RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 A0A0B4J293 547 aa11.7□□□□□ -0.54
CIITA-213ENST00000618327 MARCH11A6NNE9 402 aa11.7□□□□□ -0.54
CIITA-213ENST00000618327 DCTN5Q9BTE1 182 aa11.7□□□□□ -0.54
CIITA-213ENST00000618327 TRAV24A0A0B4J272 114 aa11.7□□□□□ -0.54
CIITA-213ENST00000618327 LIPFP07098 398 aa11.7□□□□□ -0.54
CIITA-213ENST00000618327 GAMTQ14353 236 aa11.7□□□□□ -0.54
CIITA-213ENST00000618327 MBNL2Q5VZF2 373 aaKnown RBP11.7□□□□□ -0.54
CIITA-213ENST00000618327 TMEM42Q69YG0 159 aa11.7□□□□□ -0.54
CIITA-213ENST00000618327 H1FOOQ8IZA3 346 aaPredicted RBP11.7□□□□□ -0.54
CIITA-213ENST00000618327 RTBDNQ9BSG5 229 aaPredicted RBP11.7□□□□□ -0.54
CIITA-213ENST00000618327 FER1L5A0AVI2 2057 aa11.7□□□□□ -0.54
CIITA-213ENST00000618327 MUC22E2RYF6 1773 aaPredicted RBP11.7□□□□□ -0.54
CIITA-213ENST00000618327 S1PR2O95136 353 aa11.69□□□□□ -0.54
CIITA-213ENST00000618327 CD99P14209 185 aa11.69□□□□□ -0.54
CIITA-213ENST00000618327 HGFACQ04756 655 aa11.69□□□□□ -0.54
CIITA-213ENST00000618327 GUCA2BQ16661 112 aa11.69□□□□□ -0.54
CIITA-213ENST00000618327 COL5A1-AS1Q5SY13 56 aa11.69□□□□□ -0.54
CIITA-213ENST00000618327 ZNF474Q6S9Z5 364 aaPredicted RBP11.69□□□□□ -0.54
CIITA-213ENST00000618327 PUSL1Q8N0Z8 303 aaKnown RBP11.69□□□□□ -0.54
CIITA-213ENST00000618327 NEU4Q8WWR8 484 aaPredicted RBP11.69□□□□□ -0.54
CIITA-213ENST00000618327 GTF3AQ92664 365 aaKnown RBP11.69□□□□□ -0.54
CIITA-213ENST00000618327 LOC105371242A0A075B767 164 aa11.69□□□□□ -0.54
CIITA-213ENST00000618327 ZNF785A8K8V0 405 aa11.69□□□□□ -0.54
CIITA-213ENST00000618327 TCF21O43680 179 aa11.69□□□□□ -0.54
CIITA-213ENST00000618327 PITX3O75364 302 aa11.69□□□□□ -0.54
CIITA-213ENST00000618327 DKK1O94907 266 aa11.69□□□□□ -0.54
CIITA-213ENST00000618327 VN1R17PQ8TDU5 208 aa11.69□□□□□ -0.54
CIITA-213ENST00000618327 RNF138Q8WVD3 245 aa11.69□□□□□ -0.54
CIITA-213ENST00000618327 TMEM167BQ9NRX6 74 aa11.69□□□□□ -0.54
CIITA-213ENST00000618327 APELAP0DMC3 54 aa11.69□□□□□ -0.54
CIITA-213ENST00000618327 ATP6V0CP27449 155 aa11.69□□□□□ -0.54
CIITA-213ENST00000618327 SRP14P37108 136 aaKnown RBP11.69□□□□□ -0.54
CIITA-213ENST00000618327 UBE2L3P68036 154 aaKnown RBP11.69□□□□□ -0.54
CIITA-213ENST00000618327 FAM74A3Q4VXF1 159 aa11.69□□□□□ -0.54
CIITA-213ENST00000618327 GALNT14Q96FL9 552 aa11.69□□□□□ -0.54
CIITA-213ENST00000618327 DOK5Q9P104 306 aa11.69□□□□□ -0.54
CIITA-213ENST00000618327 TM4SF5O14894 197 aa11.69□□□□□ -0.54
CIITA-213ENST00000618327 SSMEM1Q8WWF3 244 aa11.69□□□□□ -0.54
CIITA-213ENST00000618327 WFIKKN1Q96NZ8 548 aa11.69□□□□□ -0.54
CIITA-213ENST00000618327 TBX15Q96SF7 602 aa11.69□□□□□ -0.54
CIITA-213ENST00000618327 ADAMTS9Q9P2N4 1935 aa11.69□□□□□ -0.54
CIITA-213ENST00000618327 LGALS7P47929 136 aa11.68□□□□□ -0.54
CIITA-213ENST00000618327 IZUMO4Q1ZYL8 232 aa11.68□□□□□ -0.54
CIITA-213ENST00000618327 SPNS3Q6ZMD2 512 aa11.68□□□□□ -0.54
CIITA-213ENST00000618327 RNF144BQ7Z419 303 aa11.68□□□□□ -0.54
CIITA-213ENST00000618327 SLC35E3Q7Z769 313 aa11.68□□□□□ -0.54
CIITA-213ENST00000618327 LSM10Q969L4 123 aaKnown RBP11.68□□□□□ -0.54
CIITA-213ENST00000618327 PIMREGQ9BSJ6 248 aa11.68□□□□□ -0.54
CIITA-213ENST00000618327 TMUB1Q9BVT8 246 aa11.68□□□□□ -0.54
CIITA-213ENST00000618327 TMEM140Q9NV12 185 aa11.68□□□□□ -0.54
CIITA-213ENST00000618327 PCDH15Q96QU1 1955 aa11.68□□□□□ -0.54
CIITA-213ENST00000618327 PROB1E7EW31 1015 aa11.68□□□□□ -0.54
CIITA-213ENST00000618327 WT1P19544 449 aaPredicted RBP11.68□□□□□ -0.54
CIITA-213ENST00000618327 TMEM186Q96B77 213 aa11.68□□□□□ -0.54
CIITA-213ENST00000618327 FAM90A26D6RGX4 464 aa11.68□□□□□ -0.54
CIITA-213ENST00000618327 RPL7P18124 248 aaKnown RBP11.68□□□□□ -0.54
CIITA-213ENST00000618327 MRPL54Q6P161 138 aaKnown RBP11.68□□□□□ -0.54
CIITA-213ENST00000618327 SMDT1Q9H4I9 107 aa11.68□□□□□ -0.54
CIITA-213ENST00000618327 COA4Q9NYJ1 87 aa11.68□□□□□ -0.54
CIITA-213ENST00000618327 KBTBD11-OT1A0A1B0GTJ5 212 aa11.68□□□□□ -0.54
CIITA-213ENST00000618327 A6NDN8 102 aa11.68□□□□□ -0.54
CIITA-213ENST00000618327 SNURFLB1AK76 121 aa11.68□□□□□ -0.54
CIITA-213ENST00000618327 ORM2P19652 201 aa11.68□□□□□ -0.54
CIITA-213ENST00000618327 PDLIM4P50479 330 aa11.68□□□□□ -0.54
CIITA-213ENST00000618327 RPL8P62917 257 aaKnown RBP11.68□□□□□ -0.54
CIITA-213ENST00000618327 CLEC7AQ9BXN2 247 aa11.68□□□□□ -0.54
CIITA-213ENST00000618327 RBKSQ9H477 322 aa11.68□□□□□ -0.54
CIITA-213ENST00000618327 A0A1W2PNU3 283 aaPredicted RBP11.67□□□□□ -0.54
CIITA-213ENST00000618327 IGHV1-46P01743 117 aa11.67□□□□□ -0.54
CIITA-213ENST00000618327 KHDC3LQ587J8 217 aa11.67□□□□□ -0.54
CIITA-213ENST00000618327 AQP10Q96PS8 301 aa11.67□□□□□ -0.54
CIITA-213ENST00000618327 CCL19Q99731 98 aa11.67□□□□□ -0.54
CIITA-213ENST00000618327 TRBV6-7A0A0A0MS04 114 aa11.67□□□□□ -0.54
CIITA-213ENST00000618327 CD8AP01732 235 aa11.67□□□□□ -0.54
CIITA-213ENST00000618327 HKR1P10072 659 aa11.67□□□□□ -0.54
CIITA-213ENST00000618327 RPL27AP46776 148 aaKnown RBP11.67□□□□□ -0.54
CIITA-213ENST00000618327 RND3P61587 244 aa11.67□□□□□ -0.54
CIITA-213ENST00000618327 WDR31Q8NA23 367 aa11.67□□□□□ -0.54
CIITA-213ENST00000618327 PAGE4O60829 102 aa11.67□□□□□ -0.54
CIITA-213ENST00000618327 STAG3L2P0CL84 134 aa11.67□□□□□ -0.54
CIITA-213ENST00000618327 RPL39P5Q59GN2 51 aa11.67□□□□□ -0.54
CIITA-213ENST00000618327 TEPPQ6URK8 271 aa11.67□□□□□ -0.54
CIITA-213ENST00000618327 ZNF497Q6ZNH5 498 aa11.67□□□□□ -0.54
CIITA-213ENST00000618327 MAP1LC3CQ9BXW4 147 aa11.67□□□□□ -0.54
CIITA-213ENST00000618327 CADP27708 2225 aa11.66□□□□□ -0.54
CIITA-213ENST00000618327 ZG16O60844 167 aa11.66□□□□□ -0.54
CIITA-213ENST00000618327 LILRA1O75019 489 aa11.66□□□□□ -0.54
CIITA-213ENST00000618327 IGKV3-15P01624 115 aa11.66□□□□□ -0.54
CIITA-213ENST00000618327 ZNF735P0CB33 412 aa11.66□□□□□ -0.54
CIITA-213ENST00000618327 SPRY4Q9C004 299 aa11.66□□□□□ -0.54
CIITA-213ENST00000618327 TECRQ9NZ01 308 aaKnown RBP11.66□□□□□ -0.54
CIITA-213ENST00000618327 IGKV1D-8A0A087WSZ0 117 aa11.66□□□□□ -0.54
CIITA-213ENST00000618327 NTF4P34130 210 aa11.66□□□□□ -0.54
CIITA-213ENST00000618327 IER3P46695 156 aa11.66□□□□□ -0.54
CIITA-213ENST00000618327 MEF2CQ06413 473 aaPredicted RBP11.66□□□□□ -0.54
CIITA-213ENST00000618327 TNFRSF9Q07011 255 aa11.66□□□□□ -0.54
CIITA-213ENST00000618327 PRR30Q53SZ7 412 aaPredicted RBP11.66□□□□□ -0.54
CIITA-213ENST00000618327 ST6GALNAC3Q8NDV1 305 aa11.66□□□□□ -0.54
CIITA-213ENST00000618327 TNFRSF19Q9NS68 423 aa11.66□□□□□ -0.54
CIITA-213ENST00000618327 TFF1P04155 84 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms