RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 CD300LBA8K4G0 201 aa6.68□□□□□ -1.34
VPS11-209ENST00000622309 CLDN1O95832 211 aa6.68□□□□□ -1.34
VPS11-209ENST00000622309 ADH4P08319 380 aa6.68□□□□□ -1.34
VPS11-209ENST00000622309 HIST1H1EP10412 219 aaKnown RBP6.68□□□□□ -1.34
VPS11-209ENST00000622309 CRYBB3P26998 211 aa6.68□□□□□ -1.34
VPS11-209ENST00000622309 ZNF121P58317 390 aaPredicted RBP6.68□□□□□ -1.34
VPS11-209ENST00000622309 RPL32P62910 135 aaKnown RBP6.68□□□□□ -1.34
VPS11-209ENST00000622309 MEF2CQ06413 473 aaPredicted RBP6.68□□□□□ -1.34
VPS11-209ENST00000622309 YAF2Q8IY57 180 aa6.68□□□□□ -1.34
VPS11-209ENST00000622309 NT5CQ8TCD5 201 aa6.68□□□□□ -1.34
VPS11-209ENST00000622309 LHFPL6Q9Y693 200 aa6.68□□□□□ -1.34
VPS11-209ENST00000622309 PSMB11A5LHX3 300 aa6.68□□□□□ -1.34
VPS11-209ENST00000622309 CEACAM4O75871 244 aa6.68□□□□□ -1.34
VPS11-209ENST00000622309 SLC35E2P0CK97 266 aa6.68□□□□□ -1.34
VPS11-209ENST00000622309 GPR12P47775 334 aa6.68□□□□□ -1.34
VPS11-209ENST00000622309 OR1D4P47884 311 aa6.68□□□□□ -1.34
VPS11-209ENST00000622309 TCF15Q12870 199 aa6.68□□□□□ -1.34
VPS11-209ENST00000622309 RNASEKQ6P5S7 137 aaKnown RBP6.68□□□□□ -1.34
VPS11-209ENST00000622309 FA2HQ7L5A8 372 aa6.68□□□□□ -1.34
VPS11-209ENST00000622309 Q96M66 194 aa6.68□□□□□ -1.34
VPS11-209ENST00000622309 ARHGAP21Q5T5U3 1957 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 A0A0G2JLM5 398 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 H3BRM9 83 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 ISLRO14498 428 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 ANGPTL7O43827 346 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 HLA-DQA1P01909 254 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 APCSP02743 223 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 MGST1P10620 155 aaKnown RBP6.67□□□□□ -1.34
VPS11-209ENST00000622309 SLC35B1P78383 322 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 DPTQ07507 201 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 RUNX3Q13761 415 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 TNXAQ16473 311 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 SIGLEC15Q6ZMC9 328 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 BPIFA4PQ86YQ2 179 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 GAPTQ8N292 157 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 OR1F12Q8NHA8 337 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 OR2T6Q8NHC8 308 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 VSTM2AQ8TAG5 236 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 CT55Q8WUE5 264 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 VSTM2LQ96N03 204 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 DGAT2Q96PD7 388 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 TAAR6Q96RI8 345 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 LINC00470Q9BZP3 86 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 H3BML4 177 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 F2RL2O00254 374 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 PGCP20142 388 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 ZXDAP98168 799 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 TMEM97Q5BJF2 176 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 PARM1Q6UWI2 310 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 ZNF562Q6V9R5 426 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 PRSS41Q7RTY9 318 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 TMEM251Q8N6I4 163 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 OR5D13Q8NGL4 314 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 TMEM191AQ9H0A3 160 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 CLCF1Q9UBD9 225 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 PCNX3Q9H6A9 2034 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 ZNF318Q5VUA4 2279 aa6.67□□□□□ -1.34
VPS11-209ENST00000622309 BMPR1BO00238 502 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 PRKNO60260 465 aaPredicted RBP6.66□□□□□ -1.34
VPS11-209ENST00000622309 AREGP15514 252 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 PEBP1P30086 187 aaKnown RBP6.66□□□□□ -1.34
VPS11-209ENST00000622309 DRD3P35462 400 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 OR1D5P58170 312 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 MZT1Q08AG7 82 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 TMEM136Q6ZRR5 245 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 ASCL5Q7RTU5 278 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 SLC7A10Q9NS82 523 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 PLEK2Q9NYT0 353 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 C2orf16Q68DN1 1984 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 PIGBOS1A0A0B4J2F0 54 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 hCG_38984A0A1B0GV85 526 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 ANKRD30BLA7E2S9 258 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 GP1BBP13224 206 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 IZUMO4Q1ZYL8 232 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 BAHD1Q8TBE0 780 aaPredicted RBP6.66□□□□□ -1.34
VPS11-209ENST00000622309 RERGQ96A58 199 aaPredicted RBP6.66□□□□□ -1.34
VPS11-209ENST00000622309 JMJD8Q96S16 334 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 STARD5Q9NSY2 213 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 SHANK1Q9Y566 2161 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 TRBV20OR9-2A0A075B6H5 130 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 OR11H12B2RN74 326 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 DXOO77932 396 aaKnown RBP6.66□□□□□ -1.34
VPS11-209ENST00000622309 HLA-DRB1P01911 266 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 AMY1AP04745 511 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 SMIM10L1P0DMW3 83 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 FABP2P12104 132 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 CST6Q15828 149 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 FAM69BQ5VUD6 431 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 ZNF818PQ6ZRF7 136 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 SPATA12Q7Z6I5 190 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 OR11H1Q8NG94 326 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 OR11H2Q8NH07 326 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 LSM10Q969L4 123 aaKnown RBP6.66□□□□□ -1.34
VPS11-209ENST00000622309 RAB37Q96AX2 223 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 SMIM10Q96HG1 83 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 ZNF442Q9H7R0 627 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 GP6Q9HCN6 339 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 PNRC2Q9NPJ4 139 aaKnown RBP6.66□□□□□ -1.34
VPS11-209ENST00000622309 IL36GQ9NZH8 169 aa6.66□□□□□ -1.34
VPS11-209ENST00000622309 CACNG5Q9UF02 275 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 220.8 ms