RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, human

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-223	ENST00000616179	NABP1	Q96AH0	204 aa		13.17	□□□□□ -0.3
SYNRG-223	ENST00000616179	TRAV9-2	A0A087WT02	112 aa		13.17	□□□□□ -0.3
SYNRG-223	ENST00000616179	hDV102S1	A0JD36	115 aa		13.17	□□□□□ -0.3
SYNRG-223	ENST00000616179	LMO7DN	F2Z398	122 aa		13.17	□□□□□ -0.3
SYNRG-223	ENST00000616179	SPINT2	O43291	252 aa		13.17	□□□□□ -0.3
SYNRG-223	ENST00000616179	NEURL1	O76050	574 aa		13.17	□□□□□ -0.3
SYNRG-223	ENST00000616179	CLDN14	O95500	239 aa		13.17	□□□□□ -0.3
SYNRG-223	ENST00000616179	PPOX	P50336	477 aa		13.17	□□□□□ -0.3
SYNRG-223	ENST00000616179	RAC1	P63000	192 aa		13.17	□□□□□ -0.3
SYNRG-223	ENST00000616179	C10orf128	Q5T292	105 aa		13.17	□□□□□ -0.3
SYNRG-223	ENST00000616179	CLEC2A	Q6UVW9	174 aa		13.17	□□□□□ -0.3
SYNRG-223	ENST00000616179	STPG3	Q8N7X2	389 aa		13.17	□□□□□ -0.3
SYNRG-223	ENST00000616179	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	13.17	□□□□□ -0.3
SYNRG-223	ENST00000616179	IL36G	Q9NZH8	169 aa		13.17	□□□□□ -0.3
SYNRG-223	ENST00000616179	OR5B21	A6NL26	309 aa		13.17	□□□□□ -0.3
SYNRG-223	ENST00000616179	CEACAM21	Q3KPI0	293 aa		13.17	□□□□□ -0.3
SYNRG-223	ENST00000616179	SPATA31B1P	Q5VZV4	182 aa		13.17	□□□□□ -0.3
SYNRG-223	ENST00000616179	SSC4D	Q8WTU2	575 aa		13.17	□□□□□ -0.3
SYNRG-223	ENST00000616179	AMY1A	P04745	511 aa		13.16	□□□□□ -0.3
SYNRG-223	ENST00000616179	FAM53A	Q6NSI3	398 aa	Predicted RBP	13.16	□□□□□ -0.3
SYNRG-223	ENST00000616179	MRPL52	Q86TS9	123 aa	Known RBP	13.16	□□□□□ -0.3
SYNRG-223	ENST00000616179	TAAR6	Q96RI8	345 aa		13.16	□□□□□ -0.3
SYNRG-223	ENST00000616179	TP73-AS1	Q9UF72	201 aa		13.16	□□□□□ -0.3
SYNRG-223	ENST00000616179	CACNA1E	Q15878	2313 aa		13.16	□□□□□ -0.3
SYNRG-223	ENST00000616179	MUC21	A0A0G2JKD1	596 aa		13.16	□□□□□ -0.3
SYNRG-223	ENST00000616179	MUC21	A0A140T8X8	626 aa		13.16	□□□□□ -0.3
SYNRG-223	ENST00000616179	OR2H2	O95918	312 aa		13.16	□□□□□ -0.3
SYNRG-223	ENST00000616179	TNXA	Q16473	311 aa		13.16	□□□□□ -0.3
SYNRG-223	ENST00000616179	MUC21	Q5SSG8	566 aa		13.16	□□□□□ -0.3
SYNRG-223	ENST00000616179	RTL8A	Q9BWD3	113 aa		13.16	□□□□□ -0.3
SYNRG-223	ENST00000616179	TWSG1	Q9GZX9	223 aa		13.16	□□□□□ -0.3
SYNRG-223	ENST00000616179	NDUFB8	O95169	186 aa		13.16	□□□□□ -0.3
SYNRG-223	ENST00000616179	TIAF1	O95411	115 aa		13.16	□□□□□ -0.3
SYNRG-223	ENST00000616179	PAX1	P15863	534 aa		13.16	□□□□□ -0.3
SYNRG-223	ENST00000616179	IGFBP4	P22692	258 aa		13.16	□□□□□ -0.3
SYNRG-223	ENST00000616179	GATA2	P23769	480 aa	Predicted RBP	13.16	□□□□□ -0.3
SYNRG-223	ENST00000616179	EAF1	Q96JC9	268 aa	Predicted RBP	13.16	□□□□□ -0.3
SYNRG-223	ENST00000616179	IGHV2OR16-5	A0A0B4J2B6	119 aa		13.15	□□□□□ -0.3
SYNRG-223	ENST00000616179	GAGE12B	A1L429	117 aa		13.15	□□□□□ -0.3
SYNRG-223	ENST00000616179	RAC3	P60763	192 aa		13.15	□□□□□ -0.3
SYNRG-223	ENST00000616179	C12orf54	Q6X4T0	127 aa		13.15	□□□□□ -0.3
SYNRG-223	ENST00000616179	ZNF441	Q8N8Z8	693 aa		13.15	□□□□□ -0.3
SYNRG-223	ENST00000616179	LEPROTL1	O95214	131 aa		13.15	□□□□□ -0.3
SYNRG-223	ENST00000616179	BLNK	Q8WV28	456 aa		13.15	□□□□□ -0.3
SYNRG-223	ENST00000616179	DNASE2B	Q8WZ79	361 aa		13.15	□□□□□ -0.3
SYNRG-223	ENST00000616179	SMIM12	Q96EX1	92 aa		13.15	□□□□□ -0.3
SYNRG-223	ENST00000616179	MS4A5	Q9H3V2	200 aa		13.15	□□□□□ -0.3
SYNRG-223	ENST00000616179	C11orf1	Q9H5F2	150 aa		13.15	□□□□□ -0.3
SYNRG-223	ENST00000616179	TFF1	P04155	84 aa		13.15	□□□□□ -0.3
SYNRG-223	ENST00000616179	BPIFA4P	Q86YQ2	179 aa		13.15	□□□□□ -0.3
SYNRG-223	ENST00000616179	TMEM54	Q969K7	222 aa		13.15	□□□□□ -0.3
SYNRG-223	ENST00000616179	FOXH1	O75593	365 aa		13.14	□□□□□ -0.31
SYNRG-223	ENST00000616179	AARD	Q4LEZ3	155 aa		13.14	□□□□□ -0.31
SYNRG-223	ENST00000616179	CRIP3	Q6Q6R5	217 aa		13.14	□□□□□ -0.31
SYNRG-223	ENST00000616179	TMEM14EP	Q6UXP3	125 aa		13.14	□□□□□ -0.31
SYNRG-223	ENST00000616179	TMEM70	Q9BUB7	260 aa		13.14	□□□□□ -0.31
SYNRG-223	ENST00000616179		A0A087X0K7	114 aa		13.14	□□□□□ -0.31
SYNRG-223	ENST00000616179	TMEM30CP	A0ZSE6	113 aa		13.14	□□□□□ -0.31
SYNRG-223	ENST00000616179	GOSR1	O95249	250 aa		13.14	□□□□□ -0.31
SYNRG-223	ENST00000616179	UBE2L3	P68036	154 aa	Known RBP	13.14	□□□□□ -0.31
SYNRG-223	ENST00000616179	NHLH1	Q02575	133 aa		13.14	□□□□□ -0.31
SYNRG-223	ENST00000616179	MRPL49	Q13405	166 aa	Known RBP	13.14	□□□□□ -0.31
SYNRG-223	ENST00000616179	ZNF585B	Q52M93	769 aa		13.14	□□□□□ -0.31
SYNRG-223	ENST00000616179	S1PR3	Q99500	378 aa		13.14	□□□□□ -0.31
SYNRG-223	ENST00000616179	FAM173A	Q9BQD7	235 aa		13.14	□□□□□ -0.31
SYNRG-223	ENST00000616179	HILPDA	Q9Y5L2	63 aa		13.14	□□□□□ -0.31
SYNRG-223	ENST00000616179	TRAV30	A0A087WSZ9	112 aa		13.14	□□□□□ -0.31
SYNRG-223	ENST00000616179	SH2D7	A6NKC9	451 aa	Predicted RBP	13.14	□□□□□ -0.31
SYNRG-223	ENST00000616179	LINC00869	P0C866	280 aa		13.14	□□□□□ -0.31
SYNRG-223	ENST00000616179	PLP1	P60201	277 aa		13.14	□□□□□ -0.31
SYNRG-223	ENST00000616179		Q6ZPA2	131 aa		13.14	□□□□□ -0.31
SYNRG-223	ENST00000616179	SPSB4	Q96A44	273 aa		13.14	□□□□□ -0.31
SYNRG-223	ENST00000616179	CLEC1B	Q9P126	229 aa		13.14	□□□□□ -0.31
SYNRG-223	ENST00000616179	POLDIP2	Q9Y2S7	368 aa		13.14	□□□□□ -0.31
SYNRG-223	ENST00000616179	YTHDF2	Q9Y5A9	579 aa	Known RBP	13.14	□□□□□ -0.31
SYNRG-223	ENST00000616179	TRAV24	A0A0B4J272	114 aa		13.13	□□□□□ -0.31
SYNRG-223	ENST00000616179	FAM90A26	D6RGX4	464 aa		13.13	□□□□□ -0.31
SYNRG-223	ENST00000616179	NPY1R	P25929	384 aa		13.13	□□□□□ -0.31
SYNRG-223	ENST00000616179	CD27	P26842	260 aa		13.13	□□□□□ -0.31
SYNRG-223	ENST00000616179	CCR5	P51681	352 aa		13.13	□□□□□ -0.31
SYNRG-223	ENST00000616179	TEPP	Q6URK8	271 aa		13.13	□□□□□ -0.31
SYNRG-223	ENST00000616179	TSKU	Q8WUA8	353 aa		13.13	□□□□□ -0.31
SYNRG-223	ENST00000616179	IGLL1	P15814	213 aa		13.13	□□□□□ -0.31
SYNRG-223	ENST00000616179	CRYGS	P22914	178 aa		13.13	□□□□□ -0.31
SYNRG-223	ENST00000616179	TAS2R45	P59539	299 aa		13.13	□□□□□ -0.31
SYNRG-223	ENST00000616179	SAP30L	Q9HAJ7	183 aa		13.13	□□□□□ -0.31
SYNRG-223	ENST00000616179	FZR1	Q9UM11	496 aa		13.13	□□□□□ -0.31
SYNRG-223	ENST00000616179	YPEL3	P61236	119 aa	Predicted RBP	13.13	□□□□□ -0.31
SYNRG-223	ENST00000616179	TM4SF20	Q53R12	229 aa		13.13	□□□□□ -0.31
SYNRG-223	ENST00000616179	SEPSECS	Q9HD40	501 aa	Known RBP	13.13	□□□□□ -0.31
SYNRG-223	ENST00000616179	RNF114	Q9Y508	228 aa		13.13	□□□□□ -0.31
SYNRG-223	ENST00000616179	PLAU	P00749	431 aa		13.13	□□□□□ -0.31
SYNRG-223	ENST00000616179	HOXC12	P31275	282 aa		13.13	□□□□□ -0.31
SYNRG-223	ENST00000616179	RPL30	P62888	115 aa	Known RBP	13.13	□□□□□ -0.31
SYNRG-223	ENST00000616179	PCSK4	Q6UW60	755 aa		13.13	□□□□□ -0.31
SYNRG-223	ENST00000616179	MOB1B	Q7L9L4	216 aa		13.13	□□□□□ -0.31
SYNRG-223	ENST00000616179	CDC42EP3	Q9UKI2	254 aa		13.13	□□□□□ -0.31
SYNRG-223	ENST00000616179	IGHV1-69-2	A0A0G2JMI3	117 aa		13.12	□□□□□ -0.31
SYNRG-223	ENST00000616179	LIF	P15018	202 aa		13.12	□□□□□ -0.31
SYNRG-223	ENST00000616179	ZNF826P	Q6ZT77	177 aa		13.12	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms