RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 HRASP01112 189 aa12.37□□□□□ -0.43
BRCA1-228ENST00000618469 GNRHRP30968 328 aa12.37□□□□□ -0.43
BRCA1-228ENST00000618469 PUSL1Q8N0Z8 303 aaKnown RBP12.37□□□□□ -0.43
BRCA1-228ENST00000618469 TMEM167AQ8TBQ9 72 aa12.37□□□□□ -0.43
BRCA1-228ENST00000618469 OR2A7Q96R45 310 aa12.37□□□□□ -0.43
BRCA1-228ENST00000618469 MIXL1Q9H2W2 232 aa12.37□□□□□ -0.43
BRCA1-228ENST00000618469 TNCP24821 2201 aa12.36□□□□□ -0.43
BRCA1-228ENST00000618469 IGHV4OR15-8A0A075B7B6 117 aa12.36□□□□□ -0.43
BRCA1-228ENST00000618469 A0A087WW49 117 aa12.36□□□□□ -0.43
BRCA1-228ENST00000618469 H3BMQ9 156 aa12.36□□□□□ -0.43
BRCA1-228ENST00000618469 M0QYG6 137 aa12.36□□□□□ -0.43
BRCA1-228ENST00000618469 KRTAP10-11P60412 298 aa12.36□□□□□ -0.43
BRCA1-228ENST00000618469 OR52I2Q8NH67 350 aa12.36□□□□□ -0.43
BRCA1-228ENST00000618469 DYNC2LI1Q8TCX1 351 aa12.36□□□□□ -0.43
BRCA1-228ENST00000618469 ISOC1Q96CN7 298 aa12.36□□□□□ -0.43
BRCA1-228ENST00000618469 SPIN2AQ99865 258 aa12.36□□□□□ -0.43
BRCA1-228ENST00000618469 SPIN2BQ9BPZ2 258 aa12.36□□□□□ -0.43
BRCA1-228ENST00000618469 SCOCQ9UIL1 159 aa12.36□□□□□ -0.43
BRCA1-228ENST00000618469 TENM3Q9P273 2699 aa12.35□□□□□ -0.43
BRCA1-228ENST00000618469 C13orf42A0A1B0GVH6 325 aa12.35□□□□□ -0.43
BRCA1-228ENST00000618469 WI2-2373I1.2A0A1W2PRP0 233 aa12.35□□□□□ -0.43
BRCA1-228ENST00000618469 SEC14L6B5MCN3 397 aa12.35□□□□□ -0.43
BRCA1-228ENST00000618469 LINC01619G3V211 115 aa12.35□□□□□ -0.43
BRCA1-228ENST00000618469 GPR31O00270 319 aa12.35□□□□□ -0.43
BRCA1-228ENST00000618469 CTDSP2O14595 271 aa12.35□□□□□ -0.43
BRCA1-228ENST00000618469 S1PR2O95136 353 aa12.35□□□□□ -0.43
BRCA1-228ENST00000618469 OR9G9P0C7N8 305 aa12.35□□□□□ -0.43
BRCA1-228ENST00000618469 SLURP1P55000 103 aa12.35□□□□□ -0.43
BRCA1-228ENST00000618469 TAS2R31P59538 309 aa12.35□□□□□ -0.43
BRCA1-228ENST00000618469 EGFEM1PQ0D2K5 195 aa12.35□□□□□ -0.43
BRCA1-228ENST00000618469 OR4A47Q6IF82 309 aa12.35□□□□□ -0.43
BRCA1-228ENST00000618469 CMTM1Q8IZ96 169 aa12.35□□□□□ -0.43
BRCA1-228ENST00000618469 ADAD2Q8NCV1 583 aaKnown RBP12.35□□□□□ -0.43
BRCA1-228ENST00000618469 ABHD1Q96SE0 405 aa12.35□□□□□ -0.43
BRCA1-228ENST00000618469 TINAGL1Q9GZM7 467 aaPredicted RBP12.35□□□□□ -0.43
BRCA1-228ENST00000618469 HRASLSQ9HDD0 168 aa12.35□□□□□ -0.43
BRCA1-228ENST00000618469 KLK11Q9UBX7 282 aa12.35□□□□□ -0.43
BRCA1-228ENST00000618469 PGLYRP1O75594 196 aaPredicted RBP12.34□□□□□ -0.43
BRCA1-228ENST00000618469 HPRT1P00492 218 aa12.34□□□□□ -0.43
BRCA1-228ENST00000618469 RPL27AP46776 148 aaKnown RBP12.34□□□□□ -0.43
BRCA1-228ENST00000618469 RPL8P62917 257 aaKnown RBP12.34□□□□□ -0.43
BRCA1-228ENST00000618469 DGCR2P98153 550 aa12.34□□□□□ -0.43
BRCA1-228ENST00000618469 PHLDA2Q53GA4 152 aa12.34□□□□□ -0.43
BRCA1-228ENST00000618469 RNASE10Q5GAN6 216 aaKnown RBP12.34□□□□□ -0.43
BRCA1-228ENST00000618469 C9orf66Q5T8R8 295 aa12.34□□□□□ -0.43
BRCA1-228ENST00000618469 DMBX1Q8NFW5 382 aa12.34□□□□□ -0.43
BRCA1-228ENST00000618469 CD300LFQ8TDQ1 290 aa12.34□□□□□ -0.43
BRCA1-228ENST00000618469 C15orf40Q8WUR7 153 aa12.34□□□□□ -0.43
BRCA1-228ENST00000618469 WWC2-AS2Q96NR7 200 aa12.34□□□□□ -0.43
BRCA1-228ENST00000618469 FYTTD1Q96QD9 318 aaKnown RBP12.34□□□□□ -0.43
BRCA1-228ENST00000618469 C6orf62Q9GZU0 229 aaPredicted RBP12.34□□□□□ -0.43
BRCA1-228ENST00000618469 BET1LQ9NYM9 111 aa12.34□□□□□ -0.43
BRCA1-228ENST00000618469 COMMD9Q9P000 198 aa12.34□□□□□ -0.43
BRCA1-228ENST00000618469 DNAH9Q9NYC9 4486 aa12.34□□□□□ -0.43
BRCA1-228ENST00000618469 A0A0G2JLM5 398 aa12.33□□□□□ -0.44
BRCA1-228ENST00000618469 HMX3A6NHT5 357 aa12.33□□□□□ -0.44
BRCA1-228ENST00000618469 TPPPO94811 219 aa12.33□□□□□ -0.44
BRCA1-228ENST00000618469 PRH1P02810 166 aa12.33□□□□□ -0.44
BRCA1-228ENST00000618469 HSPB1P04792 205 aaKnown RBP12.33□□□□□ -0.44
BRCA1-228ENST00000618469 IFNA6P05013 189 aa12.33□□□□□ -0.44
BRCA1-228ENST00000618469 RPA2P15927 270 aa12.33□□□□□ -0.44
BRCA1-228ENST00000618469 NQO2P16083 231 aa12.33□□□□□ -0.44
BRCA1-228ENST00000618469 MAS1LP35410 378 aa12.33□□□□□ -0.44
BRCA1-228ENST00000618469 OR4A5Q8NH83 315 aa12.33□□□□□ -0.44
BRCA1-228ENST00000618469 DCUN1D4Q92564 292 aa12.33□□□□□ -0.44
BRCA1-228ENST00000618469 AIFM2Q9BRQ8 373 aa12.33□□□□□ -0.44
BRCA1-228ENST00000618469 PLEKHA2Q9HB19 425 aa12.33□□□□□ -0.44
BRCA1-228ENST00000618469 TMEM140Q9NV12 185 aa12.33□□□□□ -0.44
BRCA1-228ENST00000618469 MTFP1Q9UDX5 166 aa12.33□□□□□ -0.44
BRCA1-228ENST00000618469 DPPA5A6NC42 116 aa12.32□□□□□ -0.44
BRCA1-228ENST00000618469 CCDC160A6NGH7 325 aa12.32□□□□□ -0.44
BRCA1-228ENST00000618469 TEX22C9J3V5 150 aa12.32□□□□□ -0.44
BRCA1-228ENST00000618469 OVOL1O14753 267 aa12.32□□□□□ -0.44
BRCA1-228ENST00000618469 BRI3O95415 125 aa12.32□□□□□ -0.44
BRCA1-228ENST00000618469 CD3DP04234 171 aa12.32□□□□□ -0.44
BRCA1-228ENST00000618469 MYOD1P15172 320 aa12.32□□□□□ -0.44
BRCA1-228ENST00000618469 HLA-GP17693 338 aa12.32□□□□□ -0.44
BRCA1-228ENST00000618469 F2RP25116 425 aa12.32□□□□□ -0.44
BRCA1-228ENST00000618469 S100GP29377 79 aa12.32□□□□□ -0.44
BRCA1-228ENST00000618469 ERVK-16P61578 105 aa12.32□□□□□ -0.44
BRCA1-228ENST00000618469 CD69Q07108 199 aa12.32□□□□□ -0.44
BRCA1-228ENST00000618469 POU2AF1Q16633 256 aa12.32□□□□□ -0.44
BRCA1-228ENST00000618469 LPCAT3Q6P1A2 487 aa12.32□□□□□ -0.44
BRCA1-228ENST00000618469 SLC38A6Q8IZM9 456 aa12.32□□□□□ -0.44
BRCA1-228ENST00000618469 FCAMRQ8WWV6 532 aa12.32□□□□□ -0.44
BRCA1-228ENST00000618469 DLX4Q92988 240 aaPredicted RBP12.32□□□□□ -0.44
BRCA1-228ENST00000618469 DIRAS2Q96HU8 199 aa12.32□□□□□ -0.44
BRCA1-228ENST00000618469 A0A1B0GW64 132 aa12.31□□□□□ -0.44
BRCA1-228ENST00000618469 ANKRD34BA5PLL1 514 aa12.31□□□□□ -0.44
BRCA1-228ENST00000618469 MARCH11A6NNE9 402 aa12.31□□□□□ -0.44
BRCA1-228ENST00000618469 E7EUB6 86 aa12.31□□□□□ -0.44
BRCA1-228ENST00000618469 GABARAPH6UMI1 98 aa12.31□□□□□ -0.44
BRCA1-228ENST00000618469 RBMXL2O75526 392 aaKnown RBP12.31□□□□□ -0.44
BRCA1-228ENST00000618469 IL6RP08887 468 aaPredicted RBP12.31□□□□□ -0.44
BRCA1-228ENST00000618469 ZNF735P0CB33 412 aa12.31□□□□□ -0.44
BRCA1-228ENST00000618469 TBPP20226 339 aa12.31□□□□□ -0.44
BRCA1-228ENST00000618469 PPP5CP53041 499 aa12.31□□□□□ -0.44
BRCA1-228ENST00000618469 TAS2R19P59542 299 aa12.31□□□□□ -0.44
BRCA1-228ENST00000618469 MRPS10P82664 201 aaKnown RBP12.31□□□□□ -0.44
BRCA1-228ENST00000618469 RHOGP84095 191 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms