□ -0.68
PNKP-218ENST00000625299 LAMTOR1Q6IAA8 161 aa10.82□□□□□ -0.68
PNKP-218ENST00000625299 APRG1Q8IVJ8 170 aa10.82□□□□□ -0.68
PNKP-218ENST00000625299 TMEM167AQ8TBQ9 72 aa10.82□□□□□ -0.68
PNKP-218ENST00000625299 CD300LFQ8TDQ1 290 aa10.82□□□□□ -0.68
PNKP-218ENST00000625299 UFD1Q92890 307 aa10.82□□□□□ -0.68
PNKP-218ENST00000625299 RARRES2Q99969 163 aa10.82□□□□□ -0.68
PNKP-218ENST00000625299 SPATA2Q9UM82 520 aa10.82□□□□□ -0.68
PNKP-218ENST00000625299 RBMX2Q9Y388 322 aaKnown RBP10.82□□□□□ -0.68
PNKP-218ENST00000625299 PKHD1P08F94 4074 aa10.81□□□□□ -0.68
PNKP-218ENST00000625299 OR4C46A6NHA9 309 aa10.81□□□□□ -0.68
PNKP-218ENST00000625299 NFYAP23511 347 aaPredicted RBP10.81□□□□□ -0.68
PNKP-218ENST00000625299 GADD45AP24522 165 aa10.81□□□□□ -0.68
PNKP-218ENST00000625299 RPS25P62851 125 aaKnown RBP10.81□□□□□ -0.68
PNKP-218ENST00000625299 RPL8P62917 257 aaKnown RBP10.81□□□□□ -0.68
PNKP-218ENST00000625299 SPHARQ15513 63 aa10.81□□□□□ -0.68
PNKP-218ENST00000625299 ZNF124Q15973 351 aa10.81□□□□□ -0.68
PNKP-218ENST00000625299 PUSL1Q8N0Z8 303 aaKnown RBP10.81□□□□□ -0.68
PNKP-218ENST00000625299 OR10R2Q8NGX6 335 aa10.81□□□□□ -0.68
PNKP-218ENST00000625299 ZNF502Q8TBZ5 544 aa10.81□□□□□ -0.68
PNKP-218ENST00000625299 TMEM190Q8WZ59 177 aa10.81□□□□□ -0.68
PNKP-218ENST00000625299 C6orf62Q9GZU0 229 aaPredicted RBP10.81□□□□□ -0.68
PNKP-218ENST00000625299 PLCXD1Q9NUJ7 323 aa10.81□□□□□ -0.68
PNKP-218ENST00000625299 RAB22AQ9UL26 194 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms