RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 RHOVQ96L33 236 aa19.3■□□□□ 0.68
PMS1-220ENST00000618056 CCDC32Q9BV29 185 aa19.3■□□□□ 0.68
PMS1-220ENST00000618056 MIXL1Q9H2W2 232 aa19.3■□□□□ 0.68
PMS1-220ENST00000618056 OR2A4O95047 310 aa19.29■□□□□ 0.68
PMS1-220ENST00000618056 VKORC1L1Q8N0U8 176 aa19.29■□□□□ 0.68
PMS1-220ENST00000618056 OR5T1Q8NG75 326 aa19.29■□□□□ 0.68
PMS1-220ENST00000618056 OR2A7Q96R45 310 aa19.29■□□□□ 0.68
PMS1-220ENST00000618056 MSGN1A6NI15 193 aa19.28■□□□□ 0.68
PMS1-220ENST00000618056 RAMP3O60896 148 aa19.28■□□□□ 0.68
PMS1-220ENST00000618056 ACTL6BO94805 426 aa19.28■□□□□ 0.68
PMS1-220ENST00000618056 KBTBD11O94819 623 aa19.28■□□□□ 0.68
PMS1-220ENST00000618056 LGALS1P09382 135 aaKnown RBP19.28■□□□□ 0.68
PMS1-220ENST00000618056 OR8U8P0C7N1 319 aa19.28■□□□□ 0.68
PMS1-220ENST00000618056 RAB25P57735 213 aa19.28■□□□□ 0.68
PMS1-220ENST00000618056 TPPP2P59282 170 aa19.28■□□□□ 0.68
PMS1-220ENST00000618056 ZNF616Q08AN1 781 aa19.28■□□□□ 0.68
PMS1-220ENST00000618056 OR1N2Q8NGR9 330 aa19.28■□□□□ 0.68
PMS1-220ENST00000618056 TMEM167AQ8TBQ9 72 aa19.28■□□□□ 0.68
PMS1-220ENST00000618056 CD300LFQ8TDQ1 290 aa19.28■□□□□ 0.68
PMS1-220ENST00000618056 MS4A10Q96PG2 267 aa19.28■□□□□ 0.68
PMS1-220ENST00000618056 OR5B12Q96R08 314 aa19.28■□□□□ 0.68
PMS1-220ENST00000618056 ABHD1Q96SE0 405 aa19.28■□□□□ 0.68
PMS1-220ENST00000618056 AIFM2Q9BRQ8 373 aa19.28■□□□□ 0.68
PMS1-220ENST00000618056 FXYD6Q9H0Q3 95 aa19.28■□□□□ 0.68
PMS1-220ENST00000618056 V9GYH0 126 aa19.28■□□□□ 0.68
PMS1-220ENST00000618056 TSPAN5P62079 268 aa19.28■□□□□ 0.68
PMS1-220ENST00000618056 EGFEM1PQ0D2K5 195 aa19.28■□□□□ 0.68
PMS1-220ENST00000618056 DIRAS2Q96HU8 199 aa19.28■□□□□ 0.68
PMS1-220ENST00000618056 KLK11Q9UBX7 282 aa19.28■□□□□ 0.68
PMS1-220ENST00000618056 HPRT1P00492 218 aa19.27■□□□□ 0.67
PMS1-220ENST00000618056 PRB2P02812 416 aaPredicted RBP19.27■□□□□ 0.67
PMS1-220ENST00000618056 TRGV3P03979 118 aa19.27■□□□□ 0.67
PMS1-220ENST00000618056 IFITM3Q01628 133 aa19.27■□□□□ 0.67
PMS1-220ENST00000618056 VAX1Q5SQQ9 334 aa19.27■□□□□ 0.67
PMS1-220ENST00000618056 AADACL3Q5VUY0 350 aa19.27■□□□□ 0.67
PMS1-220ENST00000618056 OR51H1Q8NH63 302 aa19.27■□□□□ 0.67
PMS1-220ENST00000618056 OR52I2Q8NH67 350 aa19.27■□□□□ 0.67
PMS1-220ENST00000618056 PHB2Q99623 299 aa19.27■□□□□ 0.67
PMS1-220ENST00000618056 SPIN2AQ99865 258 aa19.27■□□□□ 0.67
PMS1-220ENST00000618056 SPIN2BQ9BPZ2 258 aa19.27■□□□□ 0.67
PMS1-220ENST00000618056 MTFP1Q9UDX5 166 aa19.27■□□□□ 0.67
PMS1-220ENST00000618056 PGLYRP1O75594 196 aaPredicted RBP19.26■□□□□ 0.67
PMS1-220ENST00000618056 MAS1LP35410 378 aa19.26■□□□□ 0.67
PMS1-220ENST00000618056 TAS2R31P59538 309 aa19.26■□□□□ 0.67
PMS1-220ENST00000618056 POU2AF1Q16633 256 aa19.26■□□□□ 0.67
PMS1-220ENST00000618056 CMTM1Q8IZ96 169 aa19.26■□□□□ 0.67
PMS1-220ENST00000618056 CENPSQ8N2Z9 138 aa19.26■□□□□ 0.67
PMS1-220ENST00000618056 DPF1Q92782 380 aa19.26■□□□□ 0.67
PMS1-220ENST00000618056 ZNF355PQ9NSJ1 428 aa19.26■□□□□ 0.67
PMS1-220ENST00000618056 AURKAIP1Q9NWT8 199 aaPredicted RBP19.26■□□□□ 0.67
PMS1-220ENST00000618056 BET1LQ9NYM9 111 aa19.26■□□□□ 0.67
PMS1-220ENST00000618056 GPR31O00270 319 aa19.25■□□□□ 0.67
PMS1-220ENST00000618056 LPCAT3Q6P1A2 487 aa19.25■□□□□ 0.67
PMS1-220ENST00000618056 Q6ZNX1 250 aa19.25■□□□□ 0.67
PMS1-220ENST00000618056 ADAD2Q8NCV1 583 aaKnown RBP19.25■□□□□ 0.67
PMS1-220ENST00000618056 OR4A5Q8NH83 315 aa19.25■□□□□ 0.67
PMS1-220ENST00000618056 TINAGL1Q9GZM7 467 aaPredicted RBP19.25■□□□□ 0.67
PMS1-220ENST00000618056 ALX4Q9H161 411 aaPredicted RBP19.25■□□□□ 0.67
PMS1-220ENST00000618056 PLEKHA2Q9HB19 425 aa19.25■□□□□ 0.67
PMS1-220ENST00000618056 SORL1Q92673 2214 aa19.24■□□□□ 0.67
PMS1-220ENST00000618056 A0A0G2JLM5 398 aa19.24■□□□□ 0.67
PMS1-220ENST00000618056 OR9G9P0C7N8 305 aa19.24■□□□□ 0.67
PMS1-220ENST00000618056 NQO2P16083 231 aa19.24■□□□□ 0.67
PMS1-220ENST00000618056 TBPP20226 339 aa19.24■□□□□ 0.67
PMS1-220ENST00000618056 TRIM16LQ309B1 348 aa19.24■□□□□ 0.67
PMS1-220ENST00000618056 FCAMRQ8WWV6 532 aa19.24■□□□□ 0.67
PMS1-220ENST00000618056 FABP12A6NFH5 140 aa19.23■□□□□ 0.67
PMS1-220ENST00000618056 GABARAPH6UMI1 98 aa19.23■□□□□ 0.67
PMS1-220ENST00000618056 IGHV3-11P01762 117 aa19.23■□□□□ 0.67
PMS1-220ENST00000618056 RLN1P04808 185 aa19.23■□□□□ 0.67
PMS1-220ENST00000618056 APELAP0DMC3 54 aa19.23■□□□□ 0.67
PMS1-220ENST00000618056 UCP3P55916 312 aa19.23■□□□□ 0.67
PMS1-220ENST00000618056 MRPS10P82664 201 aaKnown RBP19.23■□□□□ 0.67
PMS1-220ENST00000618056 RNASE12Q5GAN4 147 aaKnown RBP19.23■□□□□ 0.67
PMS1-220ENST00000618056 C10orf55Q5SWW7 151 aa19.23■□□□□ 0.67
PMS1-220ENST00000618056 OR4A47Q6IF82 309 aa19.23■□□□□ 0.67
PMS1-220ENST00000618056 SSX9Q7RTT3 188 aa19.23■□□□□ 0.67
PMS1-220ENST00000618056 SRRQ9GZT4 340 aa19.23■□□□□ 0.67
PMS1-220ENST00000618056 COA4Q9NYJ1 87 aa19.23■□□□□ 0.67
PMS1-220ENST00000618056 COMMD9Q9P000 198 aa19.23■□□□□ 0.67
PMS1-220ENST00000618056 RABL2AQ9UBK7 228 aaPredicted RBP19.23■□□□□ 0.67
PMS1-220ENST00000618056 RABL2BQ9UNT1 228 aa19.23■□□□□ 0.67
PMS1-220ENST00000618056 LINC01619G3V211 115 aa19.22■□□□□ 0.67
PMS1-220ENST00000618056 MPPED1O15442 326 aa19.22■□□□□ 0.67
PMS1-220ENST00000618056 F2RP25116 425 aa19.22■□□□□ 0.67
PMS1-220ENST00000618056 PTBP1P26599 531 aaKnown RBP eCLIP19.22■□□□□ 0.674e-17■■■■■ 65.4
PMS1-220ENST00000618056 RPL8P62917 257 aaKnown RBP19.22■□□□□ 0.67
PMS1-220ENST00000618056 SSBP1Q04837 148 aaKnown RBP19.22■□□□□ 0.67
PMS1-220ENST00000618056 ZNF79Q15937 498 aa19.22■□□□□ 0.67
PMS1-220ENST00000618056 SDHCQ99643 169 aaPredicted RBP19.22■□□□□ 0.67
PMS1-220ENST00000618056 RSRP1Q9BUV0 290 aa19.22■□□□□ 0.67
PMS1-220ENST00000618056 hCG_2014768A0A024R1R8 64 aa19.22■□□□□ 0.67
PMS1-220ENST00000618056 M0QYG6 137 aa19.22■□□□□ 0.67
PMS1-220ENST00000618056 HSPB1P04792 205 aaKnown RBP19.22■□□□□ 0.67
PMS1-220ENST00000618056 IL6RP08887 468 aaPredicted RBP19.22■□□□□ 0.67
PMS1-220ENST00000618056 FGF2P09038 288 aa19.22■□□□□ 0.67
PMS1-220ENST00000618056 HOXD3P31249 432 aaPredicted RBP19.22■□□□□ 0.67
PMS1-220ENST00000618056 RPL27AP46776 148 aaKnown RBP19.22■□□□□ 0.67
PMS1-220ENST00000618056 DEFA1P59665 94 aa19.22■□□□□ 0.67
PMS1-220ENST00000618056 DEFA3P59666 94 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms