RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 RPL30P62888 115 aaKnown RBP1.11□□□□□ -2.23
TARDBP-220ENST00000618606 EDDM3AQ14507 147 aa1.11□□□□□ -2.23
TARDBP-220ENST00000618606 CDK10Q15131 360 aa1.11□□□□□ -2.23
TARDBP-220ENST00000618606 TMED2Q15363 201 aa1.11□□□□□ -2.23
TARDBP-220ENST00000618606 SPA17Q15506 151 aa1.11□□□□□ -2.23
TARDBP-220ENST00000618606 GLT6D1Q7Z4J2 308 aa1.11□□□□□ -2.23
TARDBP-220ENST00000618606 ANKRD29Q8N6D5 301 aa1.11□□□□□ -2.23
TARDBP-220ENST00000618606 ZNF283Q8N7M2 679 aa1.11□□□□□ -2.23
TARDBP-220ENST00000618606 ZNF676Q8N7Q3 588 aa1.11□□□□□ -2.23
TARDBP-220ENST00000618606 OR10X1Q8NGY0 326 aa1.11□□□□□ -2.23
TARDBP-220ENST00000618606 OR4X1Q8NH49 305 aa1.11□□□□□ -2.23
TARDBP-220ENST00000618606 FGF13Q92913 245 aa1.11□□□□□ -2.23
TARDBP-220ENST00000618606 CAPZA3Q96KX2 299 aa1.11□□□□□ -2.23
TARDBP-220ENST00000618606 CEP19Q96LK0 163 aa1.11□□□□□ -2.23
TARDBP-220ENST00000618606 OR52E6Q96RD3 313 aa1.11□□□□□ -2.23
TARDBP-220ENST00000618606 KLF6Q99612 283 aaPredicted RBP1.11□□□□□ -2.23
TARDBP-220ENST00000618606 C9orf16Q9BUW7 83 aa1.11□□□□□ -2.23
TARDBP-220ENST00000618606 HIGD2AQ9BW72 106 aa1.11□□□□□ -2.23
TARDBP-220ENST00000618606 FAM96AQ9H5X1 160 aa1.11□□□□□ -2.23
TARDBP-220ENST00000618606 UQCC1Q9NVA1 299 aa1.11□□□□□ -2.23
TARDBP-220ENST00000618606 PAQR5Q9NXK6 330 aaPredicted RBP1.11□□□□□ -2.23
TARDBP-220ENST00000618606 TAAR3PQ9P1P4 343 aa1.11□□□□□ -2.23
TARDBP-220ENST00000618606 MCTS1Q9ULC4 181 aaKnown RBP1.11□□□□□ -2.23
TARDBP-220ENST00000618606 ARL2BPQ9Y2Y0 163 aa1.11□□□□□ -2.23
TARDBP-220ENST00000618606 MMACHCQ9Y4U1 282 aa1.11□□□□□ -2.23
TARDBP-220ENST00000618606 PCF11O94913 1555 aaKnown RBP1.11□□□□□ -2.23
TARDBP-220ENST00000618606 MYO16Q9Y6X6 1858 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 DCCP43146 1447 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 SPATA31E1Q6ZUB1 1445 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 TRBV20OR9-2A0A075B6H5 130 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 IGLV10-54A0A075B6I4 117 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 IGHV3-15A0A0B4J1V0 119 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 IGKV1D-43A0A0B4J1Z2 117 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 TRAV26-2A0A0B4J265 109 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 PQLC2LA1A4F0 135 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 SDHAF1A6NFY7 115 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 TMEM238C9JI98 176 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 CDS2O95674 445 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 IGLV6-57P01721 117 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 SERPINA7P05543 415 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 CTSGP08311 255 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 CST2P09228 141 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 TFPTP0C1Z6 253 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 GZMBP10144 247 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 CPMP14384 443 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 KCNE1P15382 129 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 COL8A2P25067 703 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 CCR2P41597 374 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 SERPINB9P50453 376 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 RAB13P51153 203 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 TAS2R30P59541 319 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 ARF6P62330 175 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 FKBP1AP62942 108 aaKnown RBP1.1□□□□□ -2.23
TARDBP-220ENST00000618606 AKIRIN2Q53H80 203 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 TMEM97Q5BJF2 176 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 C20orf196Q8IYI0 205 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 KRT222Q8N1A0 295 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 OR8B12Q8NGG6 310 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 OR13C8Q8NGS7 320 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 PHB2Q99623 299 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 PKMYT1Q99640 499 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 TMEM147Q9BVK8 224 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 AICDAQ9GZX7 198 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 C11orf68Q9H3H3 251 aaKnown RBP1.1□□□□□ -2.23
TARDBP-220ENST00000618606 DOK5Q9P104 306 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 TP73-AS1Q9UF72 201 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 AK3Q9UIJ7 227 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 ZNF391Q9UJN7 358 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 KLK5Q9Y337 293 aaPredicted RBP1.1□□□□□ -2.23
TARDBP-220ENST00000618606 RBM7Q9Y580 266 aaKnown RBP1.1□□□□□ -2.23
TARDBP-220ENST00000618606 HECW1Q76N89 1606 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 CHD5Q8TDI0 1954 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 SHROOM3Q8TF72 1996 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 ZBED9Q6R2W3 1325 aa1.1□□□□□ -2.23
TARDBP-220ENST00000618606 NAV1Q8NEY1 1877 aa1.09□□□□□ -2.23
TARDBP-220ENST00000618606 IGKV2-24A0A0C4DH68 120 aa1.09□□□□□ -2.23
TARDBP-220ENST00000618606 A0A0J9YX75 114 aa1.09□□□□□ -2.23
TARDBP-220ENST00000618606 A0A1B0GV50 99 aa1.09□□□□□ -2.23
TARDBP-220ENST00000618606 A0A1W2PQD3 144 aa1.09□□□□□ -2.23
TARDBP-220ENST00000618606 C11orf86A6NJI1 115 aa1.09□□□□□ -2.23
TARDBP-220ENST00000618606 FAM159BA6NKW6 160 aa1.09□□□□□ -2.23
TARDBP-220ENST00000618606 TXNDC9O14530 226 aa1.09□□□□□ -2.23
TARDBP-220ENST00000618606 SULT1B1O43704 296 aa1.09□□□□□ -2.23
TARDBP-220ENST00000618606 PDE6DO43924 150 aa1.09□□□□□ -2.23
TARDBP-220ENST00000618606 NOS1APO75052 506 aaPredicted RBP1.09□□□□□ -2.23
TARDBP-220ENST00000618606 NDUFB2O95178 105 aa1.09□□□□□ -2.23
TARDBP-220ENST00000618606 P0C880 135 aa1.09□□□□□ -2.23
TARDBP-220ENST00000618606 ZNF705DP0CH99 300 aaPredicted RBP1.09□□□□□ -2.23
TARDBP-220ENST00000618606 DEFA4P12838 97 aa1.09□□□□□ -2.23
TARDBP-220ENST00000618606 CCL5P13501 91 aa1.09□□□□□ -2.23
TARDBP-220ENST00000618606 S100A7P31151 101 aa1.09□□□□□ -2.23
TARDBP-220ENST00000618606 RPL27AP46776 148 aaKnown RBP1.09□□□□□ -2.23
TARDBP-220ENST00000618606 CSN1S1P47710 185 aa1.09□□□□□ -2.23
TARDBP-220ENST00000618606 XCL1P47992 114 aa1.09□□□□□ -2.23
TARDBP-220ENST00000618606 RBM11P57052 281 aaKnown RBP1.09□□□□□ -2.23
TARDBP-220ENST00000618606 VBP1P61758 197 aa1.09□□□□□ -2.23
TARDBP-220ENST00000618606 GNA12Q03113 381 aa1.09□□□□□ -2.23
TARDBP-220ENST00000618606 GRK1Q15835 563 aa1.09□□□□□ -2.23
TARDBP-220ENST00000618606 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.09□□□□□ -2.23
TARDBP-220ENST00000618606 TMEM42Q69YG0 159 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms