RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 ZNF714Q96N38 554 aa13.9□□□□□ -0.19
TRAPPC3-209ENST00000616395 HSD17B10Q99714 261 aaKnown RBP13.9□□□□□ -0.19
TRAPPC3-209ENST00000616395 OR2D2Q9H210 308 aa13.9□□□□□ -0.19
TRAPPC3-209ENST00000616395 IGKV1D-13A0A0B4J2D9 117 aa13.89□□□□□ -0.19
TRAPPC3-209ENST00000616395 IGKV1-13P0DP09 117 aa13.89□□□□□ -0.19
TRAPPC3-209ENST00000616395 PPP1CCP36873 323 aaKnown RBP13.89□□□□□ -0.19
TRAPPC3-209ENST00000616395 GPR12P47775 334 aa13.89□□□□□ -0.19
TRAPPC3-209ENST00000616395 H2BFSP57053 126 aa13.89□□□□□ -0.19
TRAPPC3-209ENST00000616395 LTC4SQ16873 150 aa13.89□□□□□ -0.19
TRAPPC3-209ENST00000616395 ANKRD55Q3KP44 614 aa13.89□□□□□ -0.19
TRAPPC3-209ENST00000616395 MORN2Q502X0 79 aa13.89□□□□□ -0.19
TRAPPC3-209ENST00000616395 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC3-209ENST00000616395 UBALD1Q8TB05 177 aa13.89□□□□□ -0.19
TRAPPC3-209ENST00000616395 FAM212BQ9NTI7 297 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC3-209ENST00000616395 GFOD1Q9NXC2 390 aa13.89□□□□□ -0.19
TRAPPC3-209ENST00000616395 HILPDAQ9Y5L2 63 aa13.89□□□□□ -0.19
TRAPPC3-209ENST00000616395 KIAA2026Q5HYC2 2103 aa13.88□□□□□ -0.19
TRAPPC3-209ENST00000616395 HMSDA8MTL9 139 aa13.88□□□□□ -0.19
TRAPPC3-209ENST00000616395 C17orf98A8MV24 154 aa13.88□□□□□ -0.19
TRAPPC3-209ENST00000616395 UCP1P25874 307 aa13.88□□□□□ -0.19
TRAPPC3-209ENST00000616395 TMEM268Q5VZI3 342 aa13.88□□□□□ -0.19
TRAPPC3-209ENST00000616395 RBPMSQ93062 196 aaKnown RBP13.88□□□□□ -0.19
TRAPPC3-209ENST00000616395 LINC00574Q9H8X3 128 aa13.88□□□□□ -0.19
TRAPPC3-209ENST00000616395 PIPOXQ9P0Z9 390 aa13.88□□□□□ -0.19
TRAPPC3-209ENST00000616395 PRELID3BQ9Y3B1 194 aa13.88□□□□□ -0.19
TRAPPC3-209ENST00000616395 CCSO14618 274 aa13.87□□□□□ -0.19
TRAPPC3-209ENST00000616395 MMP23AO75900 390 aa13.87□□□□□ -0.19
TRAPPC3-209ENST00000616395 NFYBP25208 207 aa13.87□□□□□ -0.19
TRAPPC3-209ENST00000616395 PSMB6P28072 239 aa13.87□□□□□ -0.19
TRAPPC3-209ENST00000616395 KIR2DS2P43631 304 aa13.87□□□□□ -0.19
TRAPPC3-209ENST00000616395 IAH1Q2TAA2 248 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC3-209ENST00000616395 SP6Q3SY56 376 aa13.87□□□□□ -0.19
TRAPPC3-209ENST00000616395 PRAMEF5Q5TYX0 476 aa13.87□□□□□ -0.19
TRAPPC3-209ENST00000616395 ADAMTSL5Q6ZMM2 481 aa13.87□□□□□ -0.19
TRAPPC3-209ENST00000616395 C18orf65Q6ZTR6 163 aa13.87□□□□□ -0.19
TRAPPC3-209ENST00000616395 C8orf86Q6ZUL3 223 aa13.87□□□□□ -0.19
TRAPPC3-209ENST00000616395 DRAM1Q8N682 238 aa13.87□□□□□ -0.19
TRAPPC3-209ENST00000616395 INO80EQ8NBZ0 244 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC3-209ENST00000616395 OR11H6Q8NGC7 330 aa13.87□□□□□ -0.19
TRAPPC3-209ENST00000616395 OR13D1Q8NGV5 346 aa13.87□□□□□ -0.19
TRAPPC3-209ENST00000616395 GLYATL2Q8WU03 294 aa13.87□□□□□ -0.19
TRAPPC3-209ENST00000616395 RRNAD1Q96FB5 475 aaKnown RBP13.87□□□□□ -0.19
TRAPPC3-209ENST00000616395 ADTRPQ96IZ2 230 aa13.87□□□□□ -0.19
TRAPPC3-209ENST00000616395 TMEM56Q96MV1 263 aa13.87□□□□□ -0.19
TRAPPC3-209ENST00000616395 P2RX4Q99571 388 aa13.87□□□□□ -0.19
TRAPPC3-209ENST00000616395 PSG11Q9UQ72 335 aa13.87□□□□□ -0.19
TRAPPC3-209ENST00000616395 GAB2Q9UQC2 676 aa13.87□□□□□ -0.19
TRAPPC3-209ENST00000616395 TMEM56-RWDD3S4R434 201 aa13.87□□□□□ -0.19
TRAPPC3-209ENST00000616395 FXYD6-FXYD2A0A087WZ82 144 aa13.86□□□□□ -0.19
TRAPPC3-209ENST00000616395 IGHV3-43A0A0B4J1X8 118 aa13.86□□□□□ -0.19
TRAPPC3-209ENST00000616395 SH2D7A6NKC9 451 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC3-209ENST00000616395 L7N2F9 121 aa13.86□□□□□ -0.19
TRAPPC3-209ENST00000616395 CDS2O95674 445 aa13.86□□□□□ -0.19
TRAPPC3-209ENST00000616395 CGB3P0DN86 165 aa13.86□□□□□ -0.19
TRAPPC3-209ENST00000616395 CGB7P0DN87 165 aa13.86□□□□□ -0.19
TRAPPC3-209ENST00000616395 IGHV1-8P0DP01 117 aa13.86□□□□□ -0.19
TRAPPC3-209ENST00000616395 IGHV3-43DP0DP04 118 aa13.86□□□□□ -0.19
TRAPPC3-209ENST00000616395 MYCNOSP40205 109 aa13.86□□□□□ -0.19
TRAPPC3-209ENST00000616395 NKX2-5P52952 324 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC3-209ENST00000616395 RPL23AP62750 156 aaKnown RBP13.86□□□□□ -0.19
TRAPPC3-209ENST00000616395 GGNBP1Q5YKI7 109 aa13.86□□□□□ -0.19
TRAPPC3-209ENST00000616395 OR51H1Q8NH63 302 aa13.86□□□□□ -0.19
TRAPPC3-209ENST00000616395 SEC22AQ96IW7 307 aa13.86□□□□□ -0.19
TRAPPC3-209ENST00000616395 TP53RKQ96S44 253 aa13.86□□□□□ -0.19
TRAPPC3-209ENST00000616395 S1PR3Q99500 378 aa13.86□□□□□ -0.19
TRAPPC3-209ENST00000616395 ABHD14AQ9BUJ0 271 aa13.86□□□□□ -0.19
TRAPPC3-209ENST00000616395 GSKIPQ9P0R6 139 aa13.86□□□□□ -0.19
TRAPPC3-209ENST00000616395 HSPB11Q9Y547 144 aa13.86□□□□□ -0.19
TRAPPC3-209ENST00000616395 STARD9Q9P2P6 4700 aa13.85□□□□□ -0.19
TRAPPC3-209ENST00000616395 SMLR1H3BR10 107 aa13.85□□□□□ -0.19
TRAPPC3-209ENST00000616395 RAB29O14966 203 aa13.85□□□□□ -0.19
TRAPPC3-209ENST00000616395 TNFSF12O43508 249 aa13.85□□□□□ -0.19
TRAPPC3-209ENST00000616395 ADAP1O75689 374 aa13.85□□□□□ -0.19
TRAPPC3-209ENST00000616395 SLC25A4P12235 298 aa13.85□□□□□ -0.19
TRAPPC3-209ENST00000616395 VDAC1P21796 283 aa13.85□□□□□ -0.19
TRAPPC3-209ENST00000616395 CD24P25063 80 aa13.85□□□□□ -0.19
TRAPPC3-209ENST00000616395 IL3RAP26951 378 aa13.85□□□□□ -0.19
TRAPPC3-209ENST00000616395 GNMTQ14749 295 aa13.85□□□□□ -0.19
TRAPPC3-209ENST00000616395 C17orf58Q2M2W7 97 aa13.85□□□□□ -0.19
TRAPPC3-209ENST00000616395 HEPN1Q6WQI6 88 aa13.85□□□□□ -0.19
TRAPPC3-209ENST00000616395 C16orf82Q7Z2V1 217 aa13.85□□□□□ -0.19
TRAPPC3-209ENST00000616395 C5orf24Q7Z6I8 188 aa13.85□□□□□ -0.19
TRAPPC3-209ENST00000616395 ZNF546Q86UE3 836 aa13.85□□□□□ -0.19
TRAPPC3-209ENST00000616395 SBSPONQ8IVN8 264 aa13.85□□□□□ -0.19
TRAPPC3-209ENST00000616395 PPP1R1CQ8WVI7 109 aa13.85□□□□□ -0.19
TRAPPC3-209ENST00000616395 TCTEX1D2Q8WW35 142 aa13.85□□□□□ -0.19
TRAPPC3-209ENST00000616395 GON7Q9BXV9 100 aa13.85□□□□□ -0.19
TRAPPC3-209ENST00000616395 CSMD3Q7Z407 3707 aa13.84□□□□□ -0.19
TRAPPC3-209ENST00000616395 A0A0D9SG52 128 aa13.84□□□□□ -0.19
TRAPPC3-209ENST00000616395 PVALBP20472 110 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC3-209ENST00000616395 UTF1Q5T230 341 aa13.84□□□□□ -0.19
TRAPPC3-209ENST00000616395 TMEM65Q6PI78 240 aa13.84□□□□□ -0.19
TRAPPC3-209ENST00000616395 ZNF329Q86UD4 541 aa13.84□□□□□ -0.19
TRAPPC3-209ENST00000616395 DUX3Q96PT4 197 aa13.84□□□□□ -0.19
TRAPPC3-209ENST00000616395 SLA2Q9H6Q3 261 aa13.84□□□□□ -0.19
TRAPPC3-209ENST00000616395 RNF150Q9ULK6 438 aa13.84□□□□□ -0.19
TRAPPC3-209ENST00000616395 PSMB11A5LHX3 300 aa13.83□□□□□ -0.2
TRAPPC3-209ENST00000616395 NUDT19A8MXV4 375 aa13.83□□□□□ -0.2
TRAPPC3-209ENST00000616395 RBP4P02753 201 aa13.83□□□□□ -0.2
TRAPPC3-209ENST00000616395 SLC25A6P12236 298 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms