RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 PFN1P07737 140 aaKnown RBP5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 HNF1AP20823 631 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 UCNP55089 124 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 TNFRSF9Q07011 255 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 CD69Q07108 199 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 HERPUD1Q15011 391 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 MYO7BQ6PIF6 2116 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 FAM214BQ7L5A3 538 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 FGFRL1Q8N441 504 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 SGMS2Q8NHU3 365 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 C11orf1Q9H5F2 150 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 TMEM140Q9NV12 185 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 TNRC6AQ8NDV7 1962 aaKnown RBP5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 GTF3C1Q12789 2109 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 BOD1L1Q8NFC6 3051 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 SH2D1BO14796 132 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 LYZL6O75951 148 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 CRYAAP02489 173 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 WDR73Q6P4I2 378 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 C9orf106Q8NAJ2 232 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 C1QTNF5Q9BXJ0 243 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 TUBG2Q9NRH3 451 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 ZNF586Q9NXT0 402 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 MTCH1Q9NZJ7 389 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 CLN8Q9UBY8 286 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 GOLT1BQ9Y3E0 138 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 MPC1Q9Y5U8 109 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 TLN1Q9Y490 2541 aaKnown RBP5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 GNG10P50151 68 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 EDDM3BP56851 147 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 ERVK-16P61578 105 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 RELQ04864 619 aaPredicted RBP5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 SIGLECL1Q8N7X8 197 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 UHRF2Q96PU4 802 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 F2RL2O00254 374 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 CRISP2P16562 243 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 CA6P23280 308 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 G6PCP35575 357 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 RAB31Q13636 194 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 ZNF726P1Q15940 193 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 MYPOPQ86VE0 399 aaPredicted RBP5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 RPP25LQ8N5L8 163 aaKnown RBP5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 PLPPR1Q8TBJ4 325 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 GALMQ96C23 342 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 TMEM68Q96MH6 324 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 OR2D2Q9H210 308 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 ENY2Q9NPA8 101 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 KCNIP2Q9NS61 270 aa5.87□□□□□ -1.47
SRGAP3-213ENST00000618999 PRRG2O14669 202 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 NDUFB4O95168 129 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 OR4A8P0C604 315 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 OR3A1P47881 315 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 ARL16Q0P5N6 197 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 ZNF324BQ6AW86 544 aaPredicted RBP5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 VWA1Q6PCB0 445 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 GFRALQ6UXV0 394 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 Q8IYB0 196 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 OR10G8Q8NGN5 311 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 C16orf92Q96LL3 132 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 PAM16Q9Y3D7 125 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 PCNX1Q96RV3 2341 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 IGHV3-64DA0A0J9YX35 117 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 J3QT63 122 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 FOXF2Q12947 444 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 KRTCAP3Q53RY4 240 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 SPINK9Q5DT21 86 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 ACTL10Q5JWF8 245 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 Q6ZRM9 215 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 LRP11Q86VZ4 500 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 GBGT1Q8N5D6 347 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 TXN2Q99757 166 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 HIPK2Q9H2X6 1198 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 TMEM160Q9NX00 188 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 CLCF1Q9UBD9 225 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 PROCRQ9UNN8 238 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 IGKV1-6A0A0C4DH72 117 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 C1QTNF9BB2RNN3 333 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 NGFP01138 241 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 C1QTNF9P0C862 333 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 IL3RAP26951 378 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 GABRA2P47869 451 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 KRTDAPP60985 99 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 PAFAH1B2P68402 229 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 SPATA46Q5T0L3 261 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 CPEB3Q8NE35 698 aaKnown RBP5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 OR4A16Q8NH70 328 aa5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 FAM103A1Q9BTL3 118 aaKnown RBP5.86□□□□□ -1.47
SRGAP3-213ENST00000618999 ZGRF1Q86YA3 2104 aa5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 FCN1O00602 326 aa5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 SS18L1O75177 396 aaPredicted RBP5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 AMY1AP04745 511 aa5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 COA6Q5JTJ3 125 aaKnown RBP5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 PRAMEF5Q5TYX0 476 aa5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 PRAMEF6Q5VXH4 476 aa5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 DRAM1Q8N682 238 aa5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 OR5AU1Q8NGC0 362 aa5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 COL6A6A6NMZ7 2263 aa5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 TMEM30CPA0ZSE6 113 aa5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 HPRT1P00492 218 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms