RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 DPPA3Q6W0C5 159 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 C1orf162Q8NEQ5 155 aaPredicted RBP4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 HSPB7Q9UBY9 170 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 PITPNC1Q9UKF7 332 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 TRBV6-6A0A0A6YYG2 114 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 SCGB1D1O95968 90 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 HNF1AP20823 631 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 RPL30P62888 115 aaKnown RBP4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 VMA21Q3ZAQ7 101 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 ACSM6Q6P461 480 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 PQLC2Q6ZP29 291 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 Q6ZSR3 168 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 ZNF331Q9NQX6 463 aaPredicted RBP4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 SPRR3Q9UBC9 169 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 MLNRO43193 412 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 HSBP1O75506 76 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 CNIH1O95406 144 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 OR10J1P30954 320 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 CDX1P47902 265 aaPredicted RBP4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 FAM3BP58499 235 aaPredicted RBP4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 UBE2L3P68036 154 aaKnown RBP4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 LRRC10Q5BKY1 277 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 ZCCHC24Q8N2G6 241 aaKnown RBP4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 DAZAP1Q96EP5 407 aaKnown RBP4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 LURAP1Q96LR2 239 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 PXMP4Q9Y6I8 212 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 DYSFO75923 2080 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 ARL16Q0P5N6 197 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 PSG5Q15238 335 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 RPL39P5Q59GN2 51 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 SPSB3Q6PJ21 355 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 TMEM14EPQ6UXP3 125 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 ZNF497Q6ZNH5 498 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 ZNF645Q8N7E2 425 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 MBD3L1Q8WWY6 194 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 FUT9Q9Y231 359 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 TRAV1-1A0A0B4J248 108 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 PTBP3O95758 552 aaKnown RBP4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 UBE2G1P62253 170 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 SSX2Q16385 188 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 LEMD1Q68G75 181 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 PRR27Q6MZM9 219 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 C12orf54Q6X4T0 127 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 OR1L8Q8NGR8 309 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 MEGF10Q96KG7 1140 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 RBFOX2O43251 390 aaKnown RBP eCLIP4.72□□□□□ -1.657e-6■□□□□ 8.9
SYNCRIP-204ENST00000616122 RAMP3O60896 148 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 TRGC1P0CF51 173 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 HABP2Q14520 560 aaPredicted RBP4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 CLDND2Q8NHS1 167 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 FLYWCH2Q96CP2 140 aaKnown RBP4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 COQ2Q96H96 371 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 PCGF1Q9BSM1 259 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 MANBALQ9NQG1 85 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 METTL1Q9UBP6 276 aaKnown RBP4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 ATXN7O15265 892 aaPredicted RBP4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 AGAP20933 346 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 GALR1P47211 349 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 HES1Q14469 280 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 FAM53AQ6NSI3 398 aaPredicted RBP4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 CMTM2Q8TAZ6 248 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 ZDHHC16Q969W1 377 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 PACRGQ96M98 296 aaPredicted RBP4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 NAT8BQ9UHF3 227 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 RPH3ALQ9UNE2 315 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 PPIAL4EA0A075B759 164 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 XKRY2A2RUG3 117 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 PPIAL4DF5H284 164 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 PPIAL4FP0DN26 164 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 LGALS4P56470 323 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 LINC00205P59089 165 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 PEAR1Q5VY43 1037 aaPredicted RBP4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 TMEM204Q9BSN7 226 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 PPIAL4AQ9Y536 164 aa4.72□□□□□ -1.65
SYNCRIP-204ENST00000616122 NTF3P20783 257 aa4.71□□□□□ -1.65
SYNCRIP-204ENST00000616122 AMTP48728 403 aa4.71□□□□□ -1.65
SYNCRIP-204ENST00000616122 THBS3P49746 956 aa4.71□□□□□ -1.65
SYNCRIP-204ENST00000616122 TCL1AP56279 114 aa4.71□□□□□ -1.65
SYNCRIP-204ENST00000616122 ERVK11-1P61568 191 aa4.71□□□□□ -1.65
SYNCRIP-204ENST00000616122 ICAM4Q14773 271 aa4.71□□□□□ -1.65
SYNCRIP-204ENST00000616122 SRSF7Q16629 238 aaKnown RBP eCLIP4.71□□□□□ -1.65
SYNCRIP-204ENST00000616122 MS4A10Q96PG2 267 aa4.71□□□□□ -1.65
SYNCRIP-204ENST00000616122 SPRY4Q9C004 299 aa4.71□□□□□ -1.65
SYNCRIP-204ENST00000616122 PRO1933Q9H354 126 aa4.71□□□□□ -1.65
SYNCRIP-204ENST00000616122 TECRQ9NZ01 308 aaKnown RBP4.71□□□□□ -1.65
SYNCRIP-204ENST00000616122 TGIF2-C20orf24A0A0A6YYL0 155 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 SS18L1O75177 396 aaPredicted RBP4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 CT45A6P0DMU7 189 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 CT45A5P0DMU8 189 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 CT45A7P0DMV0 189 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 CT45A1Q5HYN5 189 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 Q5PR19 223 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 Q6P435 159 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 CT45A3Q8NHU0 189 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 VSIRQ9H7M9 311 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 SDF2L1Q9HCN8 221 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 RNF115Q9Y4L5 304 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 IGKV1-39P01597 117 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 IGHG3P01860 377 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 IGKV1D-39P04432 117 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms